Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 LSS-201ENST00000356396 2995 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
SUMO3P55854 LARP4-201ENST00000293618 6296 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
SUMO3P55854 IFT172-203ENST00000416524 1982 ntTSL 2 BASIC12.2□□□□□ -0.46
SUMO3P55854 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
SUMO3P55854 AP000229.1-201ENST00000608591 1979 ntTSL 4 BASIC12.2□□□□□ -0.46
SUMO3P55854 PRDM15-207ENST00000447207 4928 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
SUMO3P55854 Z83844.1-201ENST00000455236 4904 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
SUMO3P55854 IL1RL2-201ENST00000264257 2615 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
SUMO3P55854 PCDHA6-201ENST00000378126 3267 ntBASIC12.2□□□□□ -0.46
SUMO3P55854 PAG1-201ENST00000220597 10744 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
SUMO3P55854 TRPV6-201ENST00000359396 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
SUMO3P55854 NPR1-202ENST00000368680 4236 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
SUMO3P55854 DDX12P-201ENST00000432996 2947 ntBASIC12.2□□□□□ -0.46
SUMO3P55854 B3GNT4-202ENST00000535274 2938 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
SUMO3P55854 RPS6KA1-213ENST00000526792 2596 ntTSL 5 BASIC12.2□□□□□ -0.46
SUMO3P55854 MUC1-223ENST00000611571 4170 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
SUMO3P55854 UGT3A1-203ENST00000503189 1902 ntTSL 2 BASIC12.2□□□□□ -0.46
SUMO3P55854 RNA5SP491-201ENST00000362936 118 ntBASIC12.2□□□□□ -0.46
SUMO3P55854 EIF4E2-205ENST00000409394 604 ntTSL 3 BASIC12.2□□□□□ -0.46
SUMO3P55854 AC108734.2-201ENST00000420887 1069 ntBASIC12.2□□□□□ -0.46
SUMO3P55854 NSUN5P1-203ENST00000422386 972 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
SUMO3P55854 AP000244.1-201ENST00000424582 201 ntBASIC12.2□□□□□ -0.46
SUMO3P55854 AL109767.1-201ENST00000429450 564 ntTSL 4 BASIC12.2□□□□□ -0.46
SUMO3P55854 FAM138B-202ENST00000446648 1130 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
SUMO3P55854 FAM138C-202ENST00000449442 1126 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
SUMO3P55854 AL357140.1-201ENST00000454104 424 ntTSL 2 BASIC12.2□□□□□ -0.46
SUMO3P55854 ARMCX3-AS1-201ENST00000454228 490 ntTSL 3 BASIC12.2□□□□□ -0.46
SUMO3P55854 MUSTN1-202ENST00000486659 622 ntTSL 2 BASIC12.2□□□□□ -0.46
SUMO3P55854 MYOZ3-205ENST00000520112 605 ntTSL 4 BASIC12.2□□□□□ -0.46
SUMO3P55854 IGHVII-33-1-201ENST00000524010 280 ntBASIC12.2□□□□□ -0.46
SUMO3P55854 TMEM123-208ENST00000532161 743 ntAPPRIS ALT2 TSL 3 BASIC12.2□□□□□ -0.46
SUMO3P55854 C12orf57-204ENST00000540506 551 ntTSL 2 BASIC12.2□□□□□ -0.46
SUMO3P55854 AL139316.1-201ENST00000555643 568 ntTSL 3 BASIC12.2□□□□□ -0.46
SUMO3P55854 RN7SL190P-201ENST00000582519 257 ntBASIC12.2□□□□□ -0.46
SUMO3P55854 AC005154.1-232ENST00000582549 556 ntTSL 5 BASIC12.2□□□□□ -0.46
SUMO3P55854 PLIN5-202ENST00000586133 907 ntTSL 3 BASIC12.2□□□□□ -0.46
SUMO3P55854 SPCS2P2-201ENST00000603270 608 ntBASIC12.2□□□□□ -0.46
SUMO3P55854 Metazoa_SRP.83-201ENST00000611762 320 ntBASIC12.2□□□□□ -0.46
SUMO3P55854 RN7SL736P-201ENST00000613111 269 ntBASIC12.2□□□□□ -0.46
SUMO3P55854 WT1-AS_6.1-201ENST00000614919 121 ntBASIC12.2□□□□□ -0.46
SUMO3P55854 BLACE-202ENST00000616210 540 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
SUMO3P55854 Metazoa_SRP.37-201ENST00000617743 320 ntBASIC12.2□□□□□ -0.46
SUMO3P55854 AC073869.4-201ENST00000620841 800 ntBASIC12.2□□□□□ -0.46
SUMO3P55854 FAM138F-201ENST00000631376 1183 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
SUMO3P55854 SNCAIP-206ENST00000414317 1591 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
SUMO3P55854 KRT18P40-201ENST00000599859 1571 ntBASIC12.2□□□□□ -0.46
SUMO3P55854 AL450468.2-201ENST00000565955 1889 ntBASIC12.2□□□□□ -0.46
SUMO3P55854 CYB5D1-203ENST00000571846 1870 ntTSL 5 BASIC12.2□□□□□ -0.46
SUMO3P55854 TRIM69-206ENST00000559390 2486 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
SUMO3P55854 C19orf57-204ENST00000586783 2454 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
SUMO3P55854 SFXN3-201ENST00000224807 3089 ntTSL 5 BASIC12.2□□□□□ -0.46
SUMO3P55854 POTEB3-201ENST00000611217 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
SUMO3P55854 KLC2-206ENST00000417856 3015 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
SUMO3P55854 GALNT3-201ENST00000392701 3868 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
SUMO3P55854 PDXDC1-218ENST00000627450 2683 ntTSL 2 BASIC12.2□□□□□ -0.46
SUMO3P55854 SDR16C5-202ENST00000396721 2399 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
SUMO3P55854 NRXN1-207ENST00000404971 7578 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
SUMO3P55854 CHRNA2-201ENST00000240132 1735 ntAPPRIS ALT2 TSL 2 BASIC12.2□□□□□ -0.46
SUMO3P55854 UBE2V1-222ENST00000557021 2258 ntTSL 5 BASIC12.2□□□□□ -0.46
SUMO3P55854 C2-209ENST00000452323 1999 ntTSL 2 BASIC12.19□□□□□ -0.46
SUMO3P55854 AL356130.1-201ENST00000620188 1965 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
SUMO3P55854 DDX11L1-202ENST00000456328 1657 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
SUMO3P55854 DDX11L10-202ENST00000513886 1652 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
SUMO3P55854 DDX11L9-203ENST00000562189 1652 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
SUMO3P55854 Z98259.1-201ENST00000564261 1697 ntBASIC12.19□□□□□ -0.46
SUMO3P55854 AC125611.4-201ENST00000553259 4166 ntTSL 2 BASIC12.19□□□□□ -0.46
SUMO3P55854 CUL2-210ENST00000626172 4115 ntTSL 5 BASIC12.19□□□□□ -0.46
SUMO3P55854 SPG11-210ENST00000558319 6426 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
SUMO3P55854 SDC1-201ENST00000254351 3147 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
SUMO3P55854 PIK3CG-205ENST00000496166 5197 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
SUMO3P55854 ACYP1-201ENST00000238618 627 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
SUMO3P55854 RPL10L-201ENST00000298283 812 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
SUMO3P55854 GTF3C6-201ENST00000329970 952 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
SUMO3P55854 HFE-203ENST00000336625 804 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
SUMO3P55854 SCGB1C1-201ENST00000342878 431 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
SUMO3P55854 CABP1-203ENST00000351200 770 ntAPPRIS ALT1 TSL 1 (best) BASIC12.19□□□□□ -0.46
SUMO3P55854 BEX2-201ENST00000372674 668 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
SUMO3P55854 ARL16-201ENST00000397498 1227 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
SUMO3P55854 IFI35-203ENST00000415816 1241 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
SUMO3P55854 GRP-202ENST00000420468 579 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
SUMO3P55854 CD37-203ENST00000426897 1204 ntTSL 2 BASIC12.19□□□□□ -0.46
SUMO3P55854 IFI35-204ENST00000438323 1232 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
SUMO3P55854 LAMTOR4-202ENST00000441173 730 ntTSL 2 BASIC12.19□□□□□ -0.46
SUMO3P55854 NALT1-202ENST00000450304 437 ntTSL 3 BASIC12.19□□□□□ -0.46
SUMO3P55854 RAB34-211ENST00000450529 1184 ntTSL 2 BASIC12.19□□□□□ -0.46
SUMO3P55854 AC078785.1-204ENST00000460707 764 ntTSL 3 BASIC12.19□□□□□ -0.46
SUMO3P55854 IGKV1D-43-201ENST00000468879 532 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
SUMO3P55854 LINC00173-201ENST00000470091 435 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
SUMO3P55854 AC108199.1-201ENST00000504249 508 ntTSL 3 BASIC12.19□□□□□ -0.46
SUMO3P55854 AC011383.1-201ENST00000517474 617 ntTSL 3 BASIC12.19□□□□□ -0.46
SUMO3P55854 IGHV3-37-201ENST00000518544 340 ntBASIC12.19□□□□□ -0.46
SUMO3P55854 AC073569.2-201ENST00000551995 354 ntTSL 5 BASIC12.19□□□□□ -0.46
SUMO3P55854 AC051619.5-201ENST00000559003 736 ntTSL 2 BASIC12.19□□□□□ -0.46
SUMO3P55854 DCTPP1-202ENST00000565758 749 ntTSL 3 BASIC12.19□□□□□ -0.46
SUMO3P55854 AP005901.3-201ENST00000581666 415 ntTSL 3 BASIC12.19□□□□□ -0.46
SUMO3P55854 RN7SL555P-201ENST00000584742 339 ntBASIC12.19□□□□□ -0.46
SUMO3P55854 FAAP24-204ENST00000590179 784 ntTSL 2 BASIC12.19□□□□□ -0.46
SUMO3P55854 RPL18A-203ENST00000599870 1084 ntTSL 2 BASIC12.19□□□□□ -0.46
SUMO3P55854 NEAT1-204ENST00000612303 572 ntTSL 3 BASIC12.19□□□□□ -0.46
SUMO3P55854 ARL16-214ENST00000621051 1181 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 80.6 ms