Protein–RNA interactions for Protein: Q9GZM3

POLR2J2, DNA-directed RNA polymerase II subunit RPB11-b1, humanhuman

Known RBP Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J2Q9GZM3 AC007336.3-201ENST00000623886 2160 ntBASIC12.5□□□□□ -0.41
POLR2J2Q9GZM3 MPP4-203ENST00000396886 2250 ntTSL 2 BASIC12.5□□□□□ -0.41
POLR2J2Q9GZM3 MMD2-203ENST00000406755 2372 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
POLR2J2Q9GZM3 IP6K3-201ENST00000293756 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
POLR2J2Q9GZM3 ATP13A2-203ENST00000452699 3981 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
POLR2J2Q9GZM3 ITPRIP-201ENST00000278071 6807 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
POLR2J2Q9GZM3 POC1B-GALNT4-202ENST00000548729 5436 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
POLR2J2Q9GZM3 NCDN-203ENST00000373253 3677 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
POLR2J2Q9GZM3 BNIP3L-201ENST00000380629 3610 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
POLR2J2Q9GZM3 CCDC3-202ENST00000378839 3180 ntAPPRIS ALT2 TSL 2 BASIC12.49□□□□□ -0.41
POLR2J2Q9GZM3 S1PR1-201ENST00000305352 2909 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
POLR2J2Q9GZM3 ABCA2-202ENST00000341511 8063 ntAPPRIS P2 TSL 5 BASIC12.49□□□□□ -0.41
POLR2J2Q9GZM3 FAM156B-201ENST00000416841 2537 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
POLR2J2Q9GZM3 C1orf109-201ENST00000358011 2355 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
POLR2J2Q9GZM3 BEND6-202ENST00000370746 2379 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
POLR2J2Q9GZM3 BTNL8-201ENST00000231229 2229 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
POLR2J2Q9GZM3 SLC25A35-203ENST00000579192 2136 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
POLR2J2Q9GZM3 COASY-202ENST00000421097 2071 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
POLR2J2Q9GZM3 AC092902.2-210ENST00000468859 1996 ntTSL 2 BASIC12.49□□□□□ -0.41
POLR2J2Q9GZM3 ARHGEF9-226ENST00000636392 1920 ntTSL 5 BASIC12.49□□□□□ -0.41
POLR2J2Q9GZM3 ZCRB1-201ENST00000266529 1827 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
POLR2J2Q9GZM3 AMHR2-204ENST00000550311 1787 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
POLR2J2Q9GZM3 HOPX-202ENST00000337881 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
POLR2J2Q9GZM3 MRPS9-201ENST00000258455 1500 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
POLR2J2Q9GZM3 AKNA-201ENST00000223791 4414 ntAPPRIS ALT2 TSL 2 BASIC12.49□□□□□ -0.41
POLR2J2Q9GZM3 APOL2-203ENST00000451256 1421 ntAPPRIS ALT2 TSL 2 BASIC12.49□□□□□ -0.41
POLR2J2Q9GZM3 REST-208ENST00000619101 7114 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
POLR2J2Q9GZM3 FSTL1-202ENST00000424703 1396 ntTSL 2 BASIC12.49□□□□□ -0.41
POLR2J2Q9GZM3 RHOXF1-201ENST00000217999 769 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
POLR2J2Q9GZM3 TPI1P3-201ENST00000335020 740 ntBASIC12.49□□□□□ -0.41
POLR2J2Q9GZM3 RPL3P2-204ENST00000413027 1203 ntBASIC12.49□□□□□ -0.41
POLR2J2Q9GZM3 LINC01352-201ENST00000431347 962 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
POLR2J2Q9GZM3 PTPA-217ENST00000434095 870 ntTSL 2 BASIC12.49□□□□□ -0.41
POLR2J2Q9GZM3 AC026320.2-201ENST00000434379 478 ntBASIC12.49□□□□□ -0.41
POLR2J2Q9GZM3 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
POLR2J2Q9GZM3 AL080250.1-201ENST00000438676 445 ntTSL 5 BASIC12.49□□□□□ -0.41
POLR2J2Q9GZM3 RPS2P32-201ENST00000439199 892 ntBASIC12.49□□□□□ -0.41
POLR2J2Q9GZM3 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC12.49□□□□□ -0.41
POLR2J2Q9GZM3 RN7SL767P-201ENST00000493013 295 ntBASIC12.49□□□□□ -0.41
POLR2J2Q9GZM3 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
POLR2J2Q9GZM3 AC104561.3-201ENST00000518590 715 ntTSL 5 BASIC12.49□□□□□ -0.41
POLR2J2Q9GZM3 SAA2-206ENST00000530400 323 ntTSL 3 BASIC12.49□□□□□ -0.41
POLR2J2Q9GZM3 PPFIBP1-204ENST00000535047 875 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
POLR2J2Q9GZM3 SOCS2-AS1-204ENST00000551626 618 ntTSL 4 BASIC12.49□□□□□ -0.41
POLR2J2Q9GZM3 TNNI1-205ENST00000555948 580 ntTSL 5 BASIC12.49□□□□□ -0.41
POLR2J2Q9GZM3 AL161670.2-201ENST00000557650 1227 ntBASIC12.49□□□□□ -0.41
POLR2J2Q9GZM3 AC107871.2-202ENST00000563057 396 ntTSL 2 BASIC12.49□□□□□ -0.41
POLR2J2Q9GZM3 ZNF571-AS1-204ENST00000587121 822 ntTSL 3 BASIC12.49□□□□□ -0.41
POLR2J2Q9GZM3 ATF7-212ENST00000591397 860 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
POLR2J2Q9GZM3 STAG3L1-204ENST00000619870 1192 ntTSL 2 BASIC12.49□□□□□ -0.41
POLR2J2Q9GZM3 KRTAP10-4-203ENST00000622352 1244 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
POLR2J2Q9GZM3 FAM230B-208ENST00000451257 3566 ntTSL 5 BASIC12.49□□□□□ -0.41
POLR2J2Q9GZM3 STOX2-201ENST00000308497 10458 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
POLR2J2Q9GZM3 VMP1-201ENST00000262291 2712 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
POLR2J2Q9GZM3 SLC12A6-205ENST00000458406 4425 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
POLR2J2Q9GZM3 MRVI1-216ENST00000547195 6155 ntTSL 2 BASIC12.49□□□□□ -0.41
POLR2J2Q9GZM3 KIAA1958-202ENST00000374244 2643 ntAPPRIS ALT1 TSL 5 BASIC12.49□□□□□ -0.41
POLR2J2Q9GZM3 CNKSR2-207ENST00000543067 4355 ntTSL 2 BASIC12.49□□□□□ -0.41
POLR2J2Q9GZM3 MPHOSPH10-201ENST00000244230 2484 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
POLR2J2Q9GZM3 ZNF771-204ENST00000566625 2415 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
POLR2J2Q9GZM3 TTC4-201ENST00000371281 2395 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
POLR2J2Q9GZM3 ZNF667-201ENST00000292069 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
POLR2J2Q9GZM3 AC018445.4-201ENST00000624066 2291 ntBASIC12.49□□□□□ -0.41
POLR2J2Q9GZM3 STXBP5L-201ENST00000273666 9496 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
POLR2J2Q9GZM3 KCNN1-201ENST00000222249 3625 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
POLR2J2Q9GZM3 PNMA3-203ENST00000619635 3627 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
POLR2J2Q9GZM3 TROVE2-206ENST00000400968 2143 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
POLR2J2Q9GZM3 SLC5A11-203ENST00000449109 2069 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
POLR2J2Q9GZM3 MED16-204ENST00000395808 3420 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
POLR2J2Q9GZM3 TNRC6B-203ENST00000402203 3444 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
POLR2J2Q9GZM3 GLO1-201ENST00000373365 2012 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
POLR2J2Q9GZM3 GLB1L-203ENST00000409640 2042 ntTSL 2 BASIC12.49□□□□□ -0.41
POLR2J2Q9GZM3 AC068580.3-201ENST00000449248 2015 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
POLR2J2Q9GZM3 CNKSR3-204ENST00000479339 2023 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
POLR2J2Q9GZM3 AL356130.1-201ENST00000620188 1965 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
POLR2J2Q9GZM3 AC104590.1-202ENST00000558368 1921 ntBASIC12.49□□□□□ -0.41
POLR2J2Q9GZM3 BIVM-202ENST00000448849 3198 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
POLR2J2Q9GZM3 TRIM60-201ENST00000341062 1867 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
POLR2J2Q9GZM3 C16orf45-209ENST00000566490 1854 ntTSL 5 BASIC12.48□□□□□ -0.41
POLR2J2Q9GZM3 BAHCC1-201ENST00000307745 10342 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
POLR2J2Q9GZM3 IP6K2-201ENST00000328631 1775 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
POLR2J2Q9GZM3 GFI1B-202ENST00000372122 1797 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
POLR2J2Q9GZM3 ZFYVE27-201ENST00000337540 2927 ntTSL 2 BASIC12.48□□□□□ -0.41
POLR2J2Q9GZM3 MAX-212ENST00000555932 1673 ntTSL 5 BASIC12.48□□□□□ -0.41
POLR2J2Q9GZM3 CPT1C-217ENST00000598293 2767 ntAPPRIS P3 TSL 2 BASIC12.48□□□□□ -0.41
POLR2J2Q9GZM3 RIMS1-201ENST00000264839 7055 ntTSL 5 BASIC12.48□□□□□ -0.41
POLR2J2Q9GZM3 MME-204ENST00000462745 3590 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
POLR2J2Q9GZM3 PDHB-201ENST00000302746 1527 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
POLR2J2Q9GZM3 EFHD1-204ENST00000410095 1538 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
POLR2J2Q9GZM3 SMARCA2-254ENST00000636903 2471 ntTSL 5 BASIC12.48□□□□□ -0.41
POLR2J2Q9GZM3 PAX5-204ENST00000377852 1472 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
POLR2J2Q9GZM3 CTAGE10P-201ENST00000318353 2408 ntBASIC12.48□□□□□ -0.41
POLR2J2Q9GZM3 ITFG2-201ENST00000228799 2361 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
POLR2J2Q9GZM3 ATF4-202ENST00000396680 1419 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
POLR2J2Q9GZM3 RERE-201ENST00000337907 8026 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
POLR2J2Q9GZM3 CHRNA7-223ENST00000637033 3204 ntTSL 5 BASIC12.48□□□□□ -0.41
POLR2J2Q9GZM3 MPP2-219ENST00000612133 4938 ntTSL 5 BASIC12.48□□□□□ -0.41
POLR2J2Q9GZM3 YTHDF3-201ENST00000517371 3122 ntTSL 3 BASIC12.48□□□□□ -0.41
POLR2J2Q9GZM3 CYP24A1-203ENST00000395955 2227 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
POLR2J2Q9GZM3 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC12.48□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 56 ms