Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 AIF1L-205ENST00000372301 671 ntTSL 2 BASIC10.24□□□□□ -0.77
HLA-DRB4X5D2U9 RPS9-204ENST00000391753 709 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
HLA-DRB4X5D2U9 KRTAP2-2-201ENST00000398477 733 ntAPPRIS P2 BASIC10.24□□□□□ -0.77
HLA-DRB4X5D2U9 RANGRF-202ENST00000407006 1074 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
HLA-DRB4X5D2U9 SNHG17-201ENST00000413755 648 ntTSL 3 BASIC10.24□□□□□ -0.77
HLA-DRB4X5D2U9 AL137058.1-201ENST00000418237 673 ntTSL 5 BASIC10.24□□□□□ -0.77
HLA-DRB4X5D2U9 AL355803.1-201ENST00000455524 188 ntTSL 2 BASIC10.24□□□□□ -0.77
HLA-DRB4X5D2U9 RN7SL81P-201ENST00000493781 261 ntBASIC10.24□□□□□ -0.77
HLA-DRB4X5D2U9 AC093627.2-201ENST00000497017 568 ntTSL 4 BASIC10.24□□□□□ -0.77
HLA-DRB4X5D2U9 OR5BD1P-201ENST00000532527 817 ntBASIC10.24□□□□□ -0.77
HLA-DRB4X5D2U9 AC025154.2-201ENST00000550530 445 ntTSL 3 BASIC10.24□□□□□ -0.77
HLA-DRB4X5D2U9 AC025154.2-202ENST00000552379 592 ntTSL 3 BASIC10.24□□□□□ -0.77
HLA-DRB4X5D2U9 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC10.24□□□□□ -0.77
HLA-DRB4X5D2U9 ZSCAN32-210ENST00000573830 668 ntTSL 3 BASIC10.24□□□□□ -0.77
HLA-DRB4X5D2U9 ZNF286A-212ENST00000580259 527 ntTSL 4 BASIC10.24□□□□□ -0.77
HLA-DRB4X5D2U9 AC015917.2-201ENST00000580714 493 ntTSL 3 BASIC10.24□□□□□ -0.77
HLA-DRB4X5D2U9 IMPA2-207ENST00000588927 787 ntTSL 5 BASIC10.24□□□□□ -0.77
HLA-DRB4X5D2U9 AC008982.2-201ENST00000600473 493 ntTSL 5 BASIC10.24□□□□□ -0.77
HLA-DRB4X5D2U9 AC012073.1-201ENST00000606114 1108 ntBASIC10.24□□□□□ -0.77
HLA-DRB4X5D2U9 IKZF1-217ENST00000612658 962 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
HLA-DRB4X5D2U9 SMIM11B-202ENST00000619874 843 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
HLA-DRB4X5D2U9 AP001043.1-205ENST00000623098 1033 ntTSL 5 BASIC10.24□□□□□ -0.77
HLA-DRB4X5D2U9 ZNF799-202ENST00000430385 2583 ntAPPRIS P1 TSL 2 BASIC10.24□□□□□ -0.77
HLA-DRB4X5D2U9 AC036108.2-201ENST00000566974 2562 ntTSL 2 BASIC10.24□□□□□ -0.77
HLA-DRB4X5D2U9 PITX2-211ENST00000613094 3240 ntAPPRIS ALT1 TSL 5 BASIC10.24□□□□□ -0.77
HLA-DRB4X5D2U9 ITPRIP-201ENST00000278071 6807 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
HLA-DRB4X5D2U9 KCNJ14-202ENST00000391884 3990 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
HLA-DRB4X5D2U9 ZBTB44-202ENST00000397753 3951 ntAPPRIS ALT2 TSL 5 BASIC10.24□□□□□ -0.77
HLA-DRB4X5D2U9 BIN3-202ENST00000399977 1340 ntTSL 2 BASIC10.24□□□□□ -0.77
HLA-DRB4X5D2U9 RFX8-201ENST00000428343 1686 ntAPPRIS P1 TSL 2 BASIC10.24□□□□□ -0.77
HLA-DRB4X5D2U9 SLC39A6-204ENST00000590986 3003 ntAPPRIS P3 TSL 5 BASIC10.24□□□□□ -0.77
HLA-DRB4X5D2U9 C5AR2-201ENST00000595464 6746 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
HLA-DRB4X5D2U9 RAB15-201ENST00000267512 3391 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
HLA-DRB4X5D2U9 NTRK2-203ENST00000323115 3708 ntAPPRIS ALT1 TSL 1 (best) BASIC10.24□□□□□ -0.77
HLA-DRB4X5D2U9 VSTM2A-201ENST00000302287 3401 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
HLA-DRB4X5D2U9 MSH6-214ENST00000616033 3429 ntTSL 5 BASIC10.24□□□□□ -0.77
HLA-DRB4X5D2U9 FLT4-212ENST00000619105 3806 ntTSL 5 BASIC10.24□□□□□ -0.77
HLA-DRB4X5D2U9 FBLN2-207ENST00000492059 4193 ntAPPRIS P4 TSL 2 BASIC10.24□□□□□ -0.77
HLA-DRB4X5D2U9 CACNA1G-218ENST00000507510 7014 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
HLA-DRB4X5D2U9 ZNF689-201ENST00000287461 3547 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
HLA-DRB4X5D2U9 AC008040.5-201ENST00000599781 1781 ntBASIC10.24□□□□□ -0.77
HLA-DRB4X5D2U9 PARD6B-201ENST00000371610 4615 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
HLA-DRB4X5D2U9 PHKG1-201ENST00000297373 1431 ntAPPRIS P2 TSL 1 (best) BASIC10.24□□□□□ -0.77
HLA-DRB4X5D2U9 PIGC-201ENST00000344529 1447 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
HLA-DRB4X5D2U9 AGAP2-203ENST00000547588 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
HLA-DRB4X5D2U9 CTNNB1-202ENST00000396183 3268 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
HLA-DRB4X5D2U9 RIN2-202ENST00000440354 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
HLA-DRB4X5D2U9 MYO9A-202ENST00000424560 4008 ntTSL 5 BASIC10.23□□□□□ -0.77
HLA-DRB4X5D2U9 CELF4-217ENST00000591282 1461 ntAPPRIS P3 TSL 1 (best) BASIC10.23□□□□□ -0.77
HLA-DRB4X5D2U9 HINT3-201ENST00000229633 3314 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
HLA-DRB4X5D2U9 AEBP1-201ENST00000223357 4081 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
HLA-DRB4X5D2U9 ST8SIA1-203ENST00000396037 9714 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
HLA-DRB4X5D2U9 VAMP7-202ENST00000286448 2646 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
HLA-DRB4X5D2U9 RBM15-203ENST00000602849 3368 ntAPPRIS P1 BASIC10.23□□□□□ -0.77
HLA-DRB4X5D2U9 MAGI1-217ENST00000611645 6398 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
HLA-DRB4X5D2U9 GATC-203ENST00000551765 4244 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
HLA-DRB4X5D2U9 RRAGA-201ENST00000380527 1589 ntAPPRIS P1 BASIC10.23□□□□□ -0.77
HLA-DRB4X5D2U9 NME7-203ENST00000472647 1590 ntAPPRIS ALT2 TSL 2 BASIC10.23□□□□□ -0.77
HLA-DRB4X5D2U9 MAN2C1-242ENST00000569482 3177 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
HLA-DRB4X5D2U9 MIER1-202ENST00000355977 3595 ntTSL 5 BASIC10.23□□□□□ -0.77
HLA-DRB4X5D2U9 ETNPPL-202ENST00000411864 2028 ntAPPRIS ALT1 TSL 1 (best) BASIC10.23□□□□□ -0.77
HLA-DRB4X5D2U9 FMR1-215ENST00000616382 1648 ntTSL 5 BASIC10.23□□□□□ -0.77
HLA-DRB4X5D2U9 PHF13-201ENST00000377648 3681 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
HLA-DRB4X5D2U9 SLC38A7-215ENST00000570101 4549 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
HLA-DRB4X5D2U9 AL645937.6-201ENST00000641122 3727 ntBASIC10.23□□□□□ -0.77
HLA-DRB4X5D2U9 AC009501.1-201ENST00000429952 2069 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
HLA-DRB4X5D2U9 INPP5J-201ENST00000331075 3347 ntAPPRIS ALT2 TSL 2 BASIC10.23□□□□□ -0.77
HLA-DRB4X5D2U9 PRPF40B-209ENST00000548825 3307 ntAPPRIS P2 TSL 5 BASIC10.23□□□□□ -0.77
HLA-DRB4X5D2U9 ZNF197-204ENST00000383745 2935 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
HLA-DRB4X5D2U9 ASB15-207ENST00000540573 1651 ntTSL 2 BASIC10.23□□□□□ -0.77
HLA-DRB4X5D2U9 CANX-202ENST00000452673 4207 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
HLA-DRB4X5D2U9 SEMA6D-202ENST00000354744 5931 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
HLA-DRB4X5D2U9 CLPX-201ENST00000300107 4695 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
HLA-DRB4X5D2U9 OR9I1-201ENST00000302610 945 ntAPPRIS P1 BASIC10.23□□□□□ -0.77
HLA-DRB4X5D2U9 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
HLA-DRB4X5D2U9 TPM3-211ENST00000368531 1115 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
HLA-DRB4X5D2U9 DPCD-202ENST00000370151 858 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
HLA-DRB4X5D2U9 C6orf136-202ENST00000376471 614 ntTSL 3 BASIC10.23□□□□□ -0.77
HLA-DRB4X5D2U9 TMSB4X-202ENST00000380635 767 ntAPPRIS P1 TSL 2 BASIC10.23□□□□□ -0.77
HLA-DRB4X5D2U9 CAMKK2-204ENST00000392473 2967 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
HLA-DRB4X5D2U9 AC073316.1-202ENST00000402115 988 ntTSL 5 BASIC10.23□□□□□ -0.77
HLA-DRB4X5D2U9 PSMA1-202ENST00000418988 1266 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
HLA-DRB4X5D2U9 AP001596.1-201ENST00000429340 781 ntTSL 5 BASIC10.23□□□□□ -0.77
HLA-DRB4X5D2U9 AL590617.2-201ENST00000432673 917 ntTSL 3 BASIC10.23□□□□□ -0.77
HLA-DRB4X5D2U9 DCST1-AS1-201ENST00000452962 822 ntTSL 2 BASIC10.23□□□□□ -0.77
HLA-DRB4X5D2U9 AC084030.1-201ENST00000455068 561 ntTSL 4 BASIC10.23□□□□□ -0.77
HLA-DRB4X5D2U9 CHCHD2P9-201ENST00000461726 456 ntBASIC10.23□□□□□ -0.77
HLA-DRB4X5D2U9 SIRT3-210ENST00000529382 1225 ntTSL 2 BASIC10.23□□□□□ -0.77
HLA-DRB4X5D2U9 AC129102.1-201ENST00000535755 525 ntTSL 4 BASIC10.23□□□□□ -0.77
HLA-DRB4X5D2U9 AP001160.1-201ENST00000535817 565 ntTSL 3 BASIC10.23□□□□□ -0.77
HLA-DRB4X5D2U9 ADSSL1-208ENST00000555674 520 ntTSL 3 BASIC10.23□□□□□ -0.77
HLA-DRB4X5D2U9 CHMP4BP1-201ENST00000556017 588 ntBASIC10.23□□□□□ -0.77
HLA-DRB4X5D2U9 AC104758.2-201ENST00000562716 483 ntTSL 3 BASIC10.23□□□□□ -0.77
HLA-DRB4X5D2U9 HS3ST3A1-202ENST00000578576 750 ntTSL 3 BASIC10.23□□□□□ -0.77
HLA-DRB4X5D2U9 FAM104A-206ENST00000583024 417 ntTSL 3 BASIC10.23□□□□□ -0.77
HLA-DRB4X5D2U9 MIR2392-201ENST00000584881 84 ntBASIC10.23□□□□□ -0.77
HLA-DRB4X5D2U9 AC010422.5-201ENST00000597961 585 ntAPPRIS P1 TSL 4 BASIC10.23□□□□□ -0.77
HLA-DRB4X5D2U9 AL359091.4-201ENST00000610052 409 ntBASIC10.23□□□□□ -0.77
HLA-DRB4X5D2U9 ZNFX1-AS1_1.1-201ENST00000615787 198 ntBASIC10.23□□□□□ -0.77
HLA-DRB4X5D2U9 GLIDR-205ENST00000640674 884 ntTSL 5 BASIC10.23□□□□□ -0.77
Retrieved 100 of 98,524 protein–RNA pairs in 92.2 ms