Protein–RNA interactions for Protein: P05067

APP, Amyloid-beta A4 protein, humanhuman

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APPP05067 AL135936.1-201ENST00000617956 998 ntTSL 5 BASIC16.27■□□□□ 0.2
APPP05067 NOP16-211ENST00000621444 954 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
APPP05067 AC009084.3-201ENST00000623356 437 ntBASIC16.27■□□□□ 0.2
APPP05067 AC011471.3-201ENST00000623576 402 ntBASIC16.27■□□□□ 0.2
APPP05067 LINC00431-202ENST00000636375 159 ntBASIC16.27■□□□□ 0.2
APPP05067 UBOX5-AS1-201ENST00000446537 1792 ntTSL 2 BASIC16.27■□□□□ 0.2
APPP05067 GPR88-201ENST00000315033 3491 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
APPP05067 EBF3-201ENST00000355311 2993 ntAPPRIS ALT1 TSL 5 BASIC16.27■□□□□ 0.19
APPP05067 NR3C2-209ENST00000625323 5909 ntTSL 5 BASIC16.27■□□□□ 0.19
APPP05067 KRT26-201ENST00000335552 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
APPP05067 DRD2-204ENST00000538967 1493 ntAPPRIS ALT1 TSL 5 BASIC16.27■□□□□ 0.19
APPP05067 ZNF843-202ENST00000564218 3816 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
APPP05067 GBF1-201ENST00000369983 6403 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
APPP05067 CYP51A1P3-201ENST00000400072 1428 ntBASIC16.27■□□□□ 0.19
APPP05067 FAM86C1-202ENST00000359244 2110 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.19
APPP05067 RBM6-201ENST00000266022 3750 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
APPP05067 ANKZF1-201ENST00000323348 2579 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
APPP05067 IGFN1-201ENST00000295591 4439 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
APPP05067 FIG4-201ENST00000230124 3011 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
APPP05067 Z82195.2-202ENST00000458525 1646 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
APPP05067 FBLIM1-203ENST00000375771 3498 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
APPP05067 LAMP2-203ENST00000434600 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
APPP05067 XRRA1-207ENST00000527087 2505 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
APPP05067 USP47-202ENST00000339865 7775 ntTSL 2 BASIC16.26■□□□□ 0.19
APPP05067 BAHCC1-201ENST00000307745 10342 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
APPP05067 AC012349.1-201ENST00000518662 2643 ntTSL 2 BASIC16.26■□□□□ 0.19
APPP05067 BTNL8-203ENST00000400707 1512 ntTSL 2 BASIC16.26■□□□□ 0.19
APPP05067 AC007336.3-201ENST00000623886 2160 ntBASIC16.26■□□□□ 0.19
APPP05067 MSNP1-201ENST00000511640 1732 ntBASIC16.26■□□□□ 0.19
APPP05067 FAM212B-201ENST00000357260 5980 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
APPP05067 MCM2-201ENST00000265056 3622 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
APPP05067 CUTA-203ENST00000374500 937 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
APPP05067 SNORD23-201ENST00000408876 110 ntBASIC16.26■□□□□ 0.19
APPP05067 TPRKB-203ENST00000409716 816 ntTSL 5 BASIC16.26■□□□□ 0.19
APPP05067 FAM21EP-201ENST00000417804 985 ntBASIC16.26■□□□□ 0.19
APPP05067 AP001628.2-201ENST00000420273 784 ntTSL 2 BASIC16.26■□□□□ 0.19
APPP05067 RPL37A-203ENST00000427280 698 ntTSL 5 BASIC16.26■□□□□ 0.19
APPP05067 SOX2-OT-209ENST00000485035 561 ntTSL 4 BASIC16.26■□□□□ 0.19
APPP05067 AL359219.1-201ENST00000556311 934 ntBASIC16.26■□□□□ 0.19
APPP05067 SOX2-OT-222ENST00000595084 853 ntTSL 5 BASIC16.26■□□□□ 0.19
APPP05067 RPL37A-211ENST00000598925 775 ntTSL 5 BASIC16.26■□□□□ 0.19
APPP05067 SOX2-OT-232ENST00000600386 792 ntTSL 5 BASIC16.26■□□□□ 0.19
APPP05067 LINC00116-203ENST00000611969 441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
APPP05067 AC026120.2-201ENST00000617239 309 ntBASIC16.26■□□□□ 0.19
APPP05067 MKRN2-203ENST00000448482 1679 ntTSL 5 BASIC16.26■□□□□ 0.19
APPP05067 LIX1L-201ENST00000604000 3975 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
APPP05067 ADAM17-203ENST00000497134 1873 ntTSL 5 BASIC16.26■□□□□ 0.19
APPP05067 ZSCAN5B-202ENST00000586855 2059 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
APPP05067 ZNF747-202ENST00000395094 3504 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
APPP05067 CUL4A-204ENST00000451881 3724 ntTSL 5 BASIC16.26■□□□□ 0.19
APPP05067 SCOC-210ENST00000608372 5129 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
APPP05067 TOE1-201ENST00000372090 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
APPP05067 AGAP5-201ENST00000374094 2394 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
APPP05067 ZDHHC6-202ENST00000369405 2170 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
APPP05067 CRISPLD2-209ENST00000567845 2178 ntAPPRIS ALT1 TSL 5 BASIC16.26■□□□□ 0.19
APPP05067 GPN1-211ENST00000610189 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
APPP05067 AC092117.1-201ENST00000621230 3250 ntBASIC16.25■□□□□ 0.19
APPP05067 LDLRAD4-203ENST00000399848 8633 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
APPP05067 NRP2-204ENST00000360409 6662 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
APPP05067 LGALS4-201ENST00000307751 1535 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
APPP05067 FES-201ENST00000328850 2829 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
APPP05067 ZBTB20-215ENST00000481632 2800 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
APPP05067 PRKD1-201ENST00000331968 3726 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
APPP05067 DSN1-203ENST00000373750 2233 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
APPP05067 CCNE2-205ENST00000520509 3330 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
APPP05067 CACNA1G-214ENST00000505165 6633 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
APPP05067 CACNA1G-220ENST00000507896 6600 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
APPP05067 GALP-201ENST00000357330 938 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
APPP05067 TRBV4-1-201ENST00000390357 373 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
APPP05067 TRBV4-2-201ENST00000390392 455 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
APPP05067 LINC01868-201ENST00000414965 562 ntTSL 4 BASIC16.25■□□□□ 0.19
APPP05067 GALP-202ENST00000440823 889 ntTSL 5 BASIC16.25■□□□□ 0.19
APPP05067 AL662797.1-201ENST00000442852 799 ntTSL 3 BASIC16.25■□□□□ 0.19
APPP05067 AL512288.1-201ENST00000448015 491 ntTSL 5 BASIC16.25■□□□□ 0.19
APPP05067 C21orf62-204ENST00000490358 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
APPP05067 ROPN1B-203ENST00000505382 713 ntTSL 2 BASIC16.25■□□□□ 0.19
APPP05067 C8orf31-207ENST00000524181 1199 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
APPP05067 DUXAP9-201ENST00000547220 665 ntTSL 3 BASIC16.25■□□□□ 0.19
APPP05067 FOXN3-AS2-201ENST00000554071 1262 ntBASIC16.25■□□□□ 0.19
APPP05067 MT2A-202ENST00000561491 581 ntTSL 2 BASIC16.25■□□□□ 0.19
APPP05067 NPTN-204ENST00000562924 1094 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
APPP05067 ACSM5-206ENST00000575584 1130 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
APPP05067 AC005777.1-201ENST00000588332 187 ntBASIC16.25■□□□□ 0.19
APPP05067 TMEM205-216ENST00000593256 792 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
APPP05067 RNF103-CHMP3-202ENST00000604011 1135 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
APPP05067 AL136982.5-201ENST00000605222 294 ntBASIC16.25■□□□□ 0.19
APPP05067 AL451007.2-201ENST00000632004 563 ntBASIC16.25■□□□□ 0.19
APPP05067 OVOL3-202ENST00000633214 675 ntAPPRIS P2 TSL 5 BASIC16.25■□□□□ 0.19
APPP05067 SYNPR-209ENST00000478300 2709 ntAPPRIS P4 TSL 1 (best) BASIC16.25■□□□□ 0.19
APPP05067 CLPB-209ENST00000538039 3078 ntAPPRIS ALT1 TSL 2 BASIC16.25■□□□□ 0.19
APPP05067 LSM14A-201ENST00000433627 3424 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
APPP05067 BAHD1-203ENST00000561234 4698 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
APPP05067 RNF183-206ENST00000478815 2312 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
APPP05067 CNTN1-203ENST00000547702 3033 ntTSL 2 BASIC16.25■□□□□ 0.19
APPP05067 ZFYVE19-202ENST00000336455 1784 ntTSL 2 BASIC16.25■□□□□ 0.19
APPP05067 FAM122C-203ENST00000414371 2119 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
APPP05067 TMEM182-201ENST00000409173 3198 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
APPP05067 DAB2IP-202ENST00000309989 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
APPP05067 IL1RL2-201ENST00000264257 2615 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
APPP05067 KIR2DL3-201ENST00000342376 1590 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 73.8 ms