Protein–RNA interactions for Protein: P02654

APOC1, Apolipoprotein C-I, humanhuman

Predictions only

Length 83 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1P02654 LPCAT1-201ENST00000283415 3966 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
APOC1P02654 EBF1-201ENST00000313708 5250 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
APOC1P02654 PLCXD1-201ENST00000381657 5507 ntAPPRIS P2 TSL 5 BASIC12.04□□□□□ -0.48
APOC1P02654 TRIM4-201ENST00000349062 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
APOC1P02654 GRM2-202ENST00000395052 3151 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
APOC1P02654 CYP4F11-201ENST00000248041 2977 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
APOC1P02654 CNOT7-211ENST00000523917 1885 ntTSL 2 BASIC12.04□□□□□ -0.48
APOC1P02654 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC12.04□□□□□ -0.48
APOC1P02654 COX18-201ENST00000295890 6846 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
APOC1P02654 ESYT1-202ENST00000394048 4388 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
APOC1P02654 EGFR-AS1-201ENST00000442411 2806 ntTSL 2 BASIC12.04□□□□□ -0.48
APOC1P02654 SEC13-203ENST00000383801 1479 ntTSL 2 BASIC12.04□□□□□ -0.48
APOC1P02654 PTPN6-202ENST00000399448 2159 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
APOC1P02654 DCAF11-204ENST00000446197 4299 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
APOC1P02654 NPAP1-201ENST00000329468 7526 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
APOC1P02654 PLAC8L1-201ENST00000311450 638 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
APOC1P02654 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
APOC1P02654 C1orf159-201ENST00000379319 1097 ntAPPRIS P3 TSL 5 BASIC12.04□□□□□ -0.48
APOC1P02654 NME4-203ENST00000397722 1232 ntTSL 2 BASIC12.04□□□□□ -0.48
APOC1P02654 PTPA-217ENST00000434095 870 ntTSL 2 BASIC12.04□□□□□ -0.48
APOC1P02654 AL139420.1-201ENST00000439394 653 ntTSL 3 BASIC12.04□□□□□ -0.48
APOC1P02654 DUTP3-201ENST00000450025 415 ntBASIC12.04□□□□□ -0.48
APOC1P02654 OAZ3-203ENST00000453029 729 ntTSL 5 BASIC12.04□□□□□ -0.48
APOC1P02654 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
APOC1P02654 RN7SL788P-201ENST00000460504 316 ntBASIC12.04□□□□□ -0.48
APOC1P02654 KRT8P13-201ENST00000463294 1010 ntBASIC12.04□□□□□ -0.48
APOC1P02654 LRRC75A-AS1-209ENST00000481027 1016 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
APOC1P02654 ZNF124-204ENST00000491356 956 ntTSL 2 BASIC12.04□□□□□ -0.48
APOC1P02654 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
APOC1P02654 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC12.04□□□□□ -0.48
APOC1P02654 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
APOC1P02654 PUDP-206ENST00000540122 825 ntTSL 2 BASIC12.04□□□□□ -0.48
APOC1P02654 KLF17P1-201ENST00000547105 1126 ntBASIC12.04□□□□□ -0.48
APOC1P02654 AL161670.2-201ENST00000557650 1227 ntBASIC12.04□□□□□ -0.48
APOC1P02654 MESP2-203ENST00000560219 859 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
APOC1P02654 NAT9-220ENST00000582870 896 ntTSL 5 BASIC12.04□□□□□ -0.48
APOC1P02654 LRRC75A-AS1-226ENST00000582911 879 ntTSL 5 BASIC12.04□□□□□ -0.48
APOC1P02654 PIN1-207ENST00000588695 648 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
APOC1P02654 AC243960.2-201ENST00000600996 747 ntBASIC12.04□□□□□ -0.48
APOC1P02654 Metazoa_SRP.141-201ENST00000615072 282 ntBASIC12.04□□□□□ -0.48
APOC1P02654 SNRPA1-216ENST00000626000 539 ntTSL 5 BASIC12.04□□□□□ -0.48
APOC1P02654 GRIP2-205ENST00000621039 7752 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
APOC1P02654 HDAC2-205ENST00000519065 9874 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
APOC1P02654 NCSTN-201ENST00000294785 2936 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
APOC1P02654 ZCCHC12-201ENST00000310164 2231 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
APOC1P02654 ZFP1-201ENST00000332307 1502 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
APOC1P02654 GUCY1B3-205ENST00000505764 2456 ntTSL 2 BASIC12.04□□□□□ -0.48
APOC1P02654 ARRB2-204ENST00000412477 1779 ntTSL 2 BASIC12.04□□□□□ -0.48
APOC1P02654 ETNPPL-202ENST00000411864 2028 ntAPPRIS ALT1 TSL 1 (best) BASIC12.04□□□□□ -0.48
APOC1P02654 TLE3-208ENST00000557907 2295 ntAPPRIS ALT1 TSL 1 (best) BASIC12.04□□□□□ -0.48
APOC1P02654 CATSPERD-202ENST00000381624 2516 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
APOC1P02654 COL4A6-209ENST00000545689 6380 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
APOC1P02654 CRY2-212ENST00000616623 4204 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
APOC1P02654 TLK1-205ENST00000431350 5663 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
APOC1P02654 RBM25-204ENST00000526754 1567 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
APOC1P02654 ZBTB7B-203ENST00000417934 4017 ntAPPRIS ALT2 TSL 2 BASIC12.04□□□□□ -0.48
APOC1P02654 OPRK1-201ENST00000265572 5014 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
APOC1P02654 CPPED1-202ENST00000381774 6273 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
APOC1P02654 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
APOC1P02654 SEMA6D-206ENST00000389428 5874 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
APOC1P02654 MAP1S-202ENST00000544059 3399 ntAPPRIS ALT2 TSL 2 BASIC12.04□□□□□ -0.48
APOC1P02654 GABRR2-201ENST00000402938 1682 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
APOC1P02654 SERF1B-204ENST00000506542 1666 ntTSL 3 BASIC12.03□□□□□ -0.48
APOC1P02654 YY1AP1-208ENST00000361831 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
APOC1P02654 AL359915.2-202ENST00000440150 2469 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
APOC1P02654 POC5-202ENST00000428202 2229 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
APOC1P02654 SLC44A3-AS1-215ENST00000634870 5956 ntTSL 5 BASIC12.03□□□□□ -0.48
APOC1P02654 AAGAB-207ENST00000561452 2251 ntTSL 5 BASIC12.03□□□□□ -0.48
APOC1P02654 RNASE7-201ENST00000298690 1498 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
APOC1P02654 SEMA6A-202ENST00000343348 6878 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
APOC1P02654 RAB15-201ENST00000267512 3391 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
APOC1P02654 SHANK2-211ENST00000449833 8850 ntTSL 5 BASIC12.03□□□□□ -0.48
APOC1P02654 PPP2R2C-204ENST00000506140 1780 ntTSL 2 BASIC12.03□□□□□ -0.48
APOC1P02654 FAM225B-201ENST00000423546 5629 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
APOC1P02654 SYNRG-229ENST00000621136 4841 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
APOC1P02654 CDH8-201ENST00000299345 3728 ntTSL 5 BASIC12.03□□□□□ -0.48
APOC1P02654 PINX1-201ENST00000314787 1545 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
APOC1P02654 BSDC1-201ENST00000341071 4599 ntTSL 2 BASIC12.03□□□□□ -0.48
APOC1P02654 GPR12-202ENST00000405846 4850 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
APOC1P02654 CENPL-202ENST00000356198 2357 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
APOC1P02654 CNTD1-204ENST00000588408 2369 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
APOC1P02654 VAPB-202ENST00000395802 1834 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
APOC1P02654 SYCE2-201ENST00000293695 1231 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
APOC1P02654 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
APOC1P02654 DKKL1P1-201ENST00000400550 698 ntBASIC12.03□□□□□ -0.48
APOC1P02654 TEX33-202ENST00000402860 986 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
APOC1P02654 AC069277.1-202ENST00000414438 761 ntTSL 3 BASIC12.03□□□□□ -0.48
APOC1P02654 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC12.03□□□□□ -0.48
APOC1P02654 AC005014.1-201ENST00000432006 2976 ntBASIC12.03□□□□□ -0.48
APOC1P02654 AC026320.2-201ENST00000434379 478 ntBASIC12.03□□□□□ -0.48
APOC1P02654 AL080250.1-201ENST00000438676 445 ntTSL 5 BASIC12.03□□□□□ -0.48
APOC1P02654 RPL18AP8-201ENST00000486071 528 ntBASIC12.03□□□□□ -0.48
APOC1P02654 HHIP-AS1-201ENST00000503066 897 ntTSL 5 BASIC12.03□□□□□ -0.48
APOC1P02654 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC12.03□□□□□ -0.48
APOC1P02654 AC239802.2-201ENST00000532137 554 ntTSL 4 BASIC12.03□□□□□ -0.48
APOC1P02654 REC114-202ENST00000560581 833 ntAPPRIS ALT2 TSL 2 BASIC12.03□□□□□ -0.48
APOC1P02654 AC107871.2-202ENST00000563057 396 ntTSL 2 BASIC12.03□□□□□ -0.48
APOC1P02654 MIR4265-201ENST00000582152 99 ntBASIC12.03□□□□□ -0.48
APOC1P02654 SIGLEC22P-201ENST00000599104 714 ntBASIC12.03□□□□□ -0.48
APOC1P02654 SIGLEC22P-202ENST00000602065 544 ntTSL 4 BASIC12.03□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms