Protein–RNA interactions for Protein: Q92902

HPS1, Hermansky-Pudlak syndrome 1 protein, humanhuman

Predictions only

Length 700 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1Q92902 PAM-204ENST00000348126 3622 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
HPS1Q92902 ESPNL-203ENST00000409506 3610 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
HPS1Q92902 MCHR2-202ENST00000369212 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
HPS1Q92902 EGLN3-205ENST00000547327 2849 ntBASIC12.61□□□□□ -0.39
HPS1Q92902 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
HPS1Q92902 SPICE1-201ENST00000295872 5417 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
HPS1Q92902 ERVK13-1-205ENST00000568395 5578 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
HPS1Q92902 NUP133-201ENST00000261396 5207 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
HPS1Q92902 TNFSF13-203ENST00000380535 2195 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
HPS1Q92902 RTN3-210ENST00000540798 3124 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
HPS1Q92902 AC003102.2-201ENST00000589195 1469 ntBASIC12.6□□□□□ -0.39
HPS1Q92902 HYLS1-202ENST00000425380 2061 ntAPPRIS P1 TSL 3 BASIC12.6□□□□□ -0.39
HPS1Q92902 BSDC1-201ENST00000341071 4599 ntTSL 2 BASIC12.6□□□□□ -0.39
HPS1Q92902 PPP1R11-205ENST00000376772 1731 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
HPS1Q92902 ANTXR2-203ENST00000403729 8273 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
HPS1Q92902 PNPLA7-202ENST00000406427 4806 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
HPS1Q92902 KC6-207ENST00000600644 2311 ntTSL 3 BASIC12.6□□□□□ -0.39
HPS1Q92902 AL445523.1-201ENST00000451184 1362 ntBASIC12.6□□□□□ -0.39
HPS1Q92902 PPT1-205ENST00000449045 1957 ntTSL 2 BASIC12.6□□□□□ -0.39
HPS1Q92902 IGHG2-202ENST00000641095 2594 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
HPS1Q92902 LDLRAD4-201ENST00000359446 8486 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
HPS1Q92902 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
HPS1Q92902 BCL2L11-217ENST00000610735 5120 ntTSL 5 BASIC12.6□□□□□ -0.39
HPS1Q92902 FANCC-202ENST00000375305 4504 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
HPS1Q92902 HNF1A-208ENST00000541395 3332 ntTSL 2 BASIC12.6□□□□□ -0.39
HPS1Q92902 LRRC15-201ENST00000347624 5883 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
HPS1Q92902 IL4-201ENST00000231449 616 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
HPS1Q92902 OR5B12-201ENST00000302572 1054 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
HPS1Q92902 A1CF-204ENST00000373997 2116 ntAPPRIS ALT1 TSL 1 (best) BASIC12.6□□□□□ -0.39
HPS1Q92902 GCNT6-201ENST00000379591 934 ntBASIC12.6□□□□□ -0.39
HPS1Q92902 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
HPS1Q92902 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
HPS1Q92902 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
HPS1Q92902 AL136309.1-201ENST00000403917 691 ntBASIC12.6□□□□□ -0.39
HPS1Q92902 PSG5-207ENST00000407568 1064 ntTSL 2 BASIC12.6□□□□□ -0.39
HPS1Q92902 AL008707.1-201ENST00000422498 534 ntBASIC12.6□□□□□ -0.39
HPS1Q92902 SEPT14P1-201ENST00000458703 648 ntBASIC12.6□□□□□ -0.39
HPS1Q92902 RNU6-775P-201ENST00000459318 96 ntBASIC12.6□□□□□ -0.39
HPS1Q92902 CFHR2-203ENST00000476712 1020 ntAPPRIS ALT2 TSL 3 BASIC12.6□□□□□ -0.39
HPS1Q92902 PRDM2-213ENST00000503842 705 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
HPS1Q92902 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC12.6□□□□□ -0.39
HPS1Q92902 PPY2P-201ENST00000582808 702 ntBASIC12.6□□□□□ -0.39
HPS1Q92902 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
HPS1Q92902 KLK11-210ENST00000600362 759 ntTSL 3 BASIC12.6□□□□□ -0.39
HPS1Q92902 AC106872.11-201ENST00000605838 421 ntBASIC12.6□□□□□ -0.39
HPS1Q92902 STATH-208ENST00000615994 598 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
HPS1Q92902 IL4-204ENST00000622422 717 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
HPS1Q92902 IGSF11-202ENST00000393775 3495 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
HPS1Q92902 USP30-201ENST00000257548 3742 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
HPS1Q92902 SPACA6P-AS-201ENST00000602324 3962 ntTSL 2 BASIC12.6□□□□□ -0.39
HPS1Q92902 CDCA3-202ENST00000422785 2760 ntTSL 2 BASIC12.6□□□□□ -0.39
HPS1Q92902 AC008033.3-201ENST00000612531 1407 ntBASIC12.6□□□□□ -0.39
HPS1Q92902 LYRM9-202ENST00000379103 1685 ntAPPRIS P1 TSL 3 BASIC12.6□□□□□ -0.39
HPS1Q92902 CAST-223ENST00000508608 2425 ntAPPRIS ALT2 TSL 2 BASIC12.6□□□□□ -0.39
HPS1Q92902 ABI1-212ENST00000490841 3188 ntTSL 2 BASIC12.6□□□□□ -0.39
HPS1Q92902 WIPF3-201ENST00000242140 4184 ntAPPRIS P2 TSL 5 BASIC12.6□□□□□ -0.39
HPS1Q92902 PSAP-201ENST00000394934 2830 ntAPPRIS ALT1 TSL 5 BASIC12.6□□□□□ -0.39
HPS1Q92902 HILPDA-201ENST00000257696 1349 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
HPS1Q92902 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
HPS1Q92902 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC12.6□□□□□ -0.39
HPS1Q92902 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
HPS1Q92902 VAV1-207ENST00000599806 2717 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
HPS1Q92902 ZIK1-202ENST00000536878 4144 ntAPPRIS ALT2 TSL 2 BASIC12.6□□□□□ -0.39
HPS1Q92902 MYO7A-205ENST00000458637 7336 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
HPS1Q92902 ANXA8-205ENST00000585281 1960 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
HPS1Q92902 SHC1P1-201ENST00000425230 1745 ntBASIC12.59□□□□□ -0.39
HPS1Q92902 DNM3-202ENST00000367731 7613 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
HPS1Q92902 RERG-204ENST00000536465 2134 ntAPPRIS P1 TSL 3 BASIC12.59□□□□□ -0.39
HPS1Q92902 SLC25A25-205ENST00000432073 3678 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
HPS1Q92902 AP3M2-207ENST00000518421 3669 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
HPS1Q92902 BHMT-201ENST00000274353 2502 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
HPS1Q92902 CXCL5-201ENST00000296027 2538 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
HPS1Q92902 PPT1-203ENST00000433473 2267 ntAPPRIS ALT1 TSL 1 (best) BASIC12.59□□□□□ -0.39
HPS1Q92902 MME-204ENST00000462745 3590 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
HPS1Q92902 FERMT2-201ENST00000341590 3338 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
HPS1Q92902 OSBP2-203ENST00000403222 3728 ntTSL 5 BASIC12.59□□□□□ -0.39
HPS1Q92902 LGALS3BP-201ENST00000262776 2405 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
HPS1Q92902 TUT1-202ENST00000308436 2826 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
HPS1Q92902 MAGI1-217ENST00000611645 6398 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
HPS1Q92902 KCNA1-201ENST00000382545 7997 ntAPPRIS P1 TSL 4 BASIC12.59□□□□□ -0.39
HPS1Q92902 PPT1-204ENST00000439754 2195 ntTSL 3 BASIC12.59□□□□□ -0.39
HPS1Q92902 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
HPS1Q92902 GUCY2EP-203ENST00000531117 1918 ntBASIC12.59□□□□□ -0.39
HPS1Q92902 SRP72-205ENST00000510663 2473 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
HPS1Q92902 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
HPS1Q92902 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC12.59□□□□□ -0.39
HPS1Q92902 CLIC1-206ENST00000375779 1127 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
HPS1Q92902 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC12.59□□□□□ -0.39
HPS1Q92902 TMEM52-203ENST00000378602 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
HPS1Q92902 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
HPS1Q92902 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC12.59□□□□□ -0.39
HPS1Q92902 RN7SKP175-201ENST00000408472 289 ntBASIC12.59□□□□□ -0.39
HPS1Q92902 AC003075.1-208ENST00000415246 596 ntTSL 3 BASIC12.59□□□□□ -0.39
HPS1Q92902 AC007731.4-201ENST00000420225 652 ntTSL 2 BASIC12.59□□□□□ -0.39
HPS1Q92902 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC12.59□□□□□ -0.39
HPS1Q92902 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC12.59□□□□□ -0.39
HPS1Q92902 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC12.59□□□□□ -0.39
HPS1Q92902 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
HPS1Q92902 AC006003.1-201ENST00000448541 613 ntTSL 4 BASIC12.59□□□□□ -0.39
HPS1Q92902 AL391280.1-201ENST00000506969 1062 ntBASIC12.59□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 171.9 ms