Protein–RNA interactions for Protein: Q92572

AP3S1, AP-3 complex subunit sigma-1, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1Q92572 XAB2-201ENST00000358368 2667 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
AP3S1Q92572 ZNF595-203ENST00000608255 1999 ntTSL 2 BASIC11.93□□□□□ -0.5
AP3S1Q92572 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
AP3S1Q92572 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
AP3S1Q92572 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC11.93□□□□□ -0.5
AP3S1Q92572 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
AP3S1Q92572 C20orf141-201ENST00000380589 730 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
AP3S1Q92572 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC11.93□□□□□ -0.5
AP3S1Q92572 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC11.93□□□□□ -0.5
AP3S1Q92572 HNRNPA1P40-201ENST00000426371 1278 ntBASIC11.93□□□□□ -0.5
AP3S1Q92572 RGS5-214ENST00000429865 754 ntTSL 3 BASIC11.93□□□□□ -0.5
AP3S1Q92572 C2orf27AP3-201ENST00000434123 579 ntBASIC11.93□□□□□ -0.5
AP3S1Q92572 HVCN1-203ENST00000439744 1215 ntTSL 2 BASIC11.93□□□□□ -0.5
AP3S1Q92572 OR2R1P-201ENST00000441404 914 ntBASIC11.93□□□□□ -0.5
AP3S1Q92572 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC11.93□□□□□ -0.5
AP3S1Q92572 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC11.93□□□□□ -0.5
AP3S1Q92572 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC11.93□□□□□ -0.5
AP3S1Q92572 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC11.93□□□□□ -0.5
AP3S1Q92572 AC026369.2-201ENST00000540136 1101 ntTSL 3 BASIC11.93□□□□□ -0.5
AP3S1Q92572 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC11.93□□□□□ -0.5
AP3S1Q92572 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC11.93□□□□□ -0.5
AP3S1Q92572 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
AP3S1Q92572 AL354718.3-201ENST00000616414 581 ntBASIC11.93□□□□□ -0.5
AP3S1Q92572 CR382287.1-201ENST00000623954 586 ntBASIC11.93□□□□□ -0.5
AP3S1Q92572 ZNF621-204ENST00000431278 2613 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
AP3S1Q92572 TMEM132D-201ENST00000389441 5305 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
AP3S1Q92572 TBC1D13-202ENST00000372648 3906 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
AP3S1Q92572 CHMP2B-201ENST00000263780 2557 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
AP3S1Q92572 AC008132.1-203ENST00000412938 5920 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
AP3S1Q92572 SH2D2A-203ENST00000392306 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
AP3S1Q92572 LINC00963-203ENST00000423918 1654 ntTSL 2 BASIC11.93□□□□□ -0.5
AP3S1Q92572 AC144522.1-201ENST00000625111 1658 ntBASIC11.93□□□□□ -0.5
AP3S1Q92572 TNIP1-201ENST00000315050 2785 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
AP3S1Q92572 AC012313.8-201ENST00000595059 5402 ntBASIC11.93□□□□□ -0.5
AP3S1Q92572 RBMXL3-201ENST00000424776 3442 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
AP3S1Q92572 BIVM-ERCC5-204ENST00000639132 5195 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
AP3S1Q92572 PTGR2-204ENST00000555228 2543 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
AP3S1Q92572 SYTL2-206ENST00000389960 4299 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
AP3S1Q92572 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
AP3S1Q92572 PRIMPOL-201ENST00000314970 2289 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
AP3S1Q92572 KCNIP1-210ENST00000636734 1613 ntTSL 5 BASIC11.93□□□□□ -0.5
AP3S1Q92572 CRISP2-201ENST00000339139 1382 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
AP3S1Q92572 CDK5RAP2-201ENST00000349780 6228 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
AP3S1Q92572 HACD3-201ENST00000261875 3228 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
AP3S1Q92572 ARHGEF4-212ENST00000525839 3828 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
AP3S1Q92572 SHROOM2P1-201ENST00000434773 2384 ntBASIC11.92□□□□□ -0.5
AP3S1Q92572 ZFHX2-202ENST00000419474 9182 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
AP3S1Q92572 ACIN1-222ENST00000557515 2751 ntTSL 5 BASIC11.92□□□□□ -0.5
AP3S1Q92572 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
AP3S1Q92572 COPS7A-201ENST00000229251 1721 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
AP3S1Q92572 TOP3B-202ENST00000398793 3107 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
AP3S1Q92572 DZIP1L-201ENST00000327532 3493 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
AP3S1Q92572 OTUD6B-201ENST00000285420 3298 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
AP3S1Q92572 AIF1L-204ENST00000372300 3284 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
AP3S1Q92572 BTNL8-202ENST00000340184 2071 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
AP3S1Q92572 GOLGA8T-202ENST00000569052 1896 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
AP3S1Q92572 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
AP3S1Q92572 MRPL32-201ENST00000223324 1035 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
AP3S1Q92572 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC11.92□□□□□ -0.5
AP3S1Q92572 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
AP3S1Q92572 TMEM216-202ENST00000398979 908 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
AP3S1Q92572 LBH-203ENST00000404397 543 ntTSL 4 BASIC11.92□□□□□ -0.5
AP3S1Q92572 AC005076.1-201ENST00000433446 769 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
AP3S1Q92572 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC11.92□□□□□ -0.5
AP3S1Q92572 AC011742.3-201ENST00000439053 820 ntBASIC11.92□□□□□ -0.5
AP3S1Q92572 AC012441.2-201ENST00000444843 739 ntBASIC11.92□□□□□ -0.5
AP3S1Q92572 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC11.92□□□□□ -0.5
AP3S1Q92572 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC11.92□□□□□ -0.5
AP3S1Q92572 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC11.92□□□□□ -0.5
AP3S1Q92572 AL590640.2-201ENST00000457038 527 ntBASIC11.92□□□□□ -0.5
AP3S1Q92572 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC11.92□□□□□ -0.5
AP3S1Q92572 AL356417.2-202ENST00000608986 532 ntTSL 3 BASIC11.92□□□□□ -0.5
AP3S1Q92572 NPPA-203ENST00000610706 849 ntAPPRIS ALT1 TSL 5 BASIC11.92□□□□□ -0.5
AP3S1Q92572 AL591163.1-201ENST00000641757 987 ntBASIC11.92□□□□□ -0.5
AP3S1Q92572 PAX6-207ENST00000379129 2614 ntAPPRIS P4 TSL 5 BASIC11.92□□□□□ -0.5
AP3S1Q92572 WASHC5-201ENST00000318410 4187 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
AP3S1Q92572 ST3GAL5-204ENST00000393808 2236 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
AP3S1Q92572 MYO7A-201ENST00000409619 7106 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
AP3S1Q92572 SPCS1-206ENST00000619898 4254 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
AP3S1Q92572 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC11.92□□□□□ -0.5
AP3S1Q92572 AKAP8-201ENST00000269701 3670 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
AP3S1Q92572 OTOA-203ENST00000388957 2703 ntAPPRIS ALT2 TSL 2 BASIC11.92□□□□□ -0.5
AP3S1Q92572 PFKM-201ENST00000312352 3078 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
AP3S1Q92572 HMGB1-202ENST00000339872 2319 ntAPPRIS P1 TSL 2 BASIC11.92□□□□□ -0.5
AP3S1Q92572 ERCC2-204ENST00000391945 4153 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
AP3S1Q92572 KRT42P-202ENST00000438131 2895 ntTSL 2 BASIC11.92□□□□□ -0.5
AP3S1Q92572 NUP85-201ENST00000245544 2121 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
AP3S1Q92572 POLR1C-203ENST00000372389 1355 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
AP3S1Q92572 CELF2-AS1-201ENST00000379256 2468 ntTSL 2 BASIC11.92□□□□□ -0.5
AP3S1Q92572 ETNK1-201ENST00000266517 7159 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
AP3S1Q92572 RMND5B-210ENST00000515098 4066 ntAPPRIS P1 TSL 2 BASIC11.91□□□□□ -0.5
AP3S1Q92572 AC139491.6-202ENST00000637171 2077 ntBASIC11.91□□□□□ -0.5
AP3S1Q92572 ZMYND11-203ENST00000381591 4229 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
AP3S1Q92572 AC004471.2-201ENST00000609936 1514 ntTSL 3 BASIC11.91□□□□□ -0.5
AP3S1Q92572 LINC01662-201ENST00000342888 1859 ntTSL 2 BASIC11.91□□□□□ -0.5
AP3S1Q92572 BBOF1-201ENST00000394009 3106 ntAPPRIS P2 TSL 2 BASIC11.91□□□□□ -0.5
AP3S1Q92572 NLRP1-208ENST00000571451 5444 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
AP3S1Q92572 KRT18P28-201ENST00000453838 1332 ntBASIC11.91□□□□□ -0.5
AP3S1Q92572 DNASE1L2-204ENST00000567494 1301 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
AP3S1Q92572 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Retrieved 100 of 98,524 protein–RNA pairs in 53.7 ms