Protein–RNA interactions for Protein: O43731

KDELR3, ER lumen protein-retaining receptor 3, humanhuman

Predictions only

Length 214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDELR3O43731 AC011477.7-201ENST00000617163 1440 ntBASIC13.56□□□□□ -0.24
KDELR3O43731 POC5-202ENST00000428202 2229 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
KDELR3O43731 AL512306.2-201ENST00000444037 2219 ntTSL 2 BASIC13.56□□□□□ -0.24
KDELR3O43731 DNM2-204ENST00000408974 3013 ntAPPRIS ALT1 TSL 2 BASIC13.56□□□□□ -0.24
KDELR3O43731 SERPING1-203ENST00000378323 1733 ntAPPRIS ALT2 TSL 2 BASIC13.56□□□□□ -0.24
KDELR3O43731 PSMC5-212ENST00000581882 1474 ntTSL 5 BASIC13.56□□□□□ -0.24
KDELR3O43731 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
KDELR3O43731 SLC4A7-213ENST00000454389 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
KDELR3O43731 AP000347.1-201ENST00000417194 5004 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
KDELR3O43731 OPRL1-203ENST00000355631 3147 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
KDELR3O43731 DNMT3B-204ENST00000353855 4237 ntTSL 5 BASIC13.56□□□□□ -0.24
KDELR3O43731 DMBX1-201ENST00000360032 2880 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
KDELR3O43731 FPR2-203ENST00000598953 1544 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
KDELR3O43731 TRPV6-201ENST00000359396 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
KDELR3O43731 DDX12P-201ENST00000432996 2947 ntBASIC13.56□□□□□ -0.24
KDELR3O43731 TTC4-201ENST00000371281 2395 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
KDELR3O43731 PSMB4-201ENST00000290541 964 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
KDELR3O43731 MRPL43-202ENST00000318325 2134 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
KDELR3O43731 KRTAP10-11-201ENST00000334670 1237 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
KDELR3O43731 RHCE-203ENST00000346452 971 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
KDELR3O43731 S100A3-202ENST00000368713 856 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
KDELR3O43731 PLA2G2E-201ENST00000375116 785 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
KDELR3O43731 KRTAP4-12-201ENST00000394014 1077 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
KDELR3O43731 CHCHD2-201ENST00000395422 901 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
KDELR3O43731 SYCE3-201ENST00000402753 342 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
KDELR3O43731 RPS7-202ENST00000403564 764 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
KDELR3O43731 Z97652.1-201ENST00000415176 329 ntTSL 5 BASIC13.56□□□□□ -0.24
KDELR3O43731 PHBP10-201ENST00000416467 784 ntBASIC13.56□□□□□ -0.24
KDELR3O43731 AP001092.1-201ENST00000433606 469 ntTSL 3 BASIC13.56□□□□□ -0.24
KDELR3O43731 RPL13AP19-201ENST00000434320 584 ntBASIC13.56□□□□□ -0.24
KDELR3O43731 NRADDP-201ENST00000437305 691 ntBASIC13.56□□□□□ -0.24
KDELR3O43731 AC114781.1-201ENST00000450559 1028 ntBASIC13.56□□□□□ -0.24
KDELR3O43731 VTI1BP1-201ENST00000486325 700 ntBASIC13.56□□□□□ -0.24
KDELR3O43731 AC092656.1-202ENST00000515843 998 ntTSL 4 BASIC13.56□□□□□ -0.24
KDELR3O43731 FAM86B3P-203ENST00000523992 854 ntBASIC13.56□□□□□ -0.24
KDELR3O43731 RPS25-202ENST00000527673 835 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
KDELR3O43731 CYB561A3-208ENST00000536915 1094 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
KDELR3O43731 PHBP18-201ENST00000546648 813 ntBASIC13.56□□□□□ -0.24
KDELR3O43731 MKRN3-202ENST00000564592 629 ntTSL 3 BASIC13.56□□□□□ -0.24
KDELR3O43731 SEPT4-AS1-203ENST00000580769 1000 ntTSL 3 BASIC13.56□□□□□ -0.24
KDELR3O43731 AC061992.1-201ENST00000592569 777 ntTSL 3 BASIC13.56□□□□□ -0.24
KDELR3O43731 LAMTOR5-AS1-209ENST00000597455 805 ntBASIC13.56□□□□□ -0.24
KDELR3O43731 AL451165.2-201ENST00000606971 718 ntTSL 2 BASIC13.56□□□□□ -0.24
KDELR3O43731 PROX1-AS1-235ENST00000628896 711 ntTSL 5 BASIC13.56□□□□□ -0.24
KDELR3O43731 GRSF1-201ENST00000254799 6666 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
KDELR3O43731 ZNF384-201ENST00000319770 3266 ntTSL 2 BASIC13.56□□□□□ -0.24
KDELR3O43731 THUMPD3-AS1-202ENST00000468186 3253 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
KDELR3O43731 SAP30BP-202ENST00000355423 2439 ntTSL 2 BASIC13.56□□□□□ -0.24
KDELR3O43731 EFR3B-205ENST00000405108 2432 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
KDELR3O43731 RGS6-202ENST00000355512 1564 ntAPPRIS ALT1 TSL 1 (best) BASIC13.56□□□□□ -0.24
KDELR3O43731 FAM183BP-201ENST00000409072 1595 ntBASIC13.56□□□□□ -0.24
KDELR3O43731 TUBGCP3-201ENST00000261965 3899 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
KDELR3O43731 AC092143.1-201ENST00000556922 2776 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
KDELR3O43731 AL121992.1-201ENST00000428945 2845 ntTSL 2 BASIC13.56□□□□□ -0.24
KDELR3O43731 LRRC8C-201ENST00000370454 7218 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
KDELR3O43731 GTF2IRD2B-203ENST00000472837 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
KDELR3O43731 TREH-202ENST00000397925 1718 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
KDELR3O43731 EFHB-202ENST00000344838 2389 ntAPPRIS ALT2 TSL 2 BASIC13.56□□□□□ -0.24
KDELR3O43731 CENPL-202ENST00000356198 2357 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
KDELR3O43731 NSF-201ENST00000398238 3983 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
KDELR3O43731 FHOD3-207ENST00000591635 3035 ntTSL 5 BASIC13.56□□□□□ -0.24
KDELR3O43731 KIRREL1-204ENST00000368173 7519 ntTSL 2 BASIC13.55□□□□□ -0.24
KDELR3O43731 ZNF800-203ENST00000393313 4358 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
KDELR3O43731 MAT2B-204ENST00000518095 3409 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
KDELR3O43731 KLHL9-201ENST00000359039 5710 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
KDELR3O43731 KRT8P5-201ENST00000592443 1458 ntBASIC13.55□□□□□ -0.24
KDELR3O43731 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
KDELR3O43731 AL031728.1-201ENST00000449034 2479 ntTSL 3 BASIC13.55□□□□□ -0.24
KDELR3O43731 IKZF1-206ENST00000359197 3487 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
KDELR3O43731 IL2RG-203ENST00000374202 1534 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
KDELR3O43731 PPP5D1-201ENST00000414155 1882 ntAPPRIS P5 TSL 2 BASIC13.55□□□□□ -0.24
KDELR3O43731 SATB2-211ENST00000614512 4972 ntTSL 5 BASIC13.55□□□□□ -0.24
KDELR3O43731 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC13.55□□□□□ -0.24
KDELR3O43731 ARSG-209ENST00000621439 2599 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
KDELR3O43731 NCSTN-201ENST00000294785 2936 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
KDELR3O43731 DNMT3B-202ENST00000328111 4336 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
KDELR3O43731 VTI1B-204ENST00000554659 5351 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
KDELR3O43731 DCAF13-201ENST00000297579 2642 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
KDELR3O43731 APBB1-201ENST00000299402 2636 ntAPPRIS P3 TSL 5 BASIC13.55□□□□□ -0.24
KDELR3O43731 NECAP2-202ENST00000443980 1929 ntTSL 2 BASIC13.55□□□□□ -0.24
KDELR3O43731 SLC44A3-209ENST00000532427 1912 ntTSL 2 BASIC13.55□□□□□ -0.24
KDELR3O43731 CLCN7-201ENST00000262318 3717 ntTSL 5 BASIC13.55□□□□□ -0.24
KDELR3O43731 CPT1B-202ENST00000360719 2319 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
KDELR3O43731 OTOS-201ENST00000319460 566 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
KDELR3O43731 SCGB1C1-201ENST00000342878 431 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
KDELR3O43731 LST1-204ENST00000376086 554 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
KDELR3O43731 OR10N1P-201ENST00000392758 869 ntBASIC13.55□□□□□ -0.24
KDELR3O43731 RBM14-204ENST00000409738 372 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
KDELR3O43731 AC098820.2-201ENST00000457694 666 ntTSL 5 BASIC13.55□□□□□ -0.24
KDELR3O43731 AC004969.1-201ENST00000471553 578 ntTSL 5 BASIC13.55□□□□□ -0.24
KDELR3O43731 RN7SL288P-201ENST00000490496 291 ntBASIC13.55□□□□□ -0.24
KDELR3O43731 MRPS36-204ENST00000512880 1200 ntTSL 5 BASIC13.55□□□□□ -0.24
KDELR3O43731 RNA5SP420-201ENST00000516997 137 ntBASIC13.55□□□□□ -0.24
KDELR3O43731 OR4A49P-201ENST00000527050 632 ntBASIC13.55□□□□□ -0.24
KDELR3O43731 HIST2H2BF-204ENST00000545683 999 ntTSL 2 BASIC13.55□□□□□ -0.24
KDELR3O43731 AC012146.4-201ENST00000575546 271 ntBASIC13.55□□□□□ -0.24
KDELR3O43731 METTL23-211ENST00000589977 617 ntTSL 3 BASIC13.55□□□□□ -0.24
KDELR3O43731 ZNF737-204ENST00000596797 569 ntTSL 4 BASIC13.55□□□□□ -0.24
KDELR3O43731 MRPS36-205ENST00000602380 1200 ntTSL 2 BASIC13.55□□□□□ -0.24
KDELR3O43731 MDC1-209ENST00000613547 830 ntTSL 5 BASIC13.55□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 58.5 ms