Protein–RNA interactions for Protein: P02654

APOC1, Apolipoprotein C-I, humanhuman

Predictions only

Length 83 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1P02654 TPX2-202ENST00000340513 3605 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
APOC1P02654 AC092143.1-201ENST00000556922 2776 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
APOC1P02654 SCAF8-203ENST00000417268 4944 ntTSL 2 BASIC12.07□□□□□ -0.48
APOC1P02654 CCDC178-201ENST00000300227 3087 ntAPPRIS P3 TSL 2 BASIC12.07□□□□□ -0.48
APOC1P02654 PRDM16-208ENST00000514189 4236 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
APOC1P02654 ASB3-204ENST00000406687 2205 ntTSL 2 BASIC12.07□□□□□ -0.48
APOC1P02654 TMEM192-203ENST00000506087 2225 ntTSL 2 BASIC12.07□□□□□ -0.48
APOC1P02654 AC012485.1-201ENST00000456601 2509 ntTSL 2 BASIC12.07□□□□□ -0.48
APOC1P02654 LIMS1-205ENST00000410093 1526 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
APOC1P02654 C4orf33-201ENST00000281146 6170 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
APOC1P02654 POU2AF1-201ENST00000393067 3295 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
APOC1P02654 GPM6B-202ENST00000355135 1673 ntAPPRIS ALT1 TSL 1 (best) BASIC12.07□□□□□ -0.48
APOC1P02654 RGL4-202ENST00000401461 2420 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
APOC1P02654 EFHC1-221ENST00000636489 2421 ntTSL 5 BASIC12.07□□□□□ -0.48
APOC1P02654 GLB1L-201ENST00000295759 2745 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
APOC1P02654 NPLOC4-202ENST00000374747 5538 ntTSL 2 BASIC12.07□□□□□ -0.48
APOC1P02654 NOL4L-203ENST00000359676 5991 ntTSL 2 BASIC12.07□□□□□ -0.48
APOC1P02654 CCDC187-203ENST00000569961 3158 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
APOC1P02654 BDH1-202ENST00000392378 3455 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
APOC1P02654 RBM15-201ENST00000369784 4244 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
APOC1P02654 ERVK13-1-205ENST00000568395 5578 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
APOC1P02654 GPR179-203ENST00000616987 7980 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
APOC1P02654 AC106827.1-201ENST00000366454 431 ntBASIC12.07□□□□□ -0.48
APOC1P02654 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
APOC1P02654 MIR645-201ENST00000385283 94 ntBASIC12.07□□□□□ -0.48
APOC1P02654 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC12.07□□□□□ -0.48
APOC1P02654 KRT8P18-201ENST00000413425 1445 ntBASIC12.07□□□□□ -0.48
APOC1P02654 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC12.07□□□□□ -0.48
APOC1P02654 AP1B1P1-201ENST00000432373 827 ntTSL 3 BASIC12.07□□□□□ -0.48
APOC1P02654 NAGK-204ENST00000443872 878 ntTSL 3 BASIC12.07□□□□□ -0.48
APOC1P02654 PRKCZ-AS1-202ENST00000444529 622 ntTSL 3 BASIC12.07□□□□□ -0.48
APOC1P02654 CCDC18-AS1-219ENST00000451302 1212 ntTSL 3 BASIC12.07□□□□□ -0.48
APOC1P02654 ESRRAP2-203ENST00000453309 822 ntTSL 5 BASIC12.07□□□□□ -0.48
APOC1P02654 EGFR-207ENST00000455089 3844 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
APOC1P02654 RN7SL258P-201ENST00000478664 300 ntBASIC12.07□□□□□ -0.48
APOC1P02654 LINC00477-201ENST00000483544 1710 ntTSL 2 BASIC12.07□□□□□ -0.48
APOC1P02654 PMP22-206ENST00000494511 872 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
APOC1P02654 SCARNA20.5-201ENST00000516991 142 ntBASIC12.07□□□□□ -0.48
APOC1P02654 AC087269.1-202ENST00000519147 400 ntTSL 3 BASIC12.07□□□□□ -0.48
APOC1P02654 TRPM5-202ENST00000528453 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
APOC1P02654 SMG6-203ENST00000536871 1865 ntTSL 2 BASIC12.07□□□□□ -0.48
APOC1P02654 SLC2A14-213ENST00000539924 1873 ntAPPRIS ALT2 TSL 2 BASIC12.07□□□□□ -0.48
APOC1P02654 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC12.07□□□□□ -0.48
APOC1P02654 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC12.07□□□□□ -0.48
APOC1P02654 RN7SL665P-201ENST00000578793 300 ntBASIC12.07□□□□□ -0.48
APOC1P02654 MIR4326-201ENST00000582203 59 ntBASIC12.07□□□□□ -0.48
APOC1P02654 KC6-205ENST00000599934 556 ntTSL 4 BASIC12.07□□□□□ -0.48
APOC1P02654 HNRNPDL-207ENST00000614627 3968 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
APOC1P02654 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC12.07□□□□□ -0.48
APOC1P02654 EIF3F-209ENST00000640290 372 ntTSL 5 BASIC12.07□□□□□ -0.48
APOC1P02654 AGAP2-203ENST00000547588 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
APOC1P02654 ENG-204ENST00000480266 2804 ntAPPRIS ALT2 TSL 2 BASIC12.07□□□□□ -0.48
APOC1P02654 PID1-204ENST00000409462 2387 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
APOC1P02654 TRIM35-201ENST00000305364 4229 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
APOC1P02654 AC006254.1-201ENST00000468472 5640 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
APOC1P02654 SLC7A8-205ENST00000453702 1752 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
APOC1P02654 TESMIN-204ENST00000443940 3495 ntTSL 2 BASIC12.07□□□□□ -0.48
APOC1P02654 TAGLN2-203ENST00000368097 1604 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
APOC1P02654 TMEM144-209ENST00000509278 1633 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
APOC1P02654 RCC2P5-201ENST00000492126 1487 ntBASIC12.07□□□□□ -0.48
APOC1P02654 LIX1L-201ENST00000604000 3975 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
APOC1P02654 AC011287.1-201ENST00000639998 1349 ntTSL 5 BASIC12.07□□□□□ -0.48
APOC1P02654 ZNF799-202ENST00000430385 2583 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
APOC1P02654 TNRC18P1-201ENST00000502875 3650 ntBASIC12.07□□□□□ -0.48
APOC1P02654 MSMO1-201ENST00000261507 2269 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
APOC1P02654 SLC6A6-204ENST00000613060 6526 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
APOC1P02654 SPINT1-201ENST00000344051 3056 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
APOC1P02654 NRDC-202ENST00000354831 3895 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
APOC1P02654 PER1-211ENST00000581082 4521 ntTSL 5 BASIC12.07□□□□□ -0.48
APOC1P02654 CARS-214ENST00000529772 2637 ntTSL 2 BASIC12.07□□□□□ -0.48
APOC1P02654 ARHGAP33-204ENST00000378944 4219 ntAPPRIS ALT2 TSL 2 BASIC12.07□□□□□ -0.48
APOC1P02654 FTSJ1-203ENST00000396894 1669 ntTSL 2 BASIC12.06□□□□□ -0.48
APOC1P02654 PBXIP1-203ENST00000368465 3144 ntAPPRIS ALT2 TSL 2 BASIC12.06□□□□□ -0.48
APOC1P02654 SPERT-204ENST00000610924 1505 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
APOC1P02654 DYNC1I1-202ENST00000359388 2843 ntAPPRIS ALT1 TSL 1 (best) BASIC12.06□□□□□ -0.48
APOC1P02654 DSG1-202ENST00000462981 1857 ntTSL 2 BASIC12.06□□□□□ -0.48
APOC1P02654 PES1P2-201ENST00000449745 1735 ntBASIC12.06□□□□□ -0.48
APOC1P02654 CELF2-216ENST00000637215 2724 ntTSL 5 BASIC12.06□□□□□ -0.48
APOC1P02654 SLC35F1-201ENST00000360388 4852 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
APOC1P02654 GATC-203ENST00000551765 4244 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
APOC1P02654 PCDHGB1-201ENST00000523390 4590 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
APOC1P02654 ATG4C-201ENST00000317868 2938 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
APOC1P02654 KRT8P31-201ENST00000504812 1408 ntBASIC12.06□□□□□ -0.48
APOC1P02654 GPRASP1-201ENST00000361600 5971 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
APOC1P02654 ELP2-221ENST00000542824 2288 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
APOC1P02654 AC005394.2-201ENST00000592347 3113 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
APOC1P02654 RHOXF1-201ENST00000217999 769 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
APOC1P02654 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC12.06□□□□□ -0.48
APOC1P02654 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
APOC1P02654 HIST2H2AA3-201ENST00000369159 549 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
APOC1P02654 APOL3-207ENST00000424878 1240 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
APOC1P02654 ISCA2P1-201ENST00000425548 448 ntBASIC12.06□□□□□ -0.48
APOC1P02654 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC12.06□□□□□ -0.48
APOC1P02654 WBP2-203ENST00000433525 928 ntTSL 2 BASIC12.06□□□□□ -0.48
APOC1P02654 CLDN11-207ENST00000486975 1139 ntTSL 2 BASIC12.06□□□□□ -0.48
APOC1P02654 AC108725.1-201ENST00000495472 409 ntBASIC12.06□□□□□ -0.48
APOC1P02654 CYB561A3-219ENST00000544118 1136 ntTSL 5 BASIC12.06□□□□□ -0.48
APOC1P02654 ADSSL1-208ENST00000555674 520 ntTSL 3 BASIC12.06□□□□□ -0.48
APOC1P02654 AC090617.4-201ENST00000572404 422 ntTSL 3 BASIC12.06□□□□□ -0.48
APOC1P02654 PHBP15-201ENST00000574228 665 ntBASIC12.06□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms