Protein–RNA interactions for Protein: P35125

USP6, Ubiquitin carboxyl-terminal hydrolase 6, humanhuman

Predictions only

Length 1,406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP6P35125 HIST1H2BN-201ENST00000396980 432 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
USP6P35125 TGFA-207ENST00000450929 950 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
USP6P35125 HAX1-204ENST00000457918 914 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
USP6P35125 AC105424.1-201ENST00000514583 209 ntBASIC17.66■□□□□ 0.42
USP6P35125 FAM231B-201ENST00000600179 510 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
USP6P35125 AL139260.3-204ENST00000621281 609 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
USP6P35125 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC17.66■□□□□ 0.42
USP6P35125 PTPRH-202ENST00000376350 3877 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
USP6P35125 PGLYRP2-201ENST00000292609 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
USP6P35125 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
USP6P35125 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
USP6P35125 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
USP6P35125 WHRN-201ENST00000265134 2847 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
USP6P35125 AC106785.2-201ENST00000564385 1319 ntBASIC17.66■□□□□ 0.42
USP6P35125 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
USP6P35125 RDX-218ENST00000544551 4117 ntTSL 2 BASIC17.66■□□□□ 0.42
USP6P35125 SLC8A2-203ENST00000542837 3603 ntTSL 2 BASIC17.66■□□□□ 0.42
USP6P35125 MRPL17-201ENST00000288937 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
USP6P35125 NTN4-203ENST00000538383 1971 ntTSL 2 BASIC17.66■□□□□ 0.42
USP6P35125 CPT1A-202ENST00000376618 2635 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
USP6P35125 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC17.66■□□□□ 0.42
USP6P35125 SLC37A3-203ENST00000447932 3254 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
USP6P35125 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
USP6P35125 RORC-201ENST00000318247 2180 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
USP6P35125 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
USP6P35125 LY6G6F-201ENST00000375832 920 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
USP6P35125 TOMM5-202ENST00000377773 808 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
USP6P35125 CD33-202ENST00000391796 1089 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
USP6P35125 PHBP3-201ENST00000412562 819 ntBASIC17.65■□□□□ 0.42
USP6P35125 YIPF7-202ENST00000415895 1196 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
USP6P35125 AC004910.1-201ENST00000433493 787 ntBASIC17.65■□□□□ 0.42
USP6P35125 HNRNPA1P73-201ENST00000446472 928 ntBASIC17.65■□□□□ 0.42
USP6P35125 HNRNPA1P9-201ENST00000450624 950 ntBASIC17.65■□□□□ 0.42
USP6P35125 AC008750.2-201ENST00000526996 627 ntTSL 3 BASIC17.65■□□□□ 0.42
USP6P35125 SELENOK-205ENST00000541726 814 ntAPPRIS ALT1 TSL 5 BASIC17.65■□□□□ 0.42
USP6P35125 CIRBP-AS1-201ENST00000585832 994 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
USP6P35125 AC104423.1-201ENST00000591742 728 ntTSL 3 BASIC17.65■□□□□ 0.42
USP6P35125 KCNQ1OT1_1.1-201ENST00000622358 464 ntBASIC17.65■□□□□ 0.42
USP6P35125 TP73-207ENST00000378290 1831 ntTSL 2 BASIC17.65■□□□□ 0.42
USP6P35125 CYP20A1-210ENST00000613925 1986 ntTSL 2 BASIC17.65■□□□□ 0.42
USP6P35125 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
USP6P35125 RETREG3-203ENST00000585894 1733 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
USP6P35125 GAPDHS-201ENST00000222286 1489 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
USP6P35125 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
USP6P35125 ZDHHC4-202ENST00000396706 1942 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
USP6P35125 OVCH1-AS1-204ENST00000641955 5529 ntBASIC17.65■□□□□ 0.42
USP6P35125 CARS-AS1-201ENST00000499962 2664 ntTSL 2 BASIC17.65■□□□□ 0.42
USP6P35125 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
USP6P35125 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC17.65■□□□□ 0.42
USP6P35125 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
USP6P35125 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC17.65■□□□□ 0.42
USP6P35125 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
USP6P35125 TRIM15-206ENST00000376688 426 ntTSL 5 BASIC17.64■□□□□ 0.42
USP6P35125 FTH1P19-201ENST00000402402 528 ntBASIC17.64■□□□□ 0.42
USP6P35125 AC140481.1-202ENST00000436488 525 ntTSL 2 BASIC17.64■□□□□ 0.42
USP6P35125 AL365194.1-201ENST00000440032 361 ntTSL 3 BASIC17.64■□□□□ 0.42
USP6P35125 SATB2-AS1-202ENST00000441234 468 ntTSL 3 BASIC17.64■□□□□ 0.42
USP6P35125 GOSR1-205ENST00000467337 1011 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
USP6P35125 ACAD11-204ENST00000481970 1891 ntTSL 5 BASIC17.64■□□□□ 0.42
USP6P35125 AC079340.2-201ENST00000504957 495 ntTSL 2 BASIC17.64■□□□□ 0.42
USP6P35125 TACC1-209ENST00000520611 1550 ntTSL 2 BASIC17.64■□□□□ 0.42
USP6P35125 AP001360.1-203ENST00000524708 464 ntTSL 3 BASIC17.64■□□□□ 0.42
USP6P35125 ZSCAN5C-202ENST00000534327 1892 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.42
USP6P35125 GCOM1-214ENST00000587652 2329 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.42
USP6P35125 RN7SL827P-201ENST00000607480 288 ntBASIC17.64■□□□□ 0.42
USP6P35125 LINC01398-202ENST00000634819 1292 ntTSL 5 BASIC17.64■□□□□ 0.42
USP6P35125 AC116631.1-201ENST00000640685 576 ntTSL 5 BASIC17.64■□□□□ 0.42
USP6P35125 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
USP6P35125 CLCN7-201ENST00000262318 3717 ntTSL 5 BASIC17.64■□□□□ 0.41
USP6P35125 PLA2G3-201ENST00000215885 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
USP6P35125 SAMD4B-201ENST00000314471 4519 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
USP6P35125 LINC00324-201ENST00000315707 2082 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
USP6P35125 AL138762.1-201ENST00000608554 1637 ntBASIC17.64■□□□□ 0.41
USP6P35125 AL137077.2-201ENST00000635124 1608 ntBASIC17.64■□□□□ 0.41
USP6P35125 DDX6P2-201ENST00000619520 1455 ntBASIC17.64■□□□□ 0.41
USP6P35125 SULT1A3-202ENST00000395138 1326 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
USP6P35125 EFHC1-221ENST00000636489 2421 ntTSL 5 BASIC17.64■□□□□ 0.41
USP6P35125 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
USP6P35125 PRKAG1-201ENST00000316299 1683 ntTSL 2 BASIC17.64■□□□□ 0.41
USP6P35125 LYRM1-202ENST00000396052 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
USP6P35125 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
USP6P35125 MDM1-204ENST00000411698 2472 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
USP6P35125 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
USP6P35125 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
USP6P35125 CPNE5-202ENST00000393189 2542 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
USP6P35125 SMPDL3B-202ENST00000373894 1878 ntAPPRIS P4 TSL 1 (best) BASIC17.64■□□□□ 0.41
USP6P35125 SERPING1-203ENST00000378323 1733 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
USP6P35125 GLB1L-201ENST00000295759 2745 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
USP6P35125 PPARA-202ENST00000402126 1558 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
USP6P35125 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
USP6P35125 AC010182.1-201ENST00000548943 2434 ntBASIC17.64■□□□□ 0.41
USP6P35125 RGS8-204ENST00000483095 1432 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
USP6P35125 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
USP6P35125 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC17.64■□□□□ 0.41
USP6P35125 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
USP6P35125 HLA-DRB6-202ENST00000437183 1090 ntBASIC17.64■□□□□ 0.41
USP6P35125 AC105446.1-201ENST00000441882 407 ntTSL 3 BASIC17.64■□□□□ 0.41
USP6P35125 AC106748.1-201ENST00000454801 384 ntBASIC17.64■□□□□ 0.41
USP6P35125 KCTD14-202ENST00000533144 904 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
USP6P35125 DEGS2-202ENST00000553834 421 ntTSL 3 BASIC17.64■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 118.3 ms