Protein–RNA interactions for Protein: Q9UNL2

SSR3, Translocon-associated protein subunit gamma, humanhuman

Predictions only

Length 185 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3Q9UNL2 UBP1-204ENST00000447368 3669 ntAPPRIS ALT1 TSL 2 BASIC12.09□□□□□ -0.47
SSR3Q9UNL2 FLNA-202ENST00000360319 8281 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
SSR3Q9UNL2 TBC1D26-201ENST00000437605 1868 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
SSR3Q9UNL2 GOLGA8T-202ENST00000569052 1896 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
SSR3Q9UNL2 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
SSR3Q9UNL2 THSD1-201ENST00000258613 2962 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
SSR3Q9UNL2 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
SSR3Q9UNL2 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC12.09□□□□□ -0.47
SSR3Q9UNL2 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC12.09□□□□□ -0.47
SSR3Q9UNL2 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC12.09□□□□□ -0.47
SSR3Q9UNL2 LINC00686-201ENST00000435412 332 ntTSL 3 BASIC12.09□□□□□ -0.47
SSR3Q9UNL2 ALKBH2-203ENST00000440112 574 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
SSR3Q9UNL2 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC12.09□□□□□ -0.47
SSR3Q9UNL2 TSPY16P-201ENST00000449843 468 ntBASIC12.09□□□□□ -0.47
SSR3Q9UNL2 BX284668.4-201ENST00000453917 508 ntBASIC12.09□□□□□ -0.47
SSR3Q9UNL2 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
SSR3Q9UNL2 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
SSR3Q9UNL2 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
SSR3Q9UNL2 MYOZ3-205ENST00000520112 605 ntTSL 4 BASIC12.09□□□□□ -0.47
SSR3Q9UNL2 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC12.09□□□□□ -0.47
SSR3Q9UNL2 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
SSR3Q9UNL2 NME1-NME2-203ENST00000555572 1193 ntAPPRIS ALT2 TSL 2 BASIC12.09□□□□□ -0.47
SSR3Q9UNL2 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC12.09□□□□□ -0.47
SSR3Q9UNL2 RN7SL455P-201ENST00000580629 282 ntBASIC12.09□□□□□ -0.47
SSR3Q9UNL2 PIGL-212ENST00000581006 554 ntTSL 4 BASIC12.09□□□□□ -0.47
SSR3Q9UNL2 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
SSR3Q9UNL2 TXNRD1-201ENST00000354940 4082 ntAPPRIS ALT1 TSL 5 BASIC12.09□□□□□ -0.47
SSR3Q9UNL2 BAG6-247ENST00000439687 3104 ntTSL 2 BASIC12.09□□□□□ -0.47
SSR3Q9UNL2 ZNF25-201ENST00000302609 4139 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
SSR3Q9UNL2 ARHGEF2-203ENST00000361247 4149 ntAPPRIS P4 TSL 1 (best) BASIC12.09□□□□□ -0.47
SSR3Q9UNL2 SMG6-201ENST00000263073 5960 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
SSR3Q9UNL2 AC145098.2-201ENST00000623593 3026 ntBASIC12.09□□□□□ -0.47
SSR3Q9UNL2 LIMS2-209ENST00000410038 1695 ntTSL 2 BASIC12.09□□□□□ -0.47
SSR3Q9UNL2 ODF2L-204ENST00000370566 2155 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
SSR3Q9UNL2 SLC22A6-202ENST00000377871 2151 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
SSR3Q9UNL2 ACSL6-207ENST00000379264 6539 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
SSR3Q9UNL2 AC120114.4-201ENST00000623731 2194 ntBASIC12.09□□□□□ -0.47
SSR3Q9UNL2 REPS1-205ENST00000415951 2424 ntTSL 5 BASIC12.09□□□□□ -0.47
SSR3Q9UNL2 TMEM86A-201ENST00000280734 3595 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
SSR3Q9UNL2 MKL1-212ENST00000618417 1842 ntTSL 5 BASIC12.09□□□□□ -0.47
SSR3Q9UNL2 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
SSR3Q9UNL2 TRIM32-203ENST00000450136 3717 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
SSR3Q9UNL2 DDO-201ENST00000368923 1953 ntTSL 2 BASIC12.09□□□□□ -0.47
SSR3Q9UNL2 BBOF1-201ENST00000394009 3106 ntAPPRIS P2 TSL 2 BASIC12.09□□□□□ -0.47
SSR3Q9UNL2 AC018629.1-201ENST00000623381 1736 ntBASIC12.08□□□□□ -0.47
SSR3Q9UNL2 PCDHB7-201ENST00000231137 3765 ntAPPRIS P1 BASIC12.08□□□□□ -0.47
SSR3Q9UNL2 CACNB3-204ENST00000547230 2395 ntTSL 3 BASIC12.08□□□□□ -0.47
SSR3Q9UNL2 DNASE1L1-205ENST00000369809 3008 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.47
SSR3Q9UNL2 NUP85-201ENST00000245544 2121 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
SSR3Q9UNL2 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
SSR3Q9UNL2 PBOV1-201ENST00000527246 2506 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
SSR3Q9UNL2 PRIMPOL-201ENST00000314970 2289 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
SSR3Q9UNL2 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
SSR3Q9UNL2 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC12.08□□□□□ -0.48
SSR3Q9UNL2 GGTA1P-205ENST00000495328 3478 ntTSL 2 BASIC12.08□□□□□ -0.48
SSR3Q9UNL2 GZF1-201ENST00000338121 4835 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
SSR3Q9UNL2 CSF3-201ENST00000225474 1509 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
SSR3Q9UNL2 KRIT1-201ENST00000340022 4553 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
SSR3Q9UNL2 TCF21-202ENST00000367882 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
SSR3Q9UNL2 RMND5B-210ENST00000515098 4066 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
SSR3Q9UNL2 DAAM2-208ENST00000538976 6247 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
SSR3Q9UNL2 ZMYND11-203ENST00000381591 4229 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
SSR3Q9UNL2 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC12.08□□□□□ -0.48
SSR3Q9UNL2 C20orf141-201ENST00000380589 730 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
SSR3Q9UNL2 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
SSR3Q9UNL2 TMEM216-202ENST00000398979 908 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
SSR3Q9UNL2 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC12.08□□□□□ -0.48
SSR3Q9UNL2 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
SSR3Q9UNL2 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC12.08□□□□□ -0.48
SSR3Q9UNL2 AL118511.1-201ENST00000439341 794 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
SSR3Q9UNL2 UPK1A-AS1-201ENST00000443196 795 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
SSR3Q9UNL2 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC12.08□□□□□ -0.48
SSR3Q9UNL2 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
SSR3Q9UNL2 AC078819.1-201ENST00000547454 765 ntBASIC12.08□□□□□ -0.48
SSR3Q9UNL2 AC012085.1-201ENST00000548270 765 ntBASIC12.08□□□□□ -0.48
SSR3Q9UNL2 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
SSR3Q9UNL2 AL160314.3-201ENST00000556041 767 ntBASIC12.08□□□□□ -0.48
SSR3Q9UNL2 RPL28-206ENST00000558752 671 ntTSL 3 BASIC12.08□□□□□ -0.48
SSR3Q9UNL2 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC12.08□□□□□ -0.48
SSR3Q9UNL2 AC100827.2-201ENST00000563214 1194 ntBASIC12.08□□□□□ -0.48
SSR3Q9UNL2 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC12.08□□□□□ -0.48
SSR3Q9UNL2 AC004233.3-201ENST00000607794 1269 ntBASIC12.08□□□□□ -0.48
SSR3Q9UNL2 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
SSR3Q9UNL2 RBMXL3-201ENST00000424776 3442 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
SSR3Q9UNL2 FSCN3-201ENST00000265825 2238 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
SSR3Q9UNL2 MAN2B1-201ENST00000221363 3170 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
SSR3Q9UNL2 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
SSR3Q9UNL2 SUCLG2-201ENST00000307227 2352 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
SSR3Q9UNL2 TNKS-213ENST00000522110 2900 ntBASIC12.08□□□□□ -0.48
SSR3Q9UNL2 CHMP5-202ENST00000419016 1957 ntTSL 2 BASIC12.08□□□□□ -0.48
SSR3Q9UNL2 FOXD2-AS1-201ENST00000445551 2509 ntBASIC12.08□□□□□ -0.48
SSR3Q9UNL2 NFIX-201ENST00000358552 1727 ntTSL 5 BASIC12.08□□□□□ -0.48
SSR3Q9UNL2 AC087164.2-201ENST00000624514 3130 ntBASIC12.08□□□□□ -0.48
SSR3Q9UNL2 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC12.08□□□□□ -0.48
SSR3Q9UNL2 FANCC-210ENST00000490972 2709 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
SSR3Q9UNL2 LPP-AS2-201ENST00000605573 2852 ntBASIC12.08□□□□□ -0.48
SSR3Q9UNL2 ALPL-203ENST00000374832 2193 ntAPPRIS P3 TSL 2 BASIC12.08□□□□□ -0.48
SSR3Q9UNL2 CYP4B1-202ENST00000371919 1494 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
SSR3Q9UNL2 TIAM1-206ENST00000541036 7018 ntTSL 5 BASIC12.07□□□□□ -0.48
SSR3Q9UNL2 PCDHGB2-201ENST00000522605 4602 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms