Protein–RNA interactions for Protein: P46100

ATRX, Transcriptional regulator ATRX, humanhuman

Predictions only

Length 2,492 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATRXP46100 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
ATRXP46100 TRIML2-207ENST00000512729 1639 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
ATRXP46100 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC12.15□□□□□ -0.46
ATRXP46100 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC12.15□□□□□ -0.46
ATRXP46100 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
ATRXP46100 CICP16-201ENST00000502609 2813 ntBASIC12.15□□□□□ -0.46
ATRXP46100 ZNF384-204ENST00000396801 3008 ntAPPRIS P1 TSL 2 BASIC12.15□□□□□ -0.46
ATRXP46100 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
ATRXP46100 FCRLA-202ENST00000294796 766 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
ATRXP46100 EIF3F-201ENST00000309828 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
ATRXP46100 OR2V2-201ENST00000328275 948 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
ATRXP46100 S100B-202ENST00000367071 971 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
ATRXP46100 CBWD5-208ENST00000429800 1234 ntTSL 2 BASIC12.15□□□□□ -0.46
ATRXP46100 C9orf147-203ENST00000460965 446 ntTSL 3 BASIC12.15□□□□□ -0.46
ATRXP46100 AC109466.1-201ENST00000517508 804 ntTSL 4 BASIC12.15□□□□□ -0.46
ATRXP46100 MYL6B-207ENST00000550443 1034 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
ATRXP46100 MYL6B-210ENST00000552568 703 ntTSL 5 BASIC12.15□□□□□ -0.46
ATRXP46100 AC018868.2-201ENST00000559655 1259 ntBASIC12.15□□□□□ -0.46
ATRXP46100 AL137785.1-201ENST00000637466 490 ntTSL 5 BASIC12.15□□□□□ -0.46
ATRXP46100 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC12.15□□□□□ -0.46
ATRXP46100 ZCCHC9-203ENST00000407610 1555 ntAPPRIS P1 TSL 2 BASIC12.15□□□□□ -0.46
ATRXP46100 FAM238C-202ENST00000639963 1787 ntTSL 2 BASIC12.15□□□□□ -0.46
ATRXP46100 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC12.15□□□□□ -0.46
ATRXP46100 ZMYND15-206ENST00000592813 2274 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
ATRXP46100 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC12.15□□□□□ -0.46
ATRXP46100 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC12.15□□□□□ -0.46
ATRXP46100 GFPT2-201ENST00000253778 3093 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
ATRXP46100 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
ATRXP46100 SLC25A29-208ENST00000554912 5169 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
ATRXP46100 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
ATRXP46100 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC12.15□□□□□ -0.46
ATRXP46100 PARVB-201ENST00000338758 5429 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
ATRXP46100 SRRM1-201ENST00000323848 4011 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
ATRXP46100 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC12.15□□□□□ -0.46
ATRXP46100 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC12.15□□□□□ -0.46
ATRXP46100 ZFHX4-AS1-201ENST00000518143 1711 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
ATRXP46100 LINC00865-202ENST00000448963 4272 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
ATRXP46100 CDH16-204ENST00000565796 2694 ntTSL 2 BASIC12.15□□□□□ -0.46
ATRXP46100 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC12.15□□□□□ -0.46
ATRXP46100 PIGB-202ENST00000539642 1668 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
ATRXP46100 CCNJ-201ENST00000265992 4115 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
ATRXP46100 HLA-DOB-206ENST00000438763 1372 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
ATRXP46100 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
ATRXP46100 CLNS1A-201ENST00000263309 1172 ntTSL 3 BASIC12.15□□□□□ -0.46
ATRXP46100 CR769775.1-203ENST00000399894 579 ntTSL 3 BASIC12.15□□□□□ -0.46
ATRXP46100 AL356653.1-201ENST00000402743 360 ntBASIC12.15□□□□□ -0.46
ATRXP46100 FHIT-205ENST00000476844 1033 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
ATRXP46100 NT5CP2-201ENST00000553305 561 ntBASIC12.15□□□□□ -0.46
ATRXP46100 AC109631.1-201ENST00000559695 781 ntBASIC12.15□□□□□ -0.46
ATRXP46100 IGHV1OR16-2-201ENST00000564937 349 ntBASIC12.15□□□□□ -0.46
ATRXP46100 AC021594.2-201ENST00000592499 527 ntTSL 3 BASIC12.15□□□□□ -0.46
ATRXP46100 PRKN-210ENST00000612540 603 ntTSL 5 BASIC12.15□□□□□ -0.46
ATRXP46100 TNNI2-206ENST00000617947 699 ntAPPRIS ALT1 TSL 5 BASIC12.15□□□□□ -0.46
ATRXP46100 AC138430.2-201ENST00000624068 504 ntBASIC12.15□□□□□ -0.46
ATRXP46100 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
ATRXP46100 GK-205ENST00000378946 3638 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
ATRXP46100 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC12.15□□□□□ -0.46
ATRXP46100 PRAME-214ENST00000543184 2758 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
ATRXP46100 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
ATRXP46100 PRKACB-205ENST00000370688 1905 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
ATRXP46100 FBN2-204ENST00000508053 11132 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.47
ATRXP46100 FMO6P-201ENST00000236166 1620 ntBASIC12.15□□□□□ -0.47
ATRXP46100 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC12.15□□□□□ -0.47
ATRXP46100 SPRED1-201ENST00000299084 7780 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
ATRXP46100 MAGEA4-202ENST00000360243 1773 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
ATRXP46100 MAGEA4-203ENST00000370335 1773 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
ATRXP46100 MAGEA4-204ENST00000370340 1773 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
ATRXP46100 KRT8P24-201ENST00000560290 1559 ntBASIC12.14□□□□□ -0.47
ATRXP46100 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC12.14□□□□□ -0.47
ATRXP46100 ELOVL1-202ENST00000413844 1451 ntTSL 2 BASIC12.14□□□□□ -0.47
ATRXP46100 BARD1-214ENST00000620057 1456 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
ATRXP46100 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC12.14□□□□□ -0.47
ATRXP46100 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC12.14□□□□□ -0.47
ATRXP46100 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
ATRXP46100 KCNK16-202ENST00000373229 1248 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
ATRXP46100 AC008937.1-201ENST00000453721 914 ntTSL 3 BASIC12.14□□□□□ -0.47
ATRXP46100 AL589674.1-201ENST00000454401 222 ntTSL 5 BASIC12.14□□□□□ -0.47
ATRXP46100 AADAC-202ENST00000488869 719 ntTSL 2 BASIC12.14□□□□□ -0.47
ATRXP46100 AC116049.1-201ENST00000505282 385 ntBASIC12.14□□□□□ -0.47
ATRXP46100 DPPA5P4-201ENST00000559021 365 ntBASIC12.14□□□□□ -0.47
ATRXP46100 AC009118.3-201ENST00000622896 873 ntBASIC12.14□□□□□ -0.47
ATRXP46100 AP1G2-201ENST00000308724 3298 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
ATRXP46100 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
ATRXP46100 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
ATRXP46100 PSMA1-201ENST00000396394 1505 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
ATRXP46100 XYLT2-201ENST00000017003 3507 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
ATRXP46100 EOGT-202ENST00000383701 4731 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
ATRXP46100 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
ATRXP46100 RRAGD-201ENST00000359203 4042 ntTSL 2 BASIC12.14□□□□□ -0.47
ATRXP46100 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
ATRXP46100 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
ATRXP46100 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
ATRXP46100 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
ATRXP46100 WDR24-201ENST00000248142 2763 ntTSL 5 BASIC12.14□□□□□ -0.47
ATRXP46100 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
ATRXP46100 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
ATRXP46100 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
ATRXP46100 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
ATRXP46100 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
ATRXP46100 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC12.14□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 84.6 ms