Protein–RNA interactions for Protein: P35125

USP6, Ubiquitin carboxyl-terminal hydrolase 6, humanhuman

Predictions only

Length 1,406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP6P35125 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
USP6P35125 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
USP6P35125 PCDHA3-202ENST00000532566 4594 ntBASIC17.69■□□□□ 0.42
USP6P35125 SH2D7-202ENST00000409568 2162 ntTSL 5 BASIC17.69■□□□□ 0.42
USP6P35125 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
USP6P35125 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
USP6P35125 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
USP6P35125 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
USP6P35125 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
USP6P35125 GPER1-203ENST00000397092 2971 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
USP6P35125 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
USP6P35125 ACER1-201ENST00000301452 1445 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
USP6P35125 AC144450.1-201ENST00000366424 1641 ntTSL 2 BASIC17.68■□□□□ 0.42
USP6P35125 AC007666.1-201ENST00000443935 1838 ntTSL 5 BASIC17.68■□□□□ 0.42
USP6P35125 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
USP6P35125 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
USP6P35125 MAPT-IT1-201ENST00000624111 3016 ntBASIC17.68■□□□□ 0.42
USP6P35125 PRCP-201ENST00000313010 3090 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
USP6P35125 MCRIP1-207ENST00000574190 2775 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
USP6P35125 CYP2J2-201ENST00000371204 1896 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
USP6P35125 SGCE-201ENST00000265735 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
USP6P35125 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
USP6P35125 LINC00682-202ENST00000499082 1384 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
USP6P35125 AC015959.1-201ENST00000623263 1377 ntBASIC17.68■□□□□ 0.42
USP6P35125 SGCA-202ENST00000344627 1057 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
USP6P35125 PLPP4-201ENST00000369073 1135 ntTSL 5 BASIC17.68■□□□□ 0.42
USP6P35125 SNCG-202ENST00000372017 701 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
USP6P35125 MIR181D-201ENST00000384853 137 ntBASIC17.68■□□□□ 0.42
USP6P35125 AL391903.1-201ENST00000407513 365 ntBASIC17.68■□□□□ 0.42
USP6P35125 RPL21P135-201ENST00000442539 791 ntBASIC17.68■□□□□ 0.42
USP6P35125 VEGFA-210ENST00000457104 414 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
USP6P35125 VEGFA-218ENST00000518689 630 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
USP6P35125 VEGFA-223ENST00000523125 541 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
USP6P35125 AP001979.2-201ENST00000526254 975 ntTSL 5 BASIC17.68■□□□□ 0.42
USP6P35125 AC103706.1-201ENST00000561761 679 ntBASIC17.68■□□□□ 0.42
USP6P35125 AC084262.1-201ENST00000567818 751 ntBASIC17.68■□□□□ 0.42
USP6P35125 PDZRN3-AS1-202ENST00000608304 774 ntTSL 5 BASIC17.68■□□□□ 0.42
USP6P35125 AC091736.1-201ENST00000609370 305 ntBASIC17.68■□□□□ 0.42
USP6P35125 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
USP6P35125 FAM90A1-203ENST00000538603 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
USP6P35125 BANP-203ENST00000393207 2438 ntTSL 2 BASIC17.68■□□□□ 0.42
USP6P35125 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
USP6P35125 ZSCAN32-202ENST00000396846 3173 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
USP6P35125 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
USP6P35125 AC004471.2-201ENST00000609936 1514 ntTSL 3 BASIC17.68■□□□□ 0.42
USP6P35125 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
USP6P35125 CNTD1-204ENST00000588408 2369 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
USP6P35125 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC17.68■□□□□ 0.42
USP6P35125 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
USP6P35125 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
USP6P35125 GNG4-201ENST00000366597 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
USP6P35125 FAM114A2-211ENST00000520667 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
USP6P35125 ALKBH1-201ENST00000216489 2594 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
USP6P35125 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
USP6P35125 CDCA7L-202ENST00000373934 1830 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
USP6P35125 MT1F-201ENST00000334350 690 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
USP6P35125 CMC4-201ENST00000369479 864 ntAPPRIS P1 TSL 3 BASIC17.67■□□□□ 0.42
USP6P35125 PARK7-204ENST00000377493 795 ntTSL 2 BASIC17.67■□□□□ 0.42
USP6P35125 AC006967.2-201ENST00000426169 432 ntTSL 3 BASIC17.67■□□□□ 0.42
USP6P35125 AL929472.4-201ENST00000447422 691 ntBASIC17.67■□□□□ 0.42
USP6P35125 ASS1P9-201ENST00000513426 1236 ntBASIC17.67■□□□□ 0.42
USP6P35125 MYOZ3-205ENST00000520112 605 ntTSL 4 BASIC17.67■□□□□ 0.42
USP6P35125 PDCD2-205ENST00000537445 1114 ntTSL 3 BASIC17.67■□□□□ 0.42
USP6P35125 IGHV1OR16-3-201ENST00000568138 205 ntBASIC17.67■□□□□ 0.42
USP6P35125 MIR5193-201ENST00000584510 109 ntBASIC17.67■□□□□ 0.42
USP6P35125 AL138828.1-208ENST00000585946 824 ntTSL 5 BASIC17.67■□□□□ 0.42
USP6P35125 PPY-202ENST00000587006 431 ntTSL 3 BASIC17.67■□□□□ 0.42
USP6P35125 MRPL34-206ENST00000602206 603 ntTSL 3 BASIC17.67■□□□□ 0.42
USP6P35125 DUSP22-206ENST00000603453 804 ntTSL 4 BASIC17.67■□□□□ 0.42
USP6P35125 LUC7L3-223ENST00000625349 408 ntTSL 2 BASIC17.67■□□□□ 0.42
USP6P35125 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
USP6P35125 SERPINA1-205ENST00000404814 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
USP6P35125 SCHIP1-201ENST00000445224 1645 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
USP6P35125 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC17.67■□□□□ 0.42
USP6P35125 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
USP6P35125 SLC45A2-201ENST00000296589 1772 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
USP6P35125 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
USP6P35125 RHBDL2-201ENST00000289248 2129 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
USP6P35125 LINC01257-201ENST00000376678 2473 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
USP6P35125 LUC7L-203ENST00000397780 1335 ntTSL 5 BASIC17.67■□□□□ 0.42
USP6P35125 EHMT2-202ENST00000375530 3856 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
USP6P35125 METTL12-203ENST00000532971 2037 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
USP6P35125 SEZ6L-206ENST00000404234 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
USP6P35125 ANXA13-201ENST00000262219 1588 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
USP6P35125 AC034238.1-214ENST00000609699 1590 ntTSL 5 BASIC17.67■□□□□ 0.42
USP6P35125 CRISPLD2-209ENST00000567845 2178 ntAPPRIS ALT1 TSL 5 BASIC17.67■□□□□ 0.42
USP6P35125 KRT40-201ENST00000377755 1812 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
USP6P35125 ATG9B-203ENST00000469530 3489 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
USP6P35125 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
USP6P35125 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
USP6P35125 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
USP6P35125 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC17.66■□□□□ 0.42
USP6P35125 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC17.66■□□□□ 0.42
USP6P35125 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
USP6P35125 IL18BP-202ENST00000337131 1606 ntAPPRIS P2 TSL 5 BASIC17.66■□□□□ 0.42
USP6P35125 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
USP6P35125 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
USP6P35125 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
USP6P35125 VSTM1-202ENST00000366170 654 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
USP6P35125 UGT1A6-202ENST00000373424 1128 ntTSL 2 BASIC17.66■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 104.1 ms