Protein–RNA interactions for Protein: P42898

MTHFR, Methylenetetrahydrofolate reductase, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFRP42898 CDH1-201ENST00000261769 4889 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
MTHFRP42898 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
MTHFRP42898 AC012184.2-203ENST00000443119 2110 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
MTHFRP42898 IGF2-203ENST00000381395 4527 ntAPPRIS P2 TSL 2 BASIC14.05□□□□□ -0.16
MTHFRP42898 FKBP9-214ENST00000538336 3621 ntTSL 2 BASIC14.05□□□□□ -0.16
MTHFRP42898 PHF8-202ENST00000338154 6062 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
MTHFRP42898 EP400NL-206ENST00000446190 3697 ntTSL 2 BASIC14.05□□□□□ -0.16
MTHFRP42898 SLC9A3P3-201ENST00000457608 2229 ntBASIC14.05□□□□□ -0.16
MTHFRP42898 E2F7-201ENST00000322886 5740 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
MTHFRP42898 INO80C-202ENST00000334598 974 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
MTHFRP42898 FTHL17-201ENST00000359202 813 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
MTHFRP42898 ZWINT-202ENST00000361148 807 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
MTHFRP42898 MANEA-202ENST00000369293 1076 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
MTHFRP42898 RBP4-203ENST00000371469 814 ntTSL 5 BASIC14.05□□□□□ -0.16
MTHFRP42898 PAX5-203ENST00000377847 996 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
MTHFRP42898 PHACTR1-203ENST00000379335 943 ntTSL 2 BASIC14.05□□□□□ -0.16
MTHFRP42898 KRTAP12-1-201ENST00000391617 588 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
MTHFRP42898 AC096536.3-201ENST00000415336 575 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
MTHFRP42898 GRP-202ENST00000420468 579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
MTHFRP42898 AL353653.1-201ENST00000452336 638 ntTSL 2 BASIC14.05□□□□□ -0.16
MTHFRP42898 AL662899.2-201ENST00000503322 1266 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
MTHFRP42898 PAX5-213ENST00000523145 830 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
MTHFRP42898 PIGCP1-201ENST00000527583 895 ntBASIC14.05□□□□□ -0.16
MTHFRP42898 CSRP2-207ENST00000552330 910 ntTSL 3 BASIC14.05□□□□□ -0.16
MTHFRP42898 BCL2L2-PABPN1-201ENST00000553781 1241 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
MTHFRP42898 PEX11A-204ENST00000561224 529 ntTSL 4 BASIC14.05□□□□□ -0.16
MTHFRP42898 CDC37P2-201ENST00000562287 1029 ntBASIC14.05□□□□□ -0.16
MTHFRP42898 SULT1A3-206ENST00000563322 906 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
MTHFRP42898 SULT1A4-204ENST00000565290 906 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
MTHFRP42898 LIMD2-210ENST00000582055 509 ntTSL 2 BASIC14.05□□□□□ -0.16
MTHFRP42898 NRSN2-206ENST00000608736 712 ntTSL 3 BASIC14.05□□□□□ -0.16
MTHFRP42898 CR392039.2-201ENST00000623182 509 ntBASIC14.05□□□□□ -0.16
MTHFRP42898 ERAS-202ENST00000636362 826 ntAPPRIS P1 TSL 3 BASIC14.05□□□□□ -0.16
MTHFRP42898 ATP1B3-201ENST00000286371 1811 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
MTHFRP42898 AC027612.1-201ENST00000445234 2395 ntBASIC14.05□□□□□ -0.16
MTHFRP42898 AC015802.6-201ENST00000640006 5654 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
MTHFRP42898 AC131212.3-201ENST00000624087 4219 ntBASIC14.05□□□□□ -0.16
MTHFRP42898 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
MTHFRP42898 FAM156A-221ENST00000622447 3757 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
MTHFRP42898 MINDY1-207ENST00000622754 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
MTHFRP42898 AGRN-201ENST00000379370 7323 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
MTHFRP42898 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
MTHFRP42898 ACAN-202ENST00000439576 8840 ntAPPRIS P2 TSL 5 BASIC14.05□□□□□ -0.16
MTHFRP42898 DDX31-204ENST00000372159 4577 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
MTHFRP42898 KDM2B-202ENST00000377071 4595 ntAPPRIS P4 TSL 1 (best) BASIC14.05□□□□□ -0.16
MTHFRP42898 DMPK-219ENST00000600757 3357 ntTSL 2 BASIC14.05□□□□□ -0.16
MTHFRP42898 PRAME-214ENST00000543184 2758 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
MTHFRP42898 CDIP1-205ENST00000563332 2774 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
MTHFRP42898 FAM213A-205ENST00000606162 5859 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
MTHFRP42898 SMC5-201ENST00000361138 5980 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
MTHFRP42898 ARRDC5-201ENST00000381781 1638 ntAPPRIS P1 TSL 3 BASIC14.04□□□□□ -0.16
MTHFRP42898 SPAG8-202ENST00000396638 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
MTHFRP42898 ARHGEF37-201ENST00000333677 4968 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
MTHFRP42898 EFHB-202ENST00000344838 2389 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
MTHFRP42898 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC14.04□□□□□ -0.16
MTHFRP42898 IKZF1-205ENST00000357364 5925 ntTSL 5 BASIC14.04□□□□□ -0.16
MTHFRP42898 DCAF13-209ENST00000616836 2639 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
MTHFRP42898 ZBTB7B-202ENST00000368426 3594 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
MTHFRP42898 EML4-203ENST00000402711 3568 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
MTHFRP42898 ZBTB20-215ENST00000481632 2800 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
MTHFRP42898 PLEKHG6-201ENST00000011684 2881 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
MTHFRP42898 MYD88-201ENST00000396334 2850 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
MTHFRP42898 ERICH6-201ENST00000295910 2052 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
MTHFRP42898 AC008080.1-201ENST00000311067 1058 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
MTHFRP42898 CKS2-201ENST00000314355 613 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
MTHFRP42898 FUNDC1-201ENST00000378045 1196 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
MTHFRP42898 PIGL-202ENST00000395844 1257 ntTSL 5 BASIC14.04□□□□□ -0.16
MTHFRP42898 AC093106.1-201ENST00000437271 352 ntBASIC14.04□□□□□ -0.16
MTHFRP42898 AC103563.2-201ENST00000442200 597 ntTSL 5 BASIC14.04□□□□□ -0.16
MTHFRP42898 RAB34-211ENST00000450529 1184 ntTSL 2 BASIC14.04□□□□□ -0.16
MTHFRP42898 AC004889.1-201ENST00000498693 856 ntTSL 5 BASIC14.04□□□□□ -0.16
MTHFRP42898 AC114812.4-201ENST00000506676 757 ntBASIC14.04□□□□□ -0.16
MTHFRP42898 CCNL2P1-201ENST00000512846 969 ntBASIC14.04□□□□□ -0.16
MTHFRP42898 ETV4-203ENST00000538265 2147 ntTSL 2 BASIC14.04□□□□□ -0.16
MTHFRP42898 TSPAN9-IT1-201ENST00000539784 562 ntTSL 4 BASIC14.04□□□□□ -0.16
MTHFRP42898 ARPP19-206ENST00000564163 718 ntTSL 2 BASIC14.04□□□□□ -0.16
MTHFRP42898 AC006504.5-210ENST00000585827 539 ntTSL 4 BASIC14.04□□□□□ -0.16
MTHFRP42898 AC009041.1-202ENST00000599946 987 ntTSL 5 BASIC14.04□□□□□ -0.16
MTHFRP42898 ZNF677-210ENST00000601413 706 ntTSL 2 BASIC14.04□□□□□ -0.16
MTHFRP42898 AL356740.1-201ENST00000602192 1297 ntBASIC14.04□□□□□ -0.16
MTHFRP42898 AC112220.4-201ENST00000604982 1263 ntBASIC14.04□□□□□ -0.16
MTHFRP42898 AL109954.3-201ENST00000615088 558 ntBASIC14.04□□□□□ -0.16
MTHFRP42898 AL450487.2-201ENST00000615934 407 ntBASIC14.04□□□□□ -0.16
MTHFRP42898 NR1I2-206ENST00000638727 1194 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
MTHFRP42898 OXGR1-204ENST00000543457 1305 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
MTHFRP42898 PCMTD2-204ENST00000369758 3212 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
MTHFRP42898 C20orf203-202ENST00000608990 5076 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
MTHFRP42898 CLEC18B-204ENST00000617101 2321 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
MTHFRP42898 PTPN23-201ENST00000265562 5244 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
MTHFRP42898 PRDM16-206ENST00000511072 4282 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
MTHFRP42898 CYP2B6-202ENST00000593831 1426 ntTSL 2 BASIC14.04□□□□□ -0.16
MTHFRP42898 TGIF2-201ENST00000373872 3406 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
MTHFRP42898 AAR2-203ENST00000397286 1466 ntTSL 5 BASIC14.04□□□□□ -0.16
MTHFRP42898 CKMT2-203ENST00000437669 1479 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
MTHFRP42898 EHD4-201ENST00000220325 6416 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
MTHFRP42898 PRF1-202ENST00000441259 2533 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
MTHFRP42898 PINX1-201ENST00000314787 1545 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
MTHFRP42898 LAMB2-202ENST00000418109 5674 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
MTHFRP42898 CELF1-214ENST00000531165 3650 ntTSL 2 BASIC14.04□□□□□ -0.16
MTHFRP42898 COL4A3-202ENST00000396578 8097 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 113.1 ms