Protein–RNA interactions for Protein: O60939

SCN2B, Sodium channel subunit beta-2, humanhuman

Predictions only

Length 215 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2BO60939 CASP8-212ENST00000432109 1629 ntAPPRIS P4 TSL 5 BASIC12.82□□□□□ -0.36
SCN2BO60939 SEMA3F-201ENST00000002829 3802 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
SCN2BO60939 EIF4EBP3-201ENST00000310331 691 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SCN2BO60939 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
SCN2BO60939 THEG-202ENST00000346878 1211 ntAPPRIS ALT2 TSL 2 BASIC12.82□□□□□ -0.36
SCN2BO60939 MIR1247-201ENST00000408206 136 ntBASIC12.82□□□□□ -0.36
SCN2BO60939 RHBDD2-203ENST00000428119 1274 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
SCN2BO60939 AC016723.1-201ENST00000430546 633 ntTSL 3 BASIC12.82□□□□□ -0.36
SCN2BO60939 AP000358.1-201ENST00000456260 156 ntBASIC12.82□□□□□ -0.36
SCN2BO60939 AC012618.1-201ENST00000461223 412 ntBASIC12.82□□□□□ -0.36
SCN2BO60939 KRT8P13-201ENST00000463294 1010 ntBASIC12.82□□□□□ -0.36
SCN2BO60939 PIGCP1-201ENST00000527583 895 ntBASIC12.82□□□□□ -0.36
SCN2BO60939 TMEM106A-201ENST00000536052 1181 ntTSL 2 BASIC12.82□□□□□ -0.36
SCN2BO60939 TNNI1-205ENST00000555948 580 ntTSL 5 BASIC12.82□□□□□ -0.36
SCN2BO60939 TXNDC17-208ENST00000574838 746 ntTSL 3 BASIC12.82□□□□□ -0.36
SCN2BO60939 NDUFB5-216ENST00000611971 951 ntTSL 2 BASIC12.82□□□□□ -0.36
SCN2BO60939 AF254983.2-201ENST00000612331 135 ntBASIC12.82□□□□□ -0.36
SCN2BO60939 ROPN1-211ENST00000620893 1006 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SCN2BO60939 CDK7-214ENST00000626796 358 ntTSL 5 BASIC12.82□□□□□ -0.36
SCN2BO60939 CDK7-215ENST00000629350 1149 ntTSL 5 BASIC12.82□□□□□ -0.36
SCN2BO60939 AAAS-201ENST00000209873 1840 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SCN2BO60939 TXNDC12-201ENST00000371626 2396 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SCN2BO60939 ARHGEF9-203ENST00000374872 2364 ntTSL 2 BASIC12.82□□□□□ -0.36
SCN2BO60939 FBXL18-201ENST00000382368 3498 ntAPPRIS P2 TSL 5 BASIC12.82□□□□□ -0.36
SCN2BO60939 STRIP2-201ENST00000249344 5115 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SCN2BO60939 LAMA3-202ENST00000313654 10661 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
SCN2BO60939 NRDC-202ENST00000354831 3895 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
SCN2BO60939 RAB3D-201ENST00000222120 4273 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SCN2BO60939 CAMKK2-205ENST00000392474 4453 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
SCN2BO60939 LINC01209-201ENST00000451289 2400 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
SCN2BO60939 SLC28A1-201ENST00000286749 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SCN2BO60939 C1QTNF1-204ENST00000392445 2833 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
SCN2BO60939 ANKRA2-201ENST00000296785 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SCN2BO60939 NGLY1-205ENST00000417874 2062 ntTSL 2 BASIC12.82□□□□□ -0.36
SCN2BO60939 AC139491.6-202ENST00000637171 2077 ntBASIC12.82□□□□□ -0.36
SCN2BO60939 ZNF581-203ENST00000587252 1324 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
SCN2BO60939 RASA4-203ENST00000461209 3244 ntTSL 2 BASIC12.82□□□□□ -0.36
SCN2BO60939 AC016245.1-201ENST00000570335 3204 ntTSL 2 BASIC12.82□□□□□ -0.36
SCN2BO60939 FURIN-206ENST00000610579 4191 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
SCN2BO60939 AC091807.1-201ENST00000418838 1544 ntBASIC12.82□□□□□ -0.36
SCN2BO60939 GBAP1-208ENST00000566701 1546 ntBASIC12.82□□□□□ -0.36
SCN2BO60939 YY1AP1-205ENST00000355499 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
SCN2BO60939 ZBTB42-201ENST00000342537 3800 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
SCN2BO60939 IGFN1-201ENST00000295591 4439 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
SCN2BO60939 DTX1-201ENST00000257600 3455 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SCN2BO60939 RHBDL2-201ENST00000289248 2129 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
SCN2BO60939 YLPM1-207ENST00000552421 4899 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
SCN2BO60939 ZNF689-201ENST00000287461 3547 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SCN2BO60939 RABGEF1-210ENST00000437078 4319 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
SCN2BO60939 PRR3-201ENST00000376557 1797 ntTSL 2 BASIC12.81□□□□□ -0.36
SCN2BO60939 RALGPS1-201ENST00000259351 6336 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SCN2BO60939 ZFAND3-201ENST00000287218 3366 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SCN2BO60939 ATG7-201ENST00000354449 4959 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SCN2BO60939 UQCRB-201ENST00000287022 5575 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SCN2BO60939 POLD1-201ENST00000440232 3444 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SCN2BO60939 CHIAP2-201ENST00000369743 2829 ntTSL 5 BASIC12.81□□□□□ -0.36
SCN2BO60939 KIAA1958-202ENST00000374244 2643 ntAPPRIS ALT1 TSL 5 BASIC12.81□□□□□ -0.36
SCN2BO60939 AC117503.4-201ENST00000623229 1418 ntBASIC12.81□□□□□ -0.36
SCN2BO60939 ZBED8-201ENST00000408953 2851 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
SCN2BO60939 STOX2-201ENST00000308497 10458 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SCN2BO60939 KCNIP2-203ENST00000348850 2089 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
SCN2BO60939 CAMKV-209ENST00000477224 3314 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SCN2BO60939 TRMT10B-203ENST00000377754 1881 ntTSL 2 BASIC12.81□□□□□ -0.36
SCN2BO60939 ARL8B-202ENST00000419534 1684 ntTSL 2 BASIC12.81□□□□□ -0.36
SCN2BO60939 MARCH9-202ENST00000548358 1668 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
SCN2BO60939 HMGB1-202ENST00000339872 2319 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
SCN2BO60939 MAL-204ENST00000354078 831 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
SCN2BO60939 LEMD1-205ENST00000367154 786 ntTSL 2 BASIC12.81□□□□□ -0.36
SCN2BO60939 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
SCN2BO60939 AL583805.1-201ENST00000391389 531 ntBASIC12.81□□□□□ -0.36
SCN2BO60939 KRTAP2-2-201ENST00000398477 733 ntAPPRIS P2 BASIC12.81□□□□□ -0.36
SCN2BO60939 REEP1-202ENST00000453231 940 ntTSL 2 BASIC12.81□□□□□ -0.36
SCN2BO60939 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SCN2BO60939 AC108462.1-201ENST00000457467 850 ntTSL 3 BASIC12.81□□□□□ -0.36
SCN2BO60939 FAM3D-AS1-201ENST00000464125 821 ntTSL 3 BASIC12.81□□□□□ -0.36
SCN2BO60939 RN7SL67P-201ENST00000492147 296 ntBASIC12.81□□□□□ -0.36
SCN2BO60939 AP003419.2-201ENST00000543494 711 ntAPPRIS P1 TSL 3 BASIC12.81□□□□□ -0.36
SCN2BO60939 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC12.81□□□□□ -0.36
SCN2BO60939 AC107871.2-202ENST00000563057 396 ntTSL 2 BASIC12.81□□□□□ -0.36
SCN2BO60939 AP005264.5-201ENST00000590066 467 ntBASIC12.81□□□□□ -0.36
SCN2BO60939 AC005779.2-201ENST00000593083 550 ntAPPRIS P1 TSL 4 BASIC12.81□□□□□ -0.36
SCN2BO60939 AC020922.3-201ENST00000595064 547 ntBASIC12.81□□□□□ -0.36
SCN2BO60939 NEAT1-203ENST00000601801 487 ntTSL 4 BASIC12.81□□□□□ -0.36
SCN2BO60939 STAG3L1-204ENST00000619870 1192 ntTSL 2 BASIC12.81□□□□□ -0.36
SCN2BO60939 ITPRIP-201ENST00000278071 6807 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SCN2BO60939 PDE2A-218ENST00000540345 3027 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
SCN2BO60939 CUL2-210ENST00000626172 4115 ntTSL 5 BASIC12.81□□□□□ -0.36
SCN2BO60939 BCL2L1-201ENST00000307677 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SCN2BO60939 FBLN2-207ENST00000492059 4193 ntAPPRIS P4 TSL 2 BASIC12.81□□□□□ -0.36
SCN2BO60939 GREB1-206ENST00000396123 5296 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
SCN2BO60939 AGAP5-202ENST00000443782 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
SCN2BO60939 LNP1-201ENST00000383693 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SCN2BO60939 EIF4G1-205ENST00000382330 5129 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
SCN2BO60939 FAM90A26-201ENST00000512047 2492 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
SCN2BO60939 CDH4-203ENST00000614565 6513 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SCN2BO60939 USO1-201ENST00000264904 4135 ntTSL 2 BASIC12.81□□□□□ -0.36
SCN2BO60939 NTSR1-201ENST00000370501 4132 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SCN2BO60939 SLC35F1-201ENST00000360388 4852 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
SCN2BO60939 SPECC1-206ENST00000395530 8133 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
SCN2BO60939 MLX-202ENST00000346833 2334 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms