Protein–RNA interactions for Protein: P05423

POLR3D, DNA-directed RNA polymerase III subunit RPC4, humanhuman

Predicted RBP Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR3DP05423 TBKBP1-201ENST00000361722 4121 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
POLR3DP05423 IFT172-202ENST00000359466 2207 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
POLR3DP05423 SGMS1-203ENST00000429490 3634 ntTSL 5 BASIC16.17■□□□□ 0.18
POLR3DP05423 B4GALT6-201ENST00000237019 2128 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
POLR3DP05423 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
POLR3DP05423 ZNF691-201ENST00000372502 1910 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
POLR3DP05423 TJAP1-208ENST00000438588 2716 ntTSL 5 BASIC16.16■□□□□ 0.18
POLR3DP05423 PHF21B-201ENST00000313237 3671 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
POLR3DP05423 TMEM130-203ENST00000416379 2881 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
POLR3DP05423 NEK4-207ENST00000535191 2452 ntTSL 2 BASIC16.16■□□□□ 0.18
POLR3DP05423 OLFML2B-202ENST00000367938 1153 ntTSL 2 BASIC16.16■□□□□ 0.18
POLR3DP05423 PIFO-201ENST00000369737 746 ntTSL 2 BASIC16.16■□□□□ 0.18
POLR3DP05423 LST1-204ENST00000376086 554 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
POLR3DP05423 GEMIN8P4-201ENST00000380526 729 ntBASIC16.16■□□□□ 0.18
POLR3DP05423 MIR566-201ENST00000385187 94 ntBASIC16.16■□□□□ 0.18
POLR3DP05423 MIR1227-201ENST00000408484 88 ntBASIC16.16■□□□□ 0.18
POLR3DP05423 IQCF4-202ENST00000422896 745 ntTSL 2 BASIC16.16■□□□□ 0.18
POLR3DP05423 KCNK16-204ENST00000437525 981 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
POLR3DP05423 GUSBP11-206ENST00000455485 3816 ntTSL 2 BASIC16.16■□□□□ 0.18
POLR3DP05423 DMKN-256ENST00000492341 738 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
POLR3DP05423 F11R-204ENST00000537746 1245 ntTSL 2 BASIC16.16■□□□□ 0.18
POLR3DP05423 AC078814.4-201ENST00000546650 327 ntBASIC16.16■□□□□ 0.18
POLR3DP05423 ATP2A1-AS1-201ENST00000561547 558 ntTSL 2 BASIC16.16■□□□□ 0.18
POLR3DP05423 AC012174.1-201ENST00000562349 714 ntTSL 3 BASIC16.16■□□□□ 0.18
POLR3DP05423 AL022344.2-201ENST00000568976 968 ntBASIC16.16■□□□□ 0.18
POLR3DP05423 LINC00511-205ENST00000578206 908 ntTSL 3 BASIC16.16■□□□□ 0.18
POLR3DP05423 AC018761.2-201ENST00000585496 296 ntTSL 3 BASIC16.16■□□□□ 0.18
POLR3DP05423 PEBP1P2-201ENST00000603980 558 ntBASIC16.16■□□□□ 0.18
POLR3DP05423 PROX1-AS1-235ENST00000628896 711 ntTSL 5 BASIC16.16■□□□□ 0.18
POLR3DP05423 NHSL1-202ENST00000343505 6535 ntAPPRIS P3 TSL 5 BASIC16.16■□□□□ 0.18
POLR3DP05423 NCF2-201ENST00000367535 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
POLR3DP05423 CACNA1G-230ENST00000514717 6699 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
POLR3DP05423 AHCY-205ENST00000538132 2366 ntTSL 2 BASIC16.16■□□□□ 0.18
POLR3DP05423 MCF2L-204ENST00000375608 3648 ntTSL 5 BASIC16.16■□□□□ 0.18
POLR3DP05423 PXK-210ENST00000479241 2817 ntTSL 2 BASIC16.16■□□□□ 0.18
POLR3DP05423 ZNF683-205ENST00000436292 1712 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
POLR3DP05423 AC108024.1-201ENST00000626286 1721 ntBASIC16.16■□□□□ 0.18
POLR3DP05423 ATXN2L-215ENST00000564304 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
POLR3DP05423 GMEB2-203ENST00000370077 4223 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
POLR3DP05423 SLC1A5-202ENST00000434726 1872 ntTSL 2 BASIC16.16■□□□□ 0.18
POLR3DP05423 NUP62CL-201ENST00000372466 1755 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
POLR3DP05423 ZNF493-208ENST00000599461 1769 ntBASIC16.15■□□□□ 0.18
POLR3DP05423 OAS3-201ENST00000228928 6719 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
POLR3DP05423 PBXIP1-203ENST00000368465 3144 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
POLR3DP05423 KDM8-212ENST00000568965 1655 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
POLR3DP05423 DLGAP3-202ENST00000373347 3856 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
POLR3DP05423 RXRG-204ENST00000619224 2252 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
POLR3DP05423 NPTN-201ENST00000345330 2444 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
POLR3DP05423 THTPA-201ENST00000288014 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
POLR3DP05423 BX255923.2-202ENST00000620833 2874 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
POLR3DP05423 TMEM182-201ENST00000409173 3198 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
POLR3DP05423 CANX-202ENST00000452673 4207 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
POLR3DP05423 TNNI2-201ENST00000252898 678 ntAPPRIS P3 TSL 3 BASIC16.15■□□□□ 0.18
POLR3DP05423 MRPL33-201ENST00000296102 518 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
POLR3DP05423 SIGLECL1-201ENST00000316401 1708 ntAPPRIS P3 TSL 2 BASIC16.15■□□□□ 0.18
POLR3DP05423 SF1-202ENST00000334944 3094 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
POLR3DP05423 GOLGA8IP-201ENST00000340249 1899 ntTSL 2 BASIC16.15■□□□□ 0.18
POLR3DP05423 MRPL33-202ENST00000379666 404 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
POLR3DP05423 DIO1-203ENST00000388876 606 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
POLR3DP05423 S100A13-203ENST00000392623 579 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
POLR3DP05423 SLC12A9-AS1-201ENST00000412754 369 ntTSL 3 BASIC16.15■□□□□ 0.18
POLR3DP05423 AL355482.2-201ENST00000428646 1145 ntTSL 2 BASIC16.15■□□□□ 0.18
POLR3DP05423 HMGB3-204ENST00000448905 812 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
POLR3DP05423 AL445471.1-201ENST00000456316 820 ntTSL 5 BASIC16.15■□□□□ 0.18
POLR3DP05423 AC010234.1-201ENST00000494599 870 ntBASIC16.15■□□□□ 0.18
POLR3DP05423 AL928742.1-201ENST00000497397 548 ntTSL 4 BASIC16.15■□□□□ 0.18
POLR3DP05423 DIO1-204ENST00000524406 626 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
POLR3DP05423 DIO1-213ENST00000532493 406 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
POLR3DP05423 FXYD6-FXYD2-201ENST00000532984 670 ntTSL 3 BASIC16.15■□□□□ 0.18
POLR3DP05423 AC092862.1-201ENST00000541534 533 ntBASIC16.15■□□□□ 0.18
POLR3DP05423 SLC25A3-215ENST00000551265 580 ntTSL 4 BASIC16.15■□□□□ 0.18
POLR3DP05423 AL139316.1-201ENST00000555643 568 ntTSL 3 BASIC16.15■□□□□ 0.18
POLR3DP05423 AC007431.1-201ENST00000578662 1412 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
POLR3DP05423 MBP-238ENST00000580402 915 ntTSL 5 BASIC16.15■□□□□ 0.18
POLR3DP05423 AC005357.2-202ENST00000590507 1060 ntBASIC16.15■□□□□ 0.18
POLR3DP05423 AC093567.1-201ENST00000590649 877 ntTSL 3 BASIC16.15■□□□□ 0.18
POLR3DP05423 MCEMP1-202ENST00000597445 763 ntAPPRIS ALT2 TSL 3 BASIC16.15■□□□□ 0.18
POLR3DP05423 RBM15-203ENST00000602849 3368 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
POLR3DP05423 URAHP-205ENST00000610227 398 ntBASIC16.15■□□□□ 0.18
POLR3DP05423 LINC01002-234ENST00000633808 848 ntTSL 5 BASIC16.15■□□□□ 0.18
POLR3DP05423 CAP1-203ENST00000372797 3105 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
POLR3DP05423 COL6A2-203ENST00000397763 3101 ntTSL 5 BASIC16.15■□□□□ 0.18
POLR3DP05423 PIGG-217ENST00000509768 3121 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
POLR3DP05423 GSE1-203ENST00000405402 4366 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
POLR3DP05423 FFAR4-202ENST00000371483 3653 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
POLR3DP05423 GPATCH2L-202ENST00000312858 2438 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
POLR3DP05423 AL162431.2-201ENST00000358073 2424 ntTSL 2 BASIC16.15■□□□□ 0.18
POLR3DP05423 ZNF501-205ENST00000620116 3382 ntAPPRIS P1 TSL 4 BASIC16.15■□□□□ 0.18
POLR3DP05423 APBB3-202ENST00000356738 1804 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
POLR3DP05423 DUOXA1-205ENST00000558422 1678 ntTSL 1 (best) BASIC16.14■□□□□ 0.18
POLR3DP05423 AC092171.2-201ENST00000444210 3251 ntTSL 5 BASIC16.14■□□□□ 0.18
POLR3DP05423 VAMP2-201ENST00000316509 2153 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
POLR3DP05423 AL358781.1-202ENST00000321081 1360 ntBASIC16.14■□□□□ 0.17
POLR3DP05423 SGTB-201ENST00000381007 5469 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
POLR3DP05423 R3HDM2-204ENST00000402412 4372 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
POLR3DP05423 AC105345.1-202ENST00000382488 3204 ntTSL 2 BASIC16.14■□□□□ 0.17
POLR3DP05423 HBP1-212ENST00000485846 2420 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
POLR3DP05423 LILRA1-201ENST00000251372 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
POLR3DP05423 ATP5A1-201ENST00000282050 1945 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
POLR3DP05423 RGS22-201ENST00000360863 4296 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms