Protein–RNA interactions for Protein: P35125

USP6, Ubiquitin carboxyl-terminal hydrolase 6, humanhuman

Predictions only

Length 1,406 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP6P35125 RPL19P20-201ENST00000415648 591 ntBASIC17.71■□□□□ 0.43
USP6P35125 FAM157A-201ENST00000437428 1141 ntTSL 3 BASIC17.71■□□□□ 0.43
USP6P35125 AL137077.1-201ENST00000442115 528 ntBASIC17.71■□□□□ 0.43
USP6P35125 AC092295.1-201ENST00000446262 434 ntTSL 3 BASIC17.71■□□□□ 0.43
USP6P35125 CDK2AP2P2-201ENST00000478512 367 ntBASIC17.71■□□□□ 0.43
USP6P35125 PSMD6-209ENST00000482510 1176 ntTSL 5 BASIC17.71■□□□□ 0.43
USP6P35125 AC106789.1-201ENST00000512927 570 ntTSL 4 BASIC17.71■□□□□ 0.43
USP6P35125 NEMF-210ENST00000556672 590 ntTSL 2 BASIC17.71■□□□□ 0.43
USP6P35125 AC005920.4-201ENST00000573301 492 ntTSL 4 BASIC17.71■□□□□ 0.43
USP6P35125 ANAPC11-214ENST00000578544 403 ntTSL 3 BASIC17.71■□□□□ 0.43
USP6P35125 RBP1-206ENST00000617459 667 ntTSL 2 BASIC17.71■□□□□ 0.43
USP6P35125 PKMP1-201ENST00000455804 1523 ntBASIC17.71■□□□□ 0.43
USP6P35125 FAM95B1-211ENST00000592053 1541 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
USP6P35125 AL669942.1-203ENST00000610972 1541 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
USP6P35125 MAGED2-205ENST00000375060 1798 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
USP6P35125 FBLN1-208ENST00000442170 2531 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
USP6P35125 TMEM130-201ENST00000339375 3015 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
USP6P35125 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
USP6P35125 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
USP6P35125 LDLRAD3-202ENST00000524419 1996 ntTSL 5 BASIC17.7■□□□□ 0.42
USP6P35125 IGHG4-202ENST00000641978 2597 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
USP6P35125 BHMT2-201ENST00000255192 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
USP6P35125 RPUSD4-208ENST00000533628 2053 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
USP6P35125 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC17.7■□□□□ 0.42
USP6P35125 DDX12P-201ENST00000432996 2947 ntBASIC17.7■□□□□ 0.42
USP6P35125 ZNF101-203ENST00000415784 1552 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
USP6P35125 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
USP6P35125 C3orf36-201ENST00000408895 1668 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
USP6P35125 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
USP6P35125 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
USP6P35125 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
USP6P35125 NFATC2-207ENST00000610033 2740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
USP6P35125 FPR2-203ENST00000598953 1544 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
USP6P35125 CCL24-201ENST00000222902 582 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
USP6P35125 MRPS28-201ENST00000276585 850 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
USP6P35125 LCE2D-201ENST00000368784 609 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
USP6P35125 ATP6AP2-202ENST00000423649 1093 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
USP6P35125 CIDEC-204ENST00000430427 877 ntTSL 3 BASIC17.7■□□□□ 0.42
USP6P35125 KRTAP9-10P-201ENST00000435672 207 ntBASIC17.7■□□□□ 0.42
USP6P35125 JPT1-205ENST00000470924 663 ntTSL 5 BASIC17.7■□□□□ 0.42
USP6P35125 RN7SL477P-201ENST00000488440 286 ntBASIC17.7■□□□□ 0.42
USP6P35125 ST3GAL1P1-201ENST00000513810 1014 ntBASIC17.7■□□□□ 0.42
USP6P35125 CNOT8-217ENST00000521450 1158 ntTSL 2 BASIC17.7■□□□□ 0.42
USP6P35125 IGHV3OR16-11-201ENST00000565524 349 ntBASIC17.7■□□□□ 0.42
USP6P35125 AD000091.1-201ENST00000592379 287 ntBASIC17.7■□□□□ 0.42
USP6P35125 ZNF677-207ENST00000598806 701 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
USP6P35125 AC104440.1-201ENST00000605010 343 ntBASIC17.7■□□□□ 0.42
USP6P35125 NRSN2-205ENST00000608467 504 ntTSL 5 BASIC17.7■□□□□ 0.42
USP6P35125 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
USP6P35125 TFG-202ENST00000418917 1716 ntAPPRIS ALT1 TSL 3 BASIC17.7■□□□□ 0.42
USP6P35125 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
USP6P35125 AIFM1P1-201ENST00000413342 1841 ntBASIC17.7■□□□□ 0.42
USP6P35125 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
USP6P35125 RFESD-201ENST00000311364 2722 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
USP6P35125 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
USP6P35125 OSER1-AS1-202ENST00000437730 1563 ntTSL 5 BASIC17.69■□□□□ 0.42
USP6P35125 ZCCHC12-201ENST00000310164 2231 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
USP6P35125 LILRA2-204ENST00000391738 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
USP6P35125 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
USP6P35125 DEGS1-202ENST00000391877 1345 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
USP6P35125 DNASE1L3-207ENST00000486455 1321 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
USP6P35125 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
USP6P35125 TACC1-208ENST00000520340 1976 ntTSL 5 BASIC17.69■□□□□ 0.42
USP6P35125 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
USP6P35125 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
USP6P35125 MINDY4-201ENST00000265299 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
USP6P35125 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC17.69■□□□□ 0.42
USP6P35125 SRSF5-201ENST00000394366 1638 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
USP6P35125 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
USP6P35125 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
USP6P35125 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
USP6P35125 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
USP6P35125 ATG13-215ENST00000529655 2566 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
USP6P35125 PPP1R8-203ENST00000373931 2651 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
USP6P35125 GNB5-203ENST00000396335 2678 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
USP6P35125 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
USP6P35125 TNN-203ENST00000622870 3719 ntTSL 5 BASIC17.69■□□□□ 0.42
USP6P35125 CAV2-202ENST00000343213 776 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
USP6P35125 CDCA4P3-201ENST00000442572 689 ntBASIC17.69■□□□□ 0.42
USP6P35125 BCRP5-201ENST00000514371 253 ntBASIC17.69■□□□□ 0.42
USP6P35125 LAMTOR1-208ENST00000545249 965 ntTSL 3 BASIC17.69■□□□□ 0.42
USP6P35125 AC011603.2-201ENST00000548149 675 ntTSL 3 BASIC17.69■□□□□ 0.42
USP6P35125 SLC25A3-212ENST00000549338 1285 ntAPPRIS ALT1 TSL 3 BASIC17.69■□□□□ 0.42
USP6P35125 ORMDL2-204ENST00000550836 438 ntTSL 3 BASIC17.69■□□□□ 0.42
USP6P35125 AL157871.2-201ENST00000556212 552 ntTSL 3 BASIC17.69■□□□□ 0.42
USP6P35125 TRPM1-210ENST00000559179 1002 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
USP6P35125 OSGIN1-206ENST00000565123 833 ntTSL 2 BASIC17.69■□□□□ 0.42
USP6P35125 MIR4309-201ENST00000582498 83 ntBASIC17.69■□□□□ 0.42
USP6P35125 AC092634.8-201ENST00000639687 773 ntTSL 5 BASIC17.69■□□□□ 0.42
USP6P35125 YWHAQ-202ENST00000381844 2216 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
USP6P35125 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
USP6P35125 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC17.69■□□□□ 0.42
USP6P35125 SERPINA1-220ENST00000636712 1485 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
USP6P35125 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
USP6P35125 IDH3A-207ENST00000558554 1595 ntTSL 2 BASIC17.69■□□□□ 0.42
USP6P35125 GLDC-216ENST00000639639 1559 ntTSL 3 BASIC17.69■□□□□ 0.42
USP6P35125 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC17.69■□□□□ 0.42
USP6P35125 AL355102.3-201ENST00000554299 1678 ntBASIC17.69■□□□□ 0.42
USP6P35125 KDF1-202ENST00000616918 1651 ntTSL 2 BASIC17.69■□□□□ 0.42
USP6P35125 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms