Protein–RNA interactions for Protein: O00533

CHL1, Neural cell adhesion molecule L1-like protein, humanhuman

Predictions only

Length 1,208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHL1O00533 AL365436.2-201ENST00000434112 526 ntTSL 4 BASIC17.07■□□□□ 0.32
CHL1O00533 AC027612.2-202ENST00000445955 1199 ntBASIC17.07■□□□□ 0.32
CHL1O00533 APCDD1L-AS1-206ENST00000445984 566 ntTSL 3 BASIC17.07■□□□□ 0.32
CHL1O00533 AL137078.1-201ENST00000446280 404 ntTSL 2 BASIC17.07■□□□□ 0.32
CHL1O00533 APCDD1L-AS1-208ENST00000448374 546 ntTSL 4 BASIC17.07■□□□□ 0.32
CHL1O00533 AC010136.1-201ENST00000450996 568 ntTSL 4 BASIC17.07■□□□□ 0.32
CHL1O00533 GOLGA2P10-201ENST00000550961 817 ntBASIC17.07■□□□□ 0.32
CHL1O00533 BMF-206ENST00000558774 671 ntTSL 3 BASIC17.07■□□□□ 0.32
CHL1O00533 MT1G-203ENST00000568675 628 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CHL1O00533 AC093503.1-201ENST00000593888 495 ntTSL 3 BASIC17.07■□□□□ 0.32
CHL1O00533 AC018766.1-201ENST00000601211 484 ntTSL 3 BASIC17.07■□□□□ 0.32
CHL1O00533 CYB5D1-203ENST00000571846 1870 ntTSL 5 BASIC17.07■□□□□ 0.32
CHL1O00533 RRAGD-201ENST00000359203 4042 ntTSL 2 BASIC17.07■□□□□ 0.32
CHL1O00533 AC004147.4-201ENST00000636421 1844 ntTSL 5 BASIC17.07■□□□□ 0.32
CHL1O00533 ZFP37-203ENST00000555206 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
CHL1O00533 C19orf57-204ENST00000586783 2454 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
CHL1O00533 PBXIP1-203ENST00000368465 3144 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
CHL1O00533 OR2A25-203ENST00000641663 1741 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
CHL1O00533 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CHL1O00533 CXorf40B-203ENST00000370406 1653 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
CHL1O00533 CNOT4-204ENST00000414802 1687 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CHL1O00533 SLC26A6-202ENST00000337000 2317 ntTSL 2 BASIC17.07■□□□□ 0.32
CHL1O00533 UBE2W-201ENST00000419880 2315 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CHL1O00533 USP36-202ENST00000449938 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
CHL1O00533 DRD3-204ENST00000467632 1554 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
CHL1O00533 DBN1-203ENST00000393565 2701 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
CHL1O00533 FER1L4-204ENST00000430275 3281 ntTSL 5 BASIC17.06■□□□□ 0.32
CHL1O00533 GNB5-203ENST00000396335 2678 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CHL1O00533 MIPEPP1-201ENST00000413533 2027 ntBASIC17.06■□□□□ 0.32
CHL1O00533 VRK3-205ENST00000593919 1979 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CHL1O00533 CATSPERE-201ENST00000366531 3038 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
CHL1O00533 DGCR9-201ENST00000609630 2415 ntBASIC17.06■□□□□ 0.32
CHL1O00533 RBM6-211ENST00000443081 4010 ntTSL 5 BASIC17.06■□□□□ 0.32
CHL1O00533 ZSCAN5C-202ENST00000534327 1892 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
CHL1O00533 FAM157C-201ENST00000563357 1806 ntTSL 2 BASIC17.06■□□□□ 0.32
CHL1O00533 MYL7-201ENST00000223364 612 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CHL1O00533 MRPL27-201ENST00000225969 716 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CHL1O00533 RANGRF-201ENST00000226105 1009 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CHL1O00533 HIST1H2AE-201ENST00000303910 509 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
CHL1O00533 MRPS11-202ENST00000353598 766 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CHL1O00533 AL157823.1-201ENST00000403727 628 ntBASIC17.06■□□□□ 0.32
CHL1O00533 GNAT1-202ENST00000433068 1224 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
CHL1O00533 RPSAP16-201ENST00000447583 821 ntBASIC17.06■□□□□ 0.32
CHL1O00533 AC015795.2-201ENST00000512720 575 ntTSL 3 BASIC17.06■□□□□ 0.32
CHL1O00533 CCDC42-202ENST00000539522 1087 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CHL1O00533 AC009119.2-201ENST00000561562 723 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
CHL1O00533 AC007610.1-201ENST00000568130 498 ntTSL 3 BASIC17.06■□□□□ 0.32
CHL1O00533 HNRNPA1P16-201ENST00000575692 955 ntBASIC17.06■□□□□ 0.32
CHL1O00533 MIR4687-201ENST00000583618 80 ntBASIC17.06■□□□□ 0.32
CHL1O00533 APOBEC3A-205ENST00000618553 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CHL1O00533 DNAJC14-202ENST00000317287 2774 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
CHL1O00533 AGGF1P10-201ENST00000635005 2191 ntBASIC17.06■□□□□ 0.32
CHL1O00533 HACD3-207ENST00000566074 1658 ntTSL 5 BASIC17.06■□□□□ 0.32
CHL1O00533 CTCFL-205ENST00000423479 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
CHL1O00533 PPP1R8-201ENST00000236412 2414 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CHL1O00533 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CHL1O00533 PLAGL1-201ENST00000354765 3663 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CHL1O00533 ZNF641-201ENST00000301042 4544 ntTSL 5 BASIC17.06■□□□□ 0.32
CHL1O00533 ZNF774-201ENST00000354377 3202 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CHL1O00533 FBXL16-201ENST00000324361 3411 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CHL1O00533 MIF4GD-201ENST00000245551 1358 ntTSL 3 BASIC17.05■□□□□ 0.32
CHL1O00533 ECI2-201ENST00000361538 1380 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CHL1O00533 TP63-206ENST00000392463 1386 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CHL1O00533 NTN4-201ENST00000343702 3615 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CHL1O00533 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC17.05■□□□□ 0.32
CHL1O00533 DRD2-208ENST00000542968 2467 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
CHL1O00533 TRIB2-201ENST00000155926 4391 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CHL1O00533 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CHL1O00533 PITPNB-201ENST00000320996 2826 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CHL1O00533 MAP3K21-202ENST00000366623 3910 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
CHL1O00533 CENPL-202ENST00000356198 2357 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CHL1O00533 DAD1-201ENST00000250498 731 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CHL1O00533 PRR23A-201ENST00000383163 801 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
CHL1O00533 KRTAP2-3-201ENST00000391418 875 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
CHL1O00533 AC005822.1-201ENST00000414124 1034 ntBASIC17.05■□□□□ 0.32
CHL1O00533 NR1I3-210ENST00000437437 973 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CHL1O00533 AL669831.4-201ENST00000447500 872 ntTSL 5 BASIC17.05■□□□□ 0.32
CHL1O00533 PPOX-204ENST00000462866 473 ntTSL 5 BASIC17.05■□□□□ 0.32
CHL1O00533 AADAC-202ENST00000488869 719 ntTSL 2 BASIC17.05■□□□□ 0.32
CHL1O00533 KRT18P63-201ENST00000505463 979 ntBASIC17.05■□□□□ 0.32
CHL1O00533 BACE1-207ENST00000510630 1236 ntTSL 2 BASIC17.05■□□□□ 0.32
CHL1O00533 AC105133.1-201ENST00000559749 742 ntTSL 3 BASIC17.05■□□□□ 0.32
CHL1O00533 RPSAP67-201ENST00000584105 862 ntBASIC17.05■□□□□ 0.32
CHL1O00533 AC006986.1-201ENST00000612764 241 ntBASIC17.05■□□□□ 0.32
CHL1O00533 Metazoa_SRP.75-201ENST00000614439 293 ntBASIC17.05■□□□□ 0.32
CHL1O00533 PCDHA2-202ENST00000520672 3056 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CHL1O00533 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CHL1O00533 EBF3-201ENST00000355311 2993 ntAPPRIS ALT1 TSL 5 BASIC17.05■□□□□ 0.32
CHL1O00533 STAT3-202ENST00000389272 2615 ntTSL 2 BASIC17.05■□□□□ 0.32
CHL1O00533 HNRNPH1-203ENST00000393432 2279 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CHL1O00533 SLC6A6P1-201ENST00000413933 1850 ntBASIC17.05■□□□□ 0.32
CHL1O00533 ACAD11-204ENST00000481970 1891 ntTSL 5 BASIC17.05■□□□□ 0.32
CHL1O00533 AC239798.2-201ENST00000415338 3540 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CHL1O00533 TNFAIP8L1-201ENST00000327473 3814 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CHL1O00533 TNFAIP8L1-202ENST00000536716 3845 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
CHL1O00533 ZNF582-201ENST00000301310 2824 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CHL1O00533 ZNF596-201ENST00000308811 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CHL1O00533 TNK1-207ENST00000576812 3023 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CHL1O00533 MAP7D2-201ENST00000379643 3918 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
CHL1O00533 TMEM74B-201ENST00000381894 1730 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 51.1 ms