Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 PLIN3-201ENST00000221957 2333 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
LMO3Q8TAP4 ARHGAP25-201ENST00000409030 2936 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
LMO3Q8TAP4 LRCH3-203ENST00000425562 2970 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
LMO3Q8TAP4 GMCL1-201ENST00000282570 4191 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
LMO3Q8TAP4 TPO-202ENST00000345913 3145 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
LMO3Q8TAP4 CXCL5-201ENST00000296027 2538 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
LMO3Q8TAP4 C17orf53-203ENST00000585683 2529 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
LMO3Q8TAP4 CAPZB-201ENST00000264202 858 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
LMO3Q8TAP4 CST1-201ENST00000304749 760 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
LMO3Q8TAP4 MRPL55-207ENST00000366733 834 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
LMO3Q8TAP4 TMEM219-202ENST00000414689 1024 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
LMO3Q8TAP4 CD300LF-206ENST00000464910 996 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
LMO3Q8TAP4 SRP14-204ENST00000558720 780 ntTSL 2 BASIC14.3□□□□□ -0.12
LMO3Q8TAP4 TMEM219-204ENST00000566848 1292 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
LMO3Q8TAP4 AC003070.1-201ENST00000592389 457 ntTSL 2 BASIC14.3□□□□□ -0.12
LMO3Q8TAP4 AC008750.5-201ENST00000595500 473 ntTSL 2 BASIC14.3□□□□□ -0.12
LMO3Q8TAP4 Metazoa_SRP.83-201ENST00000611762 320 ntBASIC14.3□□□□□ -0.12
LMO3Q8TAP4 Metazoa_SRP.37-201ENST00000617743 320 ntBASIC14.3□□□□□ -0.12
LMO3Q8TAP4 AL139823.1-201ENST00000641871 1225 ntBASIC14.3□□□□□ -0.12
LMO3Q8TAP4 VRK3-205ENST00000593919 1979 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
LMO3Q8TAP4 ERVK13-1-207ENST00000569465 3321 ntTSL 2 BASIC14.3□□□□□ -0.12
LMO3Q8TAP4 TRPM4-202ENST00000427978 3444 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
LMO3Q8TAP4 MIR22HG-201ENST00000334146 1383 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
LMO3Q8TAP4 DDX11L2-201ENST00000437401 1398 ntBASIC14.3□□□□□ -0.12
LMO3Q8TAP4 NDRG1-222ENST00000522476 1385 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
LMO3Q8TAP4 CSNK1G1-205ENST00000607537 2083 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
LMO3Q8TAP4 GET4-202ENST00000407192 4356 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
LMO3Q8TAP4 MSRA-202ENST00000382490 1460 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
LMO3Q8TAP4 ZNF33A-205ENST00000469037 1530 ntTSL 5 BASIC14.3□□□□□ -0.12
LMO3Q8TAP4 ZNF215-207ENST00000610573 1503 ntTSL 5 BASIC14.3□□□□□ -0.12
LMO3Q8TAP4 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
LMO3Q8TAP4 FAM183BP-201ENST00000409072 1595 ntBASIC14.3□□□□□ -0.12
LMO3Q8TAP4 GOLGA2P5-201ENST00000266746 2395 ntBASIC14.3□□□□□ -0.12
LMO3Q8TAP4 PWWP2A-202ENST00000456329 3991 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
LMO3Q8TAP4 CARMIL2-202ENST00000545661 4119 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
LMO3Q8TAP4 LINGO1-AS1-201ENST00000558691 1720 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
LMO3Q8TAP4 CTRL-205ENST00000574481 1721 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
LMO3Q8TAP4 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
LMO3Q8TAP4 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
LMO3Q8TAP4 TTC26-207ENST00000478836 1794 ntTSL 2 BASIC14.29□□□□□ -0.12
LMO3Q8TAP4 NOX5-202ENST00000388866 2804 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
LMO3Q8TAP4 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
LMO3Q8TAP4 ADGRA1-201ENST00000392606 3438 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
LMO3Q8TAP4 KCNH4-202ENST00000607371 3723 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
LMO3Q8TAP4 LCE3B-201ENST00000335633 288 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
LMO3Q8TAP4 OLFML2B-202ENST00000367938 1153 ntTSL 2 BASIC14.29□□□□□ -0.12
LMO3Q8TAP4 CXCL12-202ENST00000374426 470 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
LMO3Q8TAP4 OR2T32P-201ENST00000403423 963 ntBASIC14.29□□□□□ -0.12
LMO3Q8TAP4 IGKV1D-43-201ENST00000468879 532 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
LMO3Q8TAP4 PGAP2-224ENST00000490830 810 ntTSL 3 BASIC14.29□□□□□ -0.12
LMO3Q8TAP4 RORA-AS1-201ENST00000501579 761 ntTSL 5 BASIC14.29□□□□□ -0.12
LMO3Q8TAP4 NDUFB2P1-201ENST00000506966 295 ntBASIC14.29□□□□□ -0.12
LMO3Q8TAP4 AC018845.3-201ENST00000562536 516 ntTSL 3 BASIC14.29□□□□□ -0.12
LMO3Q8TAP4 AC026470.4-201ENST00000565812 308 ntTSL 3 BASIC14.29□□□□□ -0.12
LMO3Q8TAP4 SCAMP5-216ENST00000568081 710 ntTSL 2 BASIC14.29□□□□□ -0.12
LMO3Q8TAP4 AC136624.2-201ENST00000574883 542 ntTSL 3 BASIC14.29□□□□□ -0.12
LMO3Q8TAP4 Metazoa_SRP.153-201ENST00000620153 341 ntBASIC14.29□□□□□ -0.12
LMO3Q8TAP4 PSMA6-215ENST00000622405 978 ntTSL 2 BASIC14.29□□□□□ -0.12
LMO3Q8TAP4 PSMA6-217ENST00000628955 364 ntTSL 5 BASIC14.29□□□□□ -0.12
LMO3Q8TAP4 AC114296.1-204ENST00000637197 1173 ntAPPRIS P5 TSL 5 BASIC14.29□□□□□ -0.12
LMO3Q8TAP4 MIR22HG-208ENST00000574306 2626 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
LMO3Q8TAP4 GUCY1A3-205ENST00000506455 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
LMO3Q8TAP4 AC118758.2-201ENST00000614242 2813 ntBASIC14.29□□□□□ -0.12
LMO3Q8TAP4 SELENON-202ENST00000361547 4334 ntAPPRIS P4 TSL 1 (best) BASIC14.29□□□□□ -0.12
LMO3Q8TAP4 KRT8P5-201ENST00000592443 1458 ntBASIC14.29□□□□□ -0.12
LMO3Q8TAP4 COQ4-201ENST00000300452 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
LMO3Q8TAP4 GNG4-201ENST00000366597 1595 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
LMO3Q8TAP4 ZNF200-205ENST00000431561 3348 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
LMO3Q8TAP4 PLD5-204ENST00000442594 3305 ntAPPRIS P3 TSL 5 BASIC14.29□□□□□ -0.12
LMO3Q8TAP4 ARF4-201ENST00000303436 1660 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
LMO3Q8TAP4 CD276-202ENST00000318443 3469 ntAPPRIS P2 TSL 2 BASIC14.29□□□□□ -0.12
LMO3Q8TAP4 DHX30-215ENST00000619982 3574 ntAPPRIS ALT1 TSL 5 BASIC14.29□□□□□ -0.12
LMO3Q8TAP4 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC14.29□□□□□ -0.12
LMO3Q8TAP4 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
LMO3Q8TAP4 GLO1-201ENST00000373365 2012 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
LMO3Q8TAP4 BTNL8-202ENST00000340184 2071 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
LMO3Q8TAP4 SLC16A2-201ENST00000587091 4161 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
LMO3Q8TAP4 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
LMO3Q8TAP4 PCDHGA11-201ENST00000398587 4647 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
LMO3Q8TAP4 CABP4-201ENST00000325656 2559 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
LMO3Q8TAP4 SLC28A1-201ENST00000286749 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
LMO3Q8TAP4 RBM10-202ENST00000345781 3108 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
LMO3Q8TAP4 TMOD1-201ENST00000259365 3343 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
LMO3Q8TAP4 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
LMO3Q8TAP4 NDUFB8-201ENST00000299166 671 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
LMO3Q8TAP4 MT1F-201ENST00000334350 690 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
LMO3Q8TAP4 CHCHD7-202ENST00000355315 1535 ntTSL 2 BASIC14.28□□□□□ -0.12
LMO3Q8TAP4 HIST1H2BK-201ENST00000356950 381 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
LMO3Q8TAP4 MYT1-202ENST00000360149 2061 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
LMO3Q8TAP4 CES1-201ENST00000360526 2006 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
LMO3Q8TAP4 ECM1-202ENST00000369047 2070 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
LMO3Q8TAP4 ZNF485-202ENST00000374435 2052 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
LMO3Q8TAP4 ALPL-203ENST00000374832 2193 ntAPPRIS P3 TSL 2 BASIC14.28□□□□□ -0.12
LMO3Q8TAP4 PSMG4-203ENST00000380306 726 ntTSL 3 BASIC14.28□□□□□ -0.12
LMO3Q8TAP4 ASMT-203ENST00000381241 1388 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
LMO3Q8TAP4 IL1R2-202ENST00000393414 1405 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
LMO3Q8TAP4 SP140L-203ENST00000415673 2665 ntAPPRIS P3 TSL 5 BASIC14.28□□□□□ -0.12
LMO3Q8TAP4 CTBP2P8-201ENST00000422584 1330 ntBASIC14.28□□□□□ -0.12
LMO3Q8TAP4 BUD23-204ENST00000423497 1219 ntTSL 5 BASIC14.28□□□□□ -0.12
LMO3Q8TAP4 SENP3-202ENST00000429205 2222 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 156.1 ms