Protein–RNA interactions for Protein: Q8TC41

RNF217, Probable E3 ubiquitin-protein ligase RNF217, humanhuman

Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF217Q8TC41 AC100827.2-201ENST00000563214 1194 ntBASIC13.21□□□□□ -0.29
RNF217Q8TC41 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC13.21□□□□□ -0.29
RNF217Q8TC41 DUX4L46-201ENST00000566845 751 ntBASIC13.21□□□□□ -0.29
RNF217Q8TC41 AC005828.3-201ENST00000583552 591 ntTSL 5 BASIC13.21□□□□□ -0.29
RNF217Q8TC41 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
RNF217Q8TC41 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC13.21□□□□□ -0.29
RNF217Q8TC41 AL008721.1-201ENST00000609964 604 ntBASIC13.21□□□□□ -0.29
RNF217Q8TC41 AC022960.2-201ENST00000616300 666 ntBASIC13.21□□□□□ -0.29
RNF217Q8TC41 AC027348.2-201ENST00000624375 642 ntBASIC13.21□□□□□ -0.29
RNF217Q8TC41 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC13.21□□□□□ -0.29
RNF217Q8TC41 TMBIM7P-202ENST00000641474 1516 ntBASIC13.21□□□□□ -0.29
RNF217Q8TC41 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC13.21□□□□□ -0.29
RNF217Q8TC41 STRC-213ENST00000541030 5305 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
RNF217Q8TC41 DPYSL5-201ENST00000288699 5209 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
RNF217Q8TC41 POLA2-201ENST00000265465 3744 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
RNF217Q8TC41 SLC45A4-202ENST00000517878 3470 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
RNF217Q8TC41 FAM214B-205ENST00000488109 2999 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
RNF217Q8TC41 C1QTNF3-201ENST00000231338 1959 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
RNF217Q8TC41 LOXHD1-203ENST00000398686 1958 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
RNF217Q8TC41 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
RNF217Q8TC41 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
RNF217Q8TC41 NLRC3-201ENST00000324659 3414 ntTSL 5 BASIC13.21□□□□□ -0.3
RNF217Q8TC41 NIPAL3-202ENST00000339255 1676 ntTSL 5 BASIC13.21□□□□□ -0.3
RNF217Q8TC41 KCNMA1-208ENST00000372440 3849 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.3
RNF217Q8TC41 KCNMA1-227ENST00000638203 3840 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.3
RNF217Q8TC41 KCNMA1-233ENST00000638351 3849 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.3
RNF217Q8TC41 CARS-214ENST00000529772 2637 ntTSL 2 BASIC13.21□□□□□ -0.3
RNF217Q8TC41 ARHGAP20-202ENST00000524756 6180 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
RNF217Q8TC41 SMAGP-203ENST00000603798 2350 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
RNF217Q8TC41 EPHB6-211ENST00000619012 4011 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
RNF217Q8TC41 UNC93A-201ENST00000230256 2116 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
RNF217Q8TC41 NR4A3-203ENST00000395097 3794 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
RNF217Q8TC41 MROH7-TTC4-201ENST00000414150 5867 ntAPPRIS P5 TSL 2 BASIC13.21□□□□□ -0.3
RNF217Q8TC41 UBE2A-202ENST00000371558 1874 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.3
RNF217Q8TC41 SDCCAG8-201ENST00000366541 2567 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
RNF217Q8TC41 DNAJC9-201ENST00000372950 3032 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
RNF217Q8TC41 ELP4-222ENST00000640231 2062 ntTSL 5 BASIC13.2□□□□□ -0.3
RNF217Q8TC41 MED29-201ENST00000315588 3653 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
RNF217Q8TC41 TAF12-201ENST00000263974 1359 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
RNF217Q8TC41 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC13.2□□□□□ -0.3
RNF217Q8TC41 C16orf82-201ENST00000418886 2268 ntAPPRIS ALT2 BASIC13.2□□□□□ -0.3
RNF217Q8TC41 OTOF-203ENST00000339598 4756 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
RNF217Q8TC41 DDX39B-214ENST00000458640 2003 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
RNF217Q8TC41 ZNF460-202ENST00000537645 2037 ntTSL 2 BASIC13.2□□□□□ -0.3
RNF217Q8TC41 BCL6-211ENST00000621333 3399 ntTSL 5 BASIC13.2□□□□□ -0.3
RNF217Q8TC41 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC13.2□□□□□ -0.3
RNF217Q8TC41 AL008718.2-201ENST00000609206 1313 ntBASIC13.2□□□□□ -0.3
RNF217Q8TC41 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
RNF217Q8TC41 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
RNF217Q8TC41 BHLHE40-AS1-204ENST00000620618 2355 ntTSL 2 BASIC13.2□□□□□ -0.3
RNF217Q8TC41 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
RNF217Q8TC41 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
RNF217Q8TC41 ATXN3-201ENST00000340660 1205 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
RNF217Q8TC41 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC13.2□□□□□ -0.3
RNF217Q8TC41 BOLA2P3-201ENST00000404566 256 ntBASIC13.2□□□□□ -0.3
RNF217Q8TC41 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC13.2□□□□□ -0.3
RNF217Q8TC41 AC010141.1-201ENST00000411585 623 ntBASIC13.2□□□□□ -0.3
RNF217Q8TC41 HSFY1P1-201ENST00000423928 1178 ntBASIC13.2□□□□□ -0.3
RNF217Q8TC41 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC13.2□□□□□ -0.3
RNF217Q8TC41 KRT17P8-201ENST00000540749 863 ntBASIC13.2□□□□□ -0.3
RNF217Q8TC41 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC13.2□□□□□ -0.3
RNF217Q8TC41 ETFRF1-207ENST00000556351 838 ntAPPRIS ALT1 TSL 2 BASIC13.2□□□□□ -0.3
RNF217Q8TC41 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC13.2□□□□□ -0.3
RNF217Q8TC41 DRG2-220ENST00000583355 891 ntTSL 3 BASIC13.2□□□□□ -0.3
RNF217Q8TC41 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC13.2□□□□□ -0.3
RNF217Q8TC41 AC105148.1-201ENST00000604961 409 ntBASIC13.2□□□□□ -0.3
RNF217Q8TC41 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
RNF217Q8TC41 UEVLD-213ENST00000543987 2503 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
RNF217Q8TC41 SPIN3-201ENST00000374919 4642 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
RNF217Q8TC41 FAM225B-201ENST00000423546 5629 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
RNF217Q8TC41 GIT2-201ENST00000320063 2094 ntTSL 5 BASIC13.2□□□□□ -0.3
RNF217Q8TC41 ENSA-208ENST00000369014 2085 ntAPPRIS P4 TSL 1 (best) BASIC13.2□□□□□ -0.3
RNF217Q8TC41 LINC02135-201ENST00000599486 2065 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
RNF217Q8TC41 CNTNAP2-225ENST00000639247 2064 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
RNF217Q8TC41 CACNB1-212ENST00000622445 3722 ntTSL 5 BASIC13.2□□□□□ -0.3
RNF217Q8TC41 TTC39B-201ENST00000297615 3053 ntAPPRIS ALT2 TSL 2 BASIC13.2□□□□□ -0.3
RNF217Q8TC41 ADGRE5-202ENST00000357355 3054 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
RNF217Q8TC41 COX7A2L-202ENST00000378669 3056 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
RNF217Q8TC41 PLEKHG5-208ENST00000400915 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
RNF217Q8TC41 CLK3-201ENST00000345005 1846 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
RNF217Q8TC41 RGS16-201ENST00000367558 2427 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
RNF217Q8TC41 CLPB-201ENST00000294053 3240 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
RNF217Q8TC41 CHST15-201ENST00000346248 4810 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
RNF217Q8TC41 LRPPRC-201ENST00000260665 6335 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
RNF217Q8TC41 CEACAM20-201ENST00000611497 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
RNF217Q8TC41 LRRIQ3-203ENST00000370911 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
RNF217Q8TC41 RTFDC1-203ENST00000395881 1572 ntTSL 2 BASIC13.2□□□□□ -0.3
RNF217Q8TC41 SATB2-AS1-205ENST00000450728 3314 ntTSL 2 BASIC13.19□□□□□ -0.3
RNF217Q8TC41 TBL1X-202ENST00000380961 4674 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
RNF217Q8TC41 SLC25A24-203ENST00000565488 4271 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
RNF217Q8TC41 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
RNF217Q8TC41 AR-208ENST00000612452 10676 ntTSL 5 BASIC13.19□□□□□ -0.3
RNF217Q8TC41 TM9SF2-201ENST00000376387 3430 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
RNF217Q8TC41 HDAC7-230ENST00000552960 3216 ntAPPRIS ALT2 TSL 2 BASIC13.19□□□□□ -0.3
RNF217Q8TC41 ADAM28-202ENST00000437154 2085 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
RNF217Q8TC41 EPB42-203ENST00000540029 2098 ntTSL 2 BASIC13.19□□□□□ -0.3
RNF217Q8TC41 ERBB2-201ENST00000269571 4545 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
RNF217Q8TC41 CEP63-215ENST00000606977 2800 ntAPPRIS P3 TSL 5 BASIC13.19□□□□□ -0.3
RNF217Q8TC41 KIF17-202ENST00000375044 3572 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
RNF217Q8TC41 KCNH7-201ENST00000328032 2434 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms