Protein–RNA interactions for Protein: P06727

APOA4, Apolipoprotein A-IV, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOA4P06727 CACNA1G-214ENST00000505165 6633 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
APOA4P06727 MRPL44-201ENST00000258383 1748 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
APOA4P06727 FAM187A-201ENST00000331733 3397 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
APOA4P06727 CCDC103-204ENST00000417826 3397 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
APOA4P06727 NDUFB6-203ENST00000379847 1366 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
APOA4P06727 SPAG5-AS1-201ENST00000414744 2143 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
APOA4P06727 FAM189A2-204ENST00000455972 2107 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.23
APOA4P06727 ADGRA1-201ENST00000392606 3438 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
APOA4P06727 PSMC4-201ENST00000157812 1591 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
APOA4P06727 SLX4-201ENST00000294008 7307 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.23
APOA4P06727 NAGK-202ENST00000418807 2343 ntTSL 5 BASIC13.58□□□□□ -0.23
APOA4P06727 DNMT3B-206ENST00000456297 2315 ntTSL 2 BASIC13.58□□□□□ -0.23
APOA4P06727 IKZF1-206ENST00000359197 3487 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
APOA4P06727 RAB42-201ENST00000373826 1950 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
APOA4P06727 CDH11-201ENST00000268603 6857 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
APOA4P06727 ELN-211ENST00000414324 3139 ntAPPRIS ALT2 TSL 2 BASIC13.58□□□□□ -0.24
APOA4P06727 MEIS2-215ENST00000559561 1442 ntAPPRIS ALT1 TSL 5 BASIC13.58□□□□□ -0.24
APOA4P06727 NUSAP1-208ENST00000559596 1629 ntAPPRIS P4 TSL 1 (best) BASIC13.58□□□□□ -0.24
APOA4P06727 RBM22P2-201ENST00000393978 1814 ntBASIC13.58□□□□□ -0.24
APOA4P06727 DCDC2-202ENST00000378454 4707 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
APOA4P06727 ETNPPL-202ENST00000411864 2028 ntAPPRIS ALT1 TSL 1 (best) BASIC13.58□□□□□ -0.24
APOA4P06727 AL358334.2-201ENST00000553648 4714 ntTSL 2 BASIC13.58□□□□□ -0.24
APOA4P06727 CACNA2D2-205ENST00000429770 5304 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
APOA4P06727 C19orf44-203ENST00000594035 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
APOA4P06727 CSAG1-203ENST00000370291 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
APOA4P06727 AP000356.3-201ENST00000382243 753 ntBASIC13.58□□□□□ -0.24
APOA4P06727 HLA-DMA-203ENST00000395305 777 ntBASIC13.58□□□□□ -0.24
APOA4P06727 GGTLC4P-201ENST00000402176 664 ntBASIC13.58□□□□□ -0.24
APOA4P06727 DMKN-204ENST00000408915 600 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
APOA4P06727 ACTG2-204ENST00000409918 927 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
APOA4P06727 GUSBP10-201ENST00000417412 665 ntBASIC13.58□□□□□ -0.24
APOA4P06727 AL391415.1-201ENST00000439844 400 ntTSL 3 BASIC13.58□□□□□ -0.24
APOA4P06727 EEF1DP6-201ENST00000449232 372 ntBASIC13.58□□□□□ -0.24
APOA4P06727 LINC02046-201ENST00000469812 378 ntTSL 3 BASIC13.58□□□□□ -0.24
APOA4P06727 PPP2R1A-209ENST00000477989 444 ntTSL 3 BASIC13.58□□□□□ -0.24
APOA4P06727 AC069185.1-202ENST00000533405 471 ntTSL 3 BASIC13.58□□□□□ -0.24
APOA4P06727 TNNI1-205ENST00000555948 580 ntTSL 5 BASIC13.58□□□□□ -0.24
APOA4P06727 KRT8P2-201ENST00000556193 944 ntBASIC13.58□□□□□ -0.24
APOA4P06727 AC087392.5-201ENST00000612517 489 ntBASIC13.58□□□□□ -0.24
APOA4P06727 LINC01746-201ENST00000621390 449 ntTSL 3 BASIC13.58□□□□□ -0.24
APOA4P06727 SFTA2-203ENST00000634371 815 ntTSL 5 BASIC13.58□□□□□ -0.24
APOA4P06727 IGFN1-201ENST00000295591 4439 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
APOA4P06727 ZFYVE19-209ENST00000564258 2059 ntTSL 2 BASIC13.58□□□□□ -0.24
APOA4P06727 NAA60-214ENST00000572584 2450 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
APOA4P06727 MYO7A-205ENST00000458637 7336 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
APOA4P06727 LINC01782-201ENST00000591212 2908 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
APOA4P06727 CCNE2-201ENST00000308108 2724 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
APOA4P06727 SCAF4-201ENST00000286835 4193 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
APOA4P06727 RB1-201ENST00000267163 4840 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
APOA4P06727 AC009123.1-202ENST00000565643 2551 ntTSL 2 BASIC13.58□□□□□ -0.24
APOA4P06727 AL031432.4-201ENST00000641729 2190 ntBASIC13.58□□□□□ -0.24
APOA4P06727 SEZ6L-201ENST00000248933 3248 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
APOA4P06727 SEZ6L-210ENST00000629590 3215 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
APOA4P06727 LINC00846-201ENST00000334165 1778 ntTSL 2 BASIC13.58□□□□□ -0.24
APOA4P06727 RRAGA-201ENST00000380527 1589 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
APOA4P06727 NME7-203ENST00000472647 1590 ntAPPRIS ALT2 TSL 2 BASIC13.58□□□□□ -0.24
APOA4P06727 TRPC7-202ENST00000378459 2406 ntTSL 5 BASIC13.58□□□□□ -0.24
APOA4P06727 COLEC11-201ENST00000236693 1381 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
APOA4P06727 SNHG1-213ENST00000540725 1374 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
APOA4P06727 CCL5-201ENST00000603197 1365 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
APOA4P06727 PCDHA2-202ENST00000520672 3056 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
APOA4P06727 AFF2-202ENST00000342251 7313 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
APOA4P06727 ANKRD36B-204ENST00000438709 6067 ntTSL 5 BASIC13.57□□□□□ -0.24
APOA4P06727 CADM1-204ENST00000536727 3520 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
APOA4P06727 VRK3-209ENST00000594948 1847 ntAPPRIS P3 TSL 2 BASIC13.57□□□□□ -0.24
APOA4P06727 EPB41L5-205ENST00000452780 6410 ntTSL 5 BASIC13.57□□□□□ -0.24
APOA4P06727 ZSCAN32-202ENST00000396846 3173 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
APOA4P06727 PERP-201ENST00000421351 4290 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
APOA4P06727 SNAPC2-206ENST00000597584 1413 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
APOA4P06727 DSTN-201ENST00000246069 3617 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
APOA4P06727 SGSM3-201ENST00000248929 2969 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
APOA4P06727 TMEM164-203ENST00000372072 4975 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
APOA4P06727 CCDC18-203ENST00000401026 4552 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
APOA4P06727 MYRF-202ENST00000278836 5927 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
APOA4P06727 AL031687.1-201ENST00000450586 2137 ntTSL 2 BASIC13.57□□□□□ -0.24
APOA4P06727 CNTNAP5-202ENST00000431078 5284 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
APOA4P06727 FIBCD1-202ENST00000372338 3253 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
APOA4P06727 KRT8P19-201ENST00000551916 1455 ntBASIC13.57□□□□□ -0.24
APOA4P06727 INCENP-202ENST00000394818 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
APOA4P06727 AC004846.1-201ENST00000554614 3050 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
APOA4P06727 RAB37-204ENST00000392613 2617 ntAPPRIS ALT1 TSL 2 BASIC13.57□□□□□ -0.24
APOA4P06727 AC010336.1-201ENST00000539278 4739 ntBASIC13.57□□□□□ -0.24
APOA4P06727 AC093668.2-201ENST00000481893 3569 ntTSL 2 BASIC13.57□□□□□ -0.24
APOA4P06727 AC105052.1-201ENST00000519541 3569 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
APOA4P06727 MED11-201ENST00000293777 833 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
APOA4P06727 LMO1-201ENST00000335790 1279 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
APOA4P06727 SLC25A26-201ENST00000336733 1023 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
APOA4P06727 AL512430.1-201ENST00000392575 860 ntBASIC13.57□□□□□ -0.24
APOA4P06727 AL139339.1-201ENST00000411906 657 ntTSL 2 BASIC13.57□□□□□ -0.24
APOA4P06727 AC253536.3-201ENST00000444093 558 ntTSL 3 BASIC13.57□□□□□ -0.24
APOA4P06727 MAGEA5-201ENST00000446757 942 ntBASIC13.57□□□□□ -0.24
APOA4P06727 EFCAB10-201ENST00000460135 717 ntTSL 2 BASIC13.57□□□□□ -0.24
APOA4P06727 TXNRD2-206ENST00000462330 1129 ntTSL 3 BASIC13.57□□□□□ -0.24
APOA4P06727 AC005486.1-201ENST00000466775 216 ntTSL 3 BASIC13.57□□□□□ -0.24
APOA4P06727 TAPBP-241ENST00000489157 1299 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
APOA4P06727 RN7SL564P-201ENST00000496309 250 ntBASIC13.57□□□□□ -0.24
APOA4P06727 MRPL22P1-201ENST00000505398 616 ntBASIC13.57□□□□□ -0.24
APOA4P06727 ADM-203ENST00000525063 867 ntAPPRIS P1 TSL 3 BASIC13.57□□□□□ -0.24
APOA4P06727 LMO1-204ENST00000534484 770 ntAPPRIS ALT1 TSL 5 BASIC13.57□□□□□ -0.24
APOA4P06727 AC105129.2-201ENST00000559536 390 ntBASIC13.57□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 53.3 ms