Protein–RNA interactions for Protein: P18085

ARF4, ADP-ribosylation factor 4, humanhuman

Predicted RBP Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARF4P18085 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
ARF4P18085 ZBTB1-201ENST00000358738 4119 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
ARF4P18085 AC007389.3-201ENST00000420724 1656 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
ARF4P18085 VOPP1-206ENST00000428097 1671 ntTSL 3 BASIC14.51□□□□□ -0.09
ARF4P18085 PIGG-205ENST00000503111 2629 ntTSL 2 BASIC14.51□□□□□ -0.09
ARF4P18085 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC14.51□□□□□ -0.09
ARF4P18085 HMGCL-203ENST00000374490 1600 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
ARF4P18085 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
ARF4P18085 MIR497HG-202ENST00000572453 3838 ntBASIC14.51□□□□□ -0.09
ARF4P18085 TMUB2-205ENST00000587172 1598 ntTSL 2 BASIC14.51□□□□□ -0.09
ARF4P18085 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
ARF4P18085 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
ARF4P18085 RC3H2-205ENST00000423239 3623 ntTSL 5 BASIC14.51□□□□□ -0.09
ARF4P18085 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
ARF4P18085 SYNPR-209ENST00000478300 2709 ntAPPRIS P4 TSL 1 (best) BASIC14.5□□□□□ -0.09
ARF4P18085 CLIP2-203ENST00000395060 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
ARF4P18085 SRPRA-201ENST00000332118 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
ARF4P18085 DDR1-225ENST00000376568 3894 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
ARF4P18085 PLEKHG6-202ENST00000304581 1424 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
ARF4P18085 WIPI1-201ENST00000262139 1832 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
ARF4P18085 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
ARF4P18085 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
ARF4P18085 SLC7A8-205ENST00000453702 1752 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
ARF4P18085 MTHFSD-204ENST00000546093 2451 ntTSL 2 BASIC14.5□□□□□ -0.09
ARF4P18085 DDX19B-213ENST00000568625 1681 ntTSL 2 BASIC14.5□□□□□ -0.09
ARF4P18085 DKFZP434A062-201ENST00000573103 5021 ntBASIC14.5□□□□□ -0.09
ARF4P18085 FOXP1-202ENST00000318789 7114 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
ARF4P18085 FOXP1-222ENST00000615603 7140 ntTSL 5 BASIC14.5□□□□□ -0.09
ARF4P18085 TAC4-203ENST00000352793 564 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
ARF4P18085 MRPS11-202ENST00000353598 766 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
ARF4P18085 TRPM3-205ENST00000361823 1260 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
ARF4P18085 AIG1-203ENST00000367596 559 ntTSL 2 BASIC14.5□□□□□ -0.09
ARF4P18085 TMEM95-202ENST00000389982 1191 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
ARF4P18085 AL356653.1-201ENST00000402743 360 ntBASIC14.5□□□□□ -0.09
ARF4P18085 RPS7-202ENST00000403564 764 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
ARF4P18085 HDHD5-AS1-202ENST00000431923 616 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
ARF4P18085 IGHV3-43-201ENST00000434710 434 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
ARF4P18085 AC114781.1-201ENST00000450559 1028 ntBASIC14.5□□□□□ -0.09
ARF4P18085 RN7SL684P-201ENST00000465665 294 ntBASIC14.5□□□□□ -0.09
ARF4P18085 RPS18P9-201ENST00000482817 460 ntBASIC14.5□□□□□ -0.09
ARF4P18085 AC090200.1-201ENST00000522918 590 ntTSL 2 BASIC14.5□□□□□ -0.09
ARF4P18085 AC099524.1-203ENST00000565272 756 ntTSL 5 BASIC14.5□□□□□ -0.09
ARF4P18085 AC012146.4-201ENST00000575546 271 ntBASIC14.5□□□□□ -0.09
ARF4P18085 AC127496.3-201ENST00000576032 494 ntTSL 3 BASIC14.5□□□□□ -0.09
ARF4P18085 PRMT1P1-201ENST00000604252 1009 ntBASIC14.5□□□□□ -0.09
ARF4P18085 AL162731.1-201ENST00000613248 876 ntTSL 3 BASIC14.5□□□□□ -0.09
ARF4P18085 AL591424.3-201ENST00000614278 872 ntBASIC14.5□□□□□ -0.09
ARF4P18085 C2orf27AP1-201ENST00000618128 586 ntBASIC14.5□□□□□ -0.09
ARF4P18085 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC14.5□□□□□ -0.09
ARF4P18085 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
ARF4P18085 C7orf57-204ENST00000435376 1925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
ARF4P18085 SERPINA1-209ENST00000449399 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
ARF4P18085 C7orf57-206ENST00000539619 1927 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
ARF4P18085 CIITA-213ENST00000618327 4657 ntAPPRIS ALT2 TSL 2 BASIC14.5□□□□□ -0.09
ARF4P18085 EHMT2-203ENST00000375537 3965 ntAPPRIS P4 TSL 1 (best) BASIC14.5□□□□□ -0.09
ARF4P18085 ALKBH1-201ENST00000216489 2594 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
ARF4P18085 STMN1-206ENST00000455785 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
ARF4P18085 FGD6-203ENST00000546711 4568 ntTSL 5 BASIC14.5□□□□□ -0.09
ARF4P18085 SELENON-201ENST00000354177 4227 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
ARF4P18085 AC002350.2-201ENST00000623894 1828 ntBASIC14.5□□□□□ -0.09
ARF4P18085 PLEKHB2-205ENST00000409279 2488 ntAPPRIS ALT1 TSL 2 BASIC14.5□□□□□ -0.09
ARF4P18085 CLPB-209ENST00000538039 3078 ntAPPRIS ALT1 TSL 2 BASIC14.5□□□□□ -0.09
ARF4P18085 FAM189A2-202ENST00000303068 2051 ntTSL 2 BASIC14.5□□□□□ -0.09
ARF4P18085 BCCIP-203ENST00000368759 1433 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
ARF4P18085 KIAA0391-211ENST00000605870 1406 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
ARF4P18085 DGCR8-201ENST00000351989 4514 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
ARF4P18085 MLPH-202ENST00000338530 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
ARF4P18085 GPSM2-202ENST00000406462 7433 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
ARF4P18085 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
ARF4P18085 SLC5A9-210ENST00000533824 2219 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
ARF4P18085 SGK2-203ENST00000373092 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
ARF4P18085 SYT1-204ENST00000457153 4592 ntAPPRIS ALT1 TSL 1 (best) BASIC14.49□□□□□ -0.09
ARF4P18085 PRPSAP1-206ENST00000446526 3660 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
ARF4P18085 CTBP1-AS2-206ENST00000581398 5652 ntBASIC14.49□□□□□ -0.09
ARF4P18085 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
ARF4P18085 MRPL35-201ENST00000254644 1061 ntAPPRIS ALT1 TSL 1 (best) BASIC14.49□□□□□ -0.09
ARF4P18085 EDDM3B-201ENST00000326783 896 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
ARF4P18085 ZNF614-202ENST00000356322 1293 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
ARF4P18085 MUC1-207ENST00000368392 1032 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
ARF4P18085 MUC1-208ENST00000368393 937 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
ARF4P18085 CDKN2C-202ENST00000371761 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
ARF4P18085 CLIC1-209ENST00000395892 1197 ntAPPRIS P1 TSL 3 BASIC14.49□□□□□ -0.09
ARF4P18085 HNF1A-AS1-201ENST00000433033 612 ntTSL 3 BASIC14.49□□□□□ -0.09
ARF4P18085 AL365436.2-201ENST00000434112 526 ntTSL 4 BASIC14.49□□□□□ -0.09
ARF4P18085 HLA-W-207ENST00000439514 771 ntBASIC14.49□□□□□ -0.09
ARF4P18085 GSS-202ENST00000451957 1092 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
ARF4P18085 PSME2P2-201ENST00000453033 700 ntBASIC14.49□□□□□ -0.09
ARF4P18085 IL2RG-204ENST00000456850 540 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
ARF4P18085 MUC1-213ENST00000462215 1189 ntTSL 2 BASIC14.49□□□□□ -0.09
ARF4P18085 AP000866.5-201ENST00000531241 445 ntTSL 5 BASIC14.49□□□□□ -0.09
ARF4P18085 MKRN3-202ENST00000564592 629 ntTSL 3 BASIC14.49□□□□□ -0.09
ARF4P18085 KLKP1-202ENST00000597246 1125 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
ARF4P18085 HTR4-213ENST00000631296 1224 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
ARF4P18085 ABCG8-201ENST00000272286 2665 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
ARF4P18085 USP3-204ENST00000540797 5474 ntTSL 2 BASIC14.49□□□□□ -0.09
ARF4P18085 RSBN1-204ENST00000612242 6592 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
ARF4P18085 LINC01725-203ENST00000417975 3177 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
ARF4P18085 BMT2-201ENST00000297145 3981 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
ARF4P18085 GET4-202ENST00000407192 4356 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
ARF4P18085 OPA1-202ENST00000361510 6492 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 57.8 ms