Protein–RNA interactions for Protein: P04406

GAPDH, Glyceraldehyde-3-phosphate dehydrogenase, humanhuman

Known RBP Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDHP04406 BLCAP-204ENST00000397135 685 ntAPPRIS P1 TSL 4 BASIC11.36□□□□□ -0.59
GAPDHP04406 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
GAPDHP04406 LINC00265-2P-201ENST00000413372 782 ntBASIC11.36□□□□□ -0.59
GAPDHP04406 AC034228.2-201ENST00000432558 459 ntTSL 3 BASIC11.36□□□□□ -0.59
GAPDHP04406 CCDC18-AS1-219ENST00000451302 1212 ntTSL 3 BASIC11.36□□□□□ -0.59
GAPDHP04406 LRRC75A-AS1-209ENST00000481027 1016 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
GAPDHP04406 LINC02417-201ENST00000542449 515 ntTSL 2 BASIC11.36□□□□□ -0.59
GAPDHP04406 ACTG1P17-201ENST00000558391 1119 ntBASIC11.36□□□□□ -0.59
GAPDHP04406 AC107871.2-202ENST00000563057 396 ntTSL 2 BASIC11.36□□□□□ -0.59
GAPDHP04406 AC026803.1-201ENST00000569130 274 ntBASIC11.36□□□□□ -0.59
GAPDHP04406 AC132825.4-202ENST00000578792 434 ntBASIC11.36□□□□□ -0.59
GAPDHP04406 MIR3619-201ENST00000579667 83 ntBASIC11.36□□□□□ -0.59
GAPDHP04406 LRRC75A-AS1-226ENST00000582911 879 ntTSL 5 BASIC11.36□□□□□ -0.59
GAPDHP04406 AC020922.3-201ENST00000595064 547 ntBASIC11.36□□□□□ -0.59
GAPDHP04406 LINC00969-294ENST00000627609 992 ntTSL 5 BASIC11.36□□□□□ -0.59
GAPDHP04406 TECTA-201ENST00000264037 6468 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
GAPDHP04406 IRAK1BP1-201ENST00000369940 5656 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
GAPDHP04406 TRIM21-201ENST00000254436 1924 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
GAPDHP04406 CATSPERE-202ENST00000366533 3019 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
GAPDHP04406 RSPO2-201ENST00000276659 3111 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
GAPDHP04406 GPR12-202ENST00000405846 4850 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
GAPDHP04406 ZCCHC17-207ENST00000616859 1458 ntTSL 4 BASIC11.36□□□□□ -0.59
GAPDHP04406 ZCCHC17-208ENST00000618216 1489 ntTSL 3 BASIC11.36□□□□□ -0.59
GAPDHP04406 SHMT2-203ENST00000449049 2121 ntTSL 2 BASIC11.36□□□□□ -0.59
GAPDHP04406 AP001258.1-201ENST00000501817 2110 ntTSL 5 BASIC11.36□□□□□ -0.59
GAPDHP04406 SH2D7-201ENST00000328828 2750 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
GAPDHP04406 CHRNA1-204ENST00000409323 1585 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
GAPDHP04406 AGPAT1-203ENST00000375107 2234 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
GAPDHP04406 DDX19B-202ENST00000355992 1692 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
GAPDHP04406 GPNMB-203ENST00000409458 1673 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
GAPDHP04406 CFAP65-208ENST00000453220 5877 ntAPPRIS P4 TSL 5 BASIC11.36□□□□□ -0.59
GAPDHP04406 CAPN8-201ENST00000366872 2427 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
GAPDHP04406 CTAGE13P-201ENST00000416709 2446 ntBASIC11.36□□□□□ -0.59
GAPDHP04406 NDRG2-201ENST00000298684 1784 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
GAPDHP04406 AC093797.1-201ENST00000411847 1789 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
GAPDHP04406 DCAF13-209ENST00000616836 2639 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
GAPDHP04406 RBM15-201ENST00000369784 4244 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
GAPDHP04406 AC008764.8-201ENST00000623966 2717 ntBASIC11.36□□□□□ -0.59
GAPDHP04406 GRAMD4-201ENST00000361034 4315 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
GAPDHP04406 EPS15L1-201ENST00000248070 2924 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
GAPDHP04406 ACSM2B-201ENST00000329697 2935 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
GAPDHP04406 PIK3AP1-201ENST00000339364 4803 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
GAPDHP04406 C10orf105-202ENST00000441508 4836 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
GAPDHP04406 APTX-211ENST00000463596 1345 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
GAPDHP04406 SYNJ2-208ENST00000640338 3959 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
GAPDHP04406 ADM2-202ENST00000395738 4276 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
GAPDHP04406 GRIA4-201ENST00000282499 5508 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
GAPDHP04406 PDE1B-203ENST00000538346 1711 ntTSL 2 BASIC11.35□□□□□ -0.59
GAPDHP04406 PAX3-205ENST00000392069 3170 ntTSL 5 BASIC11.35□□□□□ -0.59
GAPDHP04406 PIAS2-201ENST00000324794 4543 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
GAPDHP04406 PTCD2-212ENST00000543322 2029 ntTSL 2 BASIC11.35□□□□□ -0.59
GAPDHP04406 TMEM145-203ENST00000598766 2011 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
GAPDHP04406 IKZF1-206ENST00000359197 3487 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
GAPDHP04406 UNC93A-201ENST00000230256 2116 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
GAPDHP04406 DUOX2-201ENST00000389039 6533 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
GAPDHP04406 NOP2-212ENST00000541778 3038 ntTSL 2 BASIC11.35□□□□□ -0.59
GAPDHP04406 SEC61B-201ENST00000223641 545 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
GAPDHP04406 PLAC8L1-201ENST00000311450 638 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
GAPDHP04406 OPN1MW2-201ENST00000369929 1261 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
GAPDHP04406 MIR645-201ENST00000385283 94 ntBASIC11.35□□□□□ -0.59
GAPDHP04406 AC079807.2-203ENST00000417692 656 ntTSL 2 BASIC11.35□□□□□ -0.59
GAPDHP04406 PDIA3P2-201ENST00000428073 158 ntBASIC11.35□□□□□ -0.59
GAPDHP04406 FOXP4-AS1-203ENST00000439386 404 ntTSL 3 BASIC11.35□□□□□ -0.59
GAPDHP04406 AP000358.1-201ENST00000456260 156 ntBASIC11.35□□□□□ -0.59
GAPDHP04406 SEC61B-203ENST00000498603 587 ntTSL 3 BASIC11.35□□□□□ -0.59
GAPDHP04406 AC010285.2-201ENST00000510240 569 ntTSL 4 BASIC11.35□□□□□ -0.59
GAPDHP04406 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC11.35□□□□□ -0.59
GAPDHP04406 PPFIBP1-204ENST00000535047 875 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
GAPDHP04406 UBE3B-206ENST00000536398 1120 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
GAPDHP04406 MESP2-203ENST00000560219 859 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
GAPDHP04406 SHBG-207ENST00000570547 801 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
GAPDHP04406 C17orf50-202ENST00000604830 477 ntTSL 3 BASIC11.35□□□□□ -0.59
GAPDHP04406 PLEKHB2-211ENST00000628582 1297 ntTSL 2 BASIC11.35□□□□□ -0.59
GAPDHP04406 MBD3L2B-201ENST00000636986 860 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
GAPDHP04406 CRISP2-201ENST00000339139 1382 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
GAPDHP04406 ELP5-203ENST00000396627 1389 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
GAPDHP04406 KRT8P43-201ENST00000406052 1458 ntBASIC11.35□□□□□ -0.59
GAPDHP04406 LINC01229-201ENST00000561510 1494 ntTSL 5 BASIC11.35□□□□□ -0.59
GAPDHP04406 AP4M1-204ENST00000421755 1572 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
GAPDHP04406 AC093462.1-201ENST00000621167 1683 ntBASIC11.35□□□□□ -0.59
GAPDHP04406 KCTD18-202ENST00000409157 2556 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
GAPDHP04406 TCAF2-201ENST00000357344 2958 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
GAPDHP04406 HMBOX1-203ENST00000397358 4082 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
GAPDHP04406 GOLGA6L4-202ENST00000422563 4155 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
GAPDHP04406 GREB1-206ENST00000396123 5296 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
GAPDHP04406 LPCAT2-201ENST00000262134 5391 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
GAPDHP04406 BTBD9-206ENST00000481247 8525 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
GAPDHP04406 COL3A1-201ENST00000304636 5543 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
GAPDHP04406 BNIP3L-201ENST00000380629 3610 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
GAPDHP04406 GGTA1P-202ENST00000481534 3429 ntTSL 2 BASIC11.35□□□□□ -0.59
GAPDHP04406 PCCB-210ENST00000471595 6090 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
GAPDHP04406 HPSE2-201ENST00000370546 1849 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
GAPDHP04406 GMEB2-201ENST00000266068 4559 ntAPPRIS P1 TSL 2 BASIC11.35□□□□□ -0.59
GAPDHP04406 AL353608.3-202ENST00000429953 4384 ntTSL 5 BASIC11.35□□□□□ -0.59
GAPDHP04406 TARBP2-202ENST00000394357 1402 ntTSL 3 BASIC11.35□□□□□ -0.59
GAPDHP04406 SLC47A1-206ENST00000571335 1415 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
GAPDHP04406 REST-208ENST00000619101 7114 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
GAPDHP04406 ADAMTSL4-202ENST00000369038 4167 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
GAPDHP04406 PAX2-201ENST00000355243 4057 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
GAPDHP04406 LLGL1-203ENST00000621229 3187 ntTSL 5 BASIC11.34□□□□□ -0.59
Retrieved 100 of 98,524 protein–RNA pairs in 81.5 ms