Protein–RNA interactions for Protein: P42898

MTHFR, Methylenetetrahydrofolate reductase, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFRP42898 TUBB4A-207ENST00000596926 548 ntTSL 4 BASIC14.11□□□□□ -0.15
MTHFRP42898 FXYD3-206ENST00000603524 742 ntTSL 3 BASIC14.11□□□□□ -0.15
MTHFRP42898 FXYD3-211ENST00000604804 564 ntTSL 4 BASIC14.11□□□□□ -0.15
MTHFRP42898 FXYD4-204ENST00000616495 778 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
MTHFRP42898 AP003900.1-201ENST00000622592 859 ntTSL 3 BASIC14.11□□□□□ -0.15
MTHFRP42898 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
MTHFRP42898 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
MTHFRP42898 GALC-206ENST00000544807 2528 ntTSL 2 BASIC14.11□□□□□ -0.15
MTHFRP42898 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
MTHFRP42898 AL513497.1-201ENST00000624273 2083 ntBASIC14.11□□□□□ -0.15
MTHFRP42898 FMO6P-201ENST00000236166 1620 ntBASIC14.11□□□□□ -0.15
MTHFRP42898 APEX1-201ENST00000216714 1484 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
MTHFRP42898 AC020910.6-201ENST00000623084 1459 ntBASIC14.11□□□□□ -0.15
MTHFRP42898 CCDC180-210ENST00000529487 5242 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
MTHFRP42898 HIF3A-202ENST00000244303 2250 ntTSL 2 BASIC14.11□□□□□ -0.15
MTHFRP42898 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
MTHFRP42898 USP33-202ENST00000370792 2917 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
MTHFRP42898 MMAB-210ENST00000545712 4438 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
MTHFRP42898 DTX3L-201ENST00000296161 5868 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
MTHFRP42898 SRP54-202ENST00000546080 2187 ntTSL 2 BASIC14.1□□□□□ -0.15
MTHFRP42898 ELP4-223ENST00000640342 1392 ntTSL 5 BASIC14.1□□□□□ -0.15
MTHFRP42898 KIRREL1-204ENST00000368173 7519 ntTSL 2 BASIC14.1□□□□□ -0.15
MTHFRP42898 ETNPPL-202ENST00000411864 2028 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
MTHFRP42898 OFD1-204ENST00000398395 3307 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
MTHFRP42898 DNAJC27-207ENST00000534855 4831 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
MTHFRP42898 PPT1-213ENST00000641319 2388 ntBASIC14.1□□□□□ -0.15
MTHFRP42898 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
MTHFRP42898 SUGP2-215ENST00000601879 5546 ntAPPRIS P3 TSL 2 BASIC14.1□□□□□ -0.15
MTHFRP42898 AC020915.4-201ENST00000597230 2708 ntTSL 2 BASIC14.1□□□□□ -0.15
MTHFRP42898 G3BP2-202ENST00000359707 4883 ntAPPRIS P4 TSL 1 (best) BASIC14.1□□□□□ -0.15
MTHFRP42898 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
MTHFRP42898 TTLL4-212ENST00000457313 3723 ntTSL 2 BASIC14.1□□□□□ -0.15
MTHFRP42898 KRT8P24-201ENST00000560290 1559 ntBASIC14.1□□□□□ -0.15
MTHFRP42898 DNAJC22-202ENST00000549441 4412 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
MTHFRP42898 DGCR9-201ENST00000609630 2415 ntBASIC14.1□□□□□ -0.15
MTHFRP42898 PRKACB-205ENST00000370688 1905 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
MTHFRP42898 PRSS16-203ENST00000421826 1949 ntTSL 2 BASIC14.1□□□□□ -0.15
MTHFRP42898 PGLYRP2-201ENST00000292609 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
MTHFRP42898 SPAG1-205ENST00000520508 1796 ntTSL 5 BASIC14.1□□□□□ -0.15
MTHFRP42898 COA6-201ENST00000366612 1013 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
MTHFRP42898 PYM1-203ENST00000408946 1226 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
MTHFRP42898 LINC00484-201ENST00000414768 561 ntTSL 5 BASIC14.1□□□□□ -0.15
MTHFRP42898 Z82185.1-201ENST00000417792 549 ntTSL 4 BASIC14.1□□□□□ -0.15
MTHFRP42898 AP001092.1-201ENST00000433606 469 ntTSL 3 BASIC14.1□□□□□ -0.15
MTHFRP42898 AC122694.1-201ENST00000510987 563 ntTSL 4 BASIC14.1□□□□□ -0.15
MTHFRP42898 AP002495.1-205ENST00000529513 655 ntAPPRIS ALT2 TSL 3 BASIC14.1□□□□□ -0.15
MTHFRP42898 MST1L-204ENST00000545160 559 ntTSL 4 BASIC14.1□□□□□ -0.15
MTHFRP42898 HNRNPC-221ENST00000555883 1182 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
MTHFRP42898 AC015922.3-201ENST00000582780 347 ntTSL 3 BASIC14.1□□□□□ -0.15
MTHFRP42898 AC091588.3-201ENST00000583442 770 ntTSL 3 BASIC14.1□□□□□ -0.15
MTHFRP42898 AC011483.3-201ENST00000601506 826 ntTSL 3 BASIC14.1□□□□□ -0.15
MTHFRP42898 ADAMTSL4-AS1-203ENST00000617352 1036 ntTSL 5 BASIC14.1□□□□□ -0.15
MTHFRP42898 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC14.1□□□□□ -0.15
MTHFRP42898 KRT75-201ENST00000252245 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
MTHFRP42898 RCC2P5-201ENST00000492126 1487 ntBASIC14.1□□□□□ -0.15
MTHFRP42898 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
MTHFRP42898 CLEC10A-206ENST00000576617 1800 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
MTHFRP42898 ELN-210ENST00000380584 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
MTHFRP42898 MLXIPL-204ENST00000414749 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
MTHFRP42898 LRRC20-201ENST00000355790 3414 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
MTHFRP42898 MKRN2-203ENST00000448482 1679 ntTSL 5 BASIC14.1□□□□□ -0.15
MTHFRP42898 MCRS1-203ENST00000546244 1686 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
MTHFRP42898 CMTR2-201ENST00000338099 4869 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
MTHFRP42898 AC099521.3-201ENST00000624251 2938 ntBASIC14.1□□□□□ -0.15
MTHFRP42898 TNFAIP8L1-201ENST00000327473 3814 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
MTHFRP42898 TNFAIP8L1-202ENST00000536716 3845 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
MTHFRP42898 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
MTHFRP42898 XRN1-203ENST00000463916 2075 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
MTHFRP42898 PAM-201ENST00000304400 3156 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
MTHFRP42898 PCDH8-201ENST00000338862 3708 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
MTHFRP42898 SSTR1-201ENST00000267377 4295 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
MTHFRP42898 TICRR-202ENST00000560985 6656 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
MTHFRP42898 AC007920.1-201ENST00000356133 2674 ntTSL 2 BASIC14.09□□□□□ -0.15
MTHFRP42898 GNAS-215ENST00000371102 3438 ntTSL 5 BASIC14.09□□□□□ -0.15
MTHFRP42898 SFPQP1-201ENST00000446621 1786 ntBASIC14.09□□□□□ -0.15
MTHFRP42898 GOLGA8EP-201ENST00000530246 1959 ntBASIC14.09□□□□□ -0.15
MTHFRP42898 RBFADN-204ENST00000568911 5187 ntTSL 2 BASIC14.09□□□□□ -0.15
MTHFRP42898 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
MTHFRP42898 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
MTHFRP42898 AC007431.1-201ENST00000578662 1412 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
MTHFRP42898 FSTL4-201ENST00000265342 5419 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
MTHFRP42898 KLHL21-201ENST00000377658 4487 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
MTHFRP42898 CNGB1-202ENST00000311183 1633 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
MTHFRP42898 DAP3-201ENST00000343043 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
MTHFRP42898 COL6A4P2-202ENST00000504443 2753 ntBASIC14.09□□□□□ -0.15
MTHFRP42898 AC027288.3-202ENST00000550268 1820 ntTSL 2 BASIC14.09□□□□□ -0.15
MTHFRP42898 DSN1-203ENST00000373750 2233 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
MTHFRP42898 ZEB2-204ENST00000409487 5361 ntAPPRIS P2 TSL 5 BASIC14.09□□□□□ -0.15
MTHFRP42898 SLIT1-201ENST00000266058 7925 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
MTHFRP42898 PDZD11-201ENST00000239666 1043 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
MTHFRP42898 PDLIM5-203ENST00000359265 1189 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
MTHFRP42898 IGHV3-11-201ENST00000390601 473 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
MTHFRP42898 SERF2-204ENST00000402131 586 ntTSL 2 BASIC14.09□□□□□ -0.15
MTHFRP42898 AL954722.1-201ENST00000431238 259 ntBASIC14.09□□□□□ -0.15
MTHFRP42898 AC105443.1-201ENST00000433754 712 ntBASIC14.09□□□□□ -0.15
MTHFRP42898 AC004969.1-201ENST00000471553 578 ntTSL 5 BASIC14.09□□□□□ -0.15
MTHFRP42898 AAMDC-210ENST00000532481 690 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
MTHFRP42898 DIO3OS-211ENST00000557532 712 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
MTHFRP42898 AC026583.1-201ENST00000561310 569 ntTSL 4 BASIC14.09□□□□□ -0.15
MTHFRP42898 AC116025.1-201ENST00000575404 415 ntTSL 3 BASIC14.09□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms