Protein–RNA interactions for Protein: P49662

CASP4, Caspase-4, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4P49662 ELMOD3-201ENST00000315658 2685 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CASP4P49662 GNB5-203ENST00000396335 2678 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CASP4P49662 NCAPG-201ENST00000251496 4661 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CASP4P49662 ITGA6-202ENST00000409080 5306 ntTSL 2 BASIC14.69□□□□□ -0.06
CASP4P49662 C1QTNF6-201ENST00000337843 2934 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CASP4P49662 DPH2-202ENST00000396758 1738 ntTSL 3 BASIC14.69□□□□□ -0.06
CASP4P49662 PLIN4-202ENST00000633942 6484 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
CASP4P49662 SIRPA-203ENST00000400068 4201 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
CASP4P49662 CSTF2-201ENST00000372972 1958 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CASP4P49662 ZNF395-201ENST00000344423 4808 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CASP4P49662 ATG5-202ENST00000360666 2712 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CASP4P49662 RGS22-201ENST00000360863 4296 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
CASP4P49662 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC14.69□□□□□ -0.06
CASP4P49662 TRIM21-201ENST00000254436 1924 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CASP4P49662 TNN-202ENST00000621086 4234 ntTSL 5 BASIC14.69□□□□□ -0.06
CASP4P49662 SECISBP2-201ENST00000339901 3320 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CASP4P49662 MLX-203ENST00000435881 2428 ntAPPRIS ALT1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CASP4P49662 CXCL12-205ENST00000395794 1052 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CASP4P49662 KAZN-204ENST00000400797 1295 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CASP4P49662 LIF-202ENST00000403987 592 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CASP4P49662 LINC01237-201ENST00000415434 573 ntTSL 4 BASIC14.69□□□□□ -0.06
CASP4P49662 TRPM2-AS-201ENST00000423310 586 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CASP4P49662 MPC1L-201ENST00000423387 571 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
CASP4P49662 PTGES3-203ENST00000436399 941 ntTSL 2 BASIC14.69□□□□□ -0.06
CASP4P49662 LINC00211-203ENST00000446799 662 ntTSL 3 BASIC14.69□□□□□ -0.06
CASP4P49662 AC018463.1-201ENST00000456674 917 ntBASIC14.69□□□□□ -0.06
CASP4P49662 PGAP2-224ENST00000490830 810 ntTSL 3 BASIC14.69□□□□□ -0.06
CASP4P49662 AC004889.1-205ENST00000493248 531 ntTSL 4 BASIC14.69□□□□□ -0.06
CASP4P49662 OR2A1-AS1-210ENST00000496968 531 ntBASIC14.69□□□□□ -0.06
CASP4P49662 AC093826.1-201ENST00000508655 993 ntBASIC14.69□□□□□ -0.06
CASP4P49662 C9orf135-205ENST00000527647 748 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CASP4P49662 AP000842.2-201ENST00000533033 517 ntTSL 4 BASIC14.69□□□□□ -0.06
CASP4P49662 DLK1-205ENST00000556051 469 ntTSL 2 BASIC14.69□□□□□ -0.06
CASP4P49662 MIR4649-201ENST00000582839 64 ntBASIC14.69□□□□□ -0.06
CASP4P49662 CROCCP3-204ENST00000590118 574 ntTSL 4 BASIC14.69□□□□□ -0.06
CASP4P49662 SELENOW-212ENST00000601048 888 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CASP4P49662 COX10-AS1-206ENST00000602743 576 ntTSL 5 BASIC14.69□□□□□ -0.06
CASP4P49662 ALDOA-229ENST00000636698 420 ntTSL 3 BASIC14.69□□□□□ -0.06
CASP4P49662 ADM2-202ENST00000395738 4276 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CASP4P49662 MIR22HG-201ENST00000334146 1383 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CASP4P49662 STRAP-202ENST00000419869 1866 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CASP4P49662 SLC1A5-202ENST00000434726 1872 ntTSL 2 BASIC14.69□□□□□ -0.06
CASP4P49662 C8orf49-201ENST00000525043 1968 ntBASIC14.69□□□□□ -0.06
CASP4P49662 ZDHHC6-201ENST00000369404 1721 ntAPPRIS ALT1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CASP4P49662 TMEM2-202ENST00000377044 6523 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
CASP4P49662 HK3-201ENST00000292432 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CASP4P49662 ZSCAN5DP-201ENST00000600684 1488 ntBASIC14.69□□□□□ -0.06
CASP4P49662 KCNJ11-201ENST00000339994 2801 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
CASP4P49662 COL6A2-204ENST00000409416 3430 ntTSL 5 BASIC14.69□□□□□ -0.06
CASP4P49662 CELF4-201ENST00000334919 3542 ntAPPRIS ALT1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CASP4P49662 SATB2-211ENST00000614512 4972 ntTSL 5 BASIC14.68□□□□□ -0.06
CASP4P49662 LINC02226-201ENST00000501071 1587 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CASP4P49662 KRT18P40-201ENST00000599859 1571 ntBASIC14.68□□□□□ -0.06
CASP4P49662 ZNF202-206ENST00000529691 3384 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
CASP4P49662 PLCD4-202ENST00000417849 2738 ntAPPRIS P2 TSL 5 BASIC14.68□□□□□ -0.06
CASP4P49662 CARHSP1-216ENST00000610831 2841 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
CASP4P49662 DNAJC27-207ENST00000534855 4831 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CASP4P49662 COBLL1-225ENST00000629362 3868 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
CASP4P49662 JPT1-202ENST00000356033 1519 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CASP4P49662 PPHLN1-223ENST00000610488 1521 ntTSL 5 BASIC14.68□□□□□ -0.06
CASP4P49662 CSNK1G1-209ENST00000634811 2592 ntAPPRIS ALT1 TSL 5 BASIC14.68□□□□□ -0.06
CASP4P49662 DNMT3B-206ENST00000456297 2315 ntTSL 2 BASIC14.68□□□□□ -0.06
CASP4P49662 MYH14-201ENST00000262269 3848 ntTSL 5 BASIC14.68□□□□□ -0.06
CASP4P49662 CABP1-203ENST00000351200 770 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CASP4P49662 PPA2-204ENST00000354147 667 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CASP4P49662 TMEM219-202ENST00000414689 1024 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CASP4P49662 SSR4P1-201ENST00000415143 412 ntBASIC14.68□□□□□ -0.06
CASP4P49662 LINC01022-201ENST00000415652 394 ntTSL 3 BASIC14.68□□□□□ -0.06
CASP4P49662 LINC00866-201ENST00000427379 418 ntTSL 2 BASIC14.68□□□□□ -0.06
CASP4P49662 PPA2-205ENST00000432483 859 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CASP4P49662 AL365500.1-201ENST00000442783 868 ntTSL 3 BASIC14.68□□□□□ -0.06
CASP4P49662 LYPLA2P1-203ENST00000447689 696 ntBASIC14.68□□□□□ -0.06
CASP4P49662 AL355537.2-201ENST00000453367 375 ntTSL 2 BASIC14.68□□□□□ -0.06
CASP4P49662 TIMM17B-204ENST00000465150 964 ntTSL 2 BASIC14.68□□□□□ -0.06
CASP4P49662 AC009403.1-204ENST00000469539 597 ntTSL 2 BASIC14.68□□□□□ -0.06
CASP4P49662 LINC00173-201ENST00000470091 435 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CASP4P49662 AC104212.2-201ENST00000478813 628 ntBASIC14.68□□□□□ -0.06
CASP4P49662 SOX2-OT-209ENST00000485035 561 ntTSL 4 BASIC14.68□□□□□ -0.06
CASP4P49662 AK2-208ENST00000487289 920 ntTSL 2 BASIC14.68□□□□□ -0.06
CASP4P49662 AC022858.1-202ENST00000521084 393 ntTSL 3 BASIC14.68□□□□□ -0.06
CASP4P49662 AP003398.1-201ENST00000531124 318 ntBASIC14.68□□□□□ -0.06
CASP4P49662 METTL7AP1-201ENST00000547343 496 ntBASIC14.68□□□□□ -0.06
CASP4P49662 AC051619.5-201ENST00000559003 736 ntTSL 2 BASIC14.68□□□□□ -0.06
CASP4P49662 TMEM219-204ENST00000566848 1292 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CASP4P49662 AC020636.2-201ENST00000569170 1189 ntAPPRIS P5 TSL 1 (best) BASIC14.68□□□□□ -0.06
CASP4P49662 ZSCAN10-205ENST00000572548 618 ntTSL 3 BASIC14.68□□□□□ -0.06
CASP4P49662 NAA38-205ENST00000575771 852 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CASP4P49662 SOX2-OT-222ENST00000595084 853 ntTSL 5 BASIC14.68□□□□□ -0.06
CASP4P49662 AC005759.1-202ENST00000599416 415 ntTSL 3 BASIC14.68□□□□□ -0.06
CASP4P49662 SOX2-OT-232ENST00000600386 792 ntTSL 5 BASIC14.68□□□□□ -0.06
CASP4P49662 AL136982.5-201ENST00000605222 294 ntBASIC14.68□□□□□ -0.06
CASP4P49662 MFSD12-215ENST00000615613 688 ntBASIC14.68□□□□□ -0.06
CASP4P49662 CTBP1-AS2-206ENST00000581398 5652 ntBASIC14.68□□□□□ -0.06
CASP4P49662 JMJD6-203ENST00000445478 5303 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CASP4P49662 CICP1-201ENST00000416803 2410 ntBASIC14.68□□□□□ -0.06
CASP4P49662 AC138150.2-201ENST00000589796 2053 ntTSL 2 BASIC14.68□□□□□ -0.06
CASP4P49662 TREH-202ENST00000397925 1718 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CASP4P49662 FUCA1P1-201ENST00000374476 1351 ntBASIC14.68□□□□□ -0.06
CASP4P49662 CDK5RAP1-203ENST00000357886 2164 ntTSL 5 BASIC14.68□□□□□ -0.06
CASP4P49662 AL031432.4-201ENST00000641729 2190 ntBASIC14.68□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 95.7 ms