Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 AL031595.1-201ENST00000623969 4709 ntBASIC12.11□□□□□ -0.47
ZIC3O60481 ATP5A1-201ENST00000282050 1945 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
ZIC3O60481 UGT3A1-203ENST00000503189 1902 ntTSL 2 BASIC12.11□□□□□ -0.47
ZIC3O60481 OSBPL8-203ENST00000393250 3157 ntAPPRIS ALT1 TSL 5 BASIC12.11□□□□□ -0.47
ZIC3O60481 NFIC-206ENST00000589123 8068 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
ZIC3O60481 TSPAN31-201ENST00000257910 1849 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
ZIC3O60481 MCRIP1-207ENST00000574190 2775 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
ZIC3O60481 KRT33B-201ENST00000251646 1607 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
ZIC3O60481 XIRP1-203ENST00000421646 2596 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
ZIC3O60481 SPAAR-203ENST00000636776 1538 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
ZIC3O60481 MKRN2-202ENST00000411987 1436 ntTSL 2 BASIC12.11□□□□□ -0.47
ZIC3O60481 TMEM9B-202ENST00000525069 1433 ntTSL 2 BASIC12.11□□□□□ -0.47
ZIC3O60481 PCDHGA6-202ENST00000610583 5650 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
ZIC3O60481 FLJ40288-201ENST00000332558 1998 ntTSL 2 BASIC12.1□□□□□ -0.47
ZIC3O60481 DNAJB13-201ENST00000339764 1875 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
ZIC3O60481 ZNF621-204ENST00000431278 2613 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
ZIC3O60481 NDRG4-236ENST00000566192 3265 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
ZIC3O60481 ZFAND1-201ENST00000220669 1798 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
ZIC3O60481 ZFAND1-221ENST00000523096 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC12.1□□□□□ -0.47
ZIC3O60481 OTUD4-201ENST00000447906 3829 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
ZIC3O60481 FAM13B-203ENST00000425075 3098 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
ZIC3O60481 Z98259.1-201ENST00000564261 1697 ntBASIC12.1□□□□□ -0.47
ZIC3O60481 COL16A1-202ENST00000373668 3643 ntTSL 2 BASIC12.1□□□□□ -0.47
ZIC3O60481 PROZ-201ENST00000342783 1551 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
ZIC3O60481 EHMT2-203ENST00000375537 3965 ntAPPRIS P4 TSL 1 (best) BASIC12.1□□□□□ -0.47
ZIC3O60481 EPS8L3-201ENST00000361852 2130 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
ZIC3O60481 AKNA-203ENST00000312033 3334 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
ZIC3O60481 TUBGCP3-201ENST00000261965 3899 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
ZIC3O60481 FIBCD1-204ENST00000448616 3119 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
ZIC3O60481 AC034205.3-201ENST00000603595 1376 ntBASIC12.1□□□□□ -0.47
ZIC3O60481 PCDHB19P-202ENST00000625133 2914 ntBASIC12.1□□□□□ -0.47
ZIC3O60481 APP-205ENST00000358918 2366 ntTSL 5 BASIC12.1□□□□□ -0.47
ZIC3O60481 CICP17-201ENST00000418553 2377 ntBASIC12.1□□□□□ -0.47
ZIC3O60481 ZNF568-206ENST00000455427 2378 ntTSL 2 BASIC12.1□□□□□ -0.47
ZIC3O60481 NEK3-205ENST00000610828 2396 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
ZIC3O60481 HIGD2A-201ENST00000274787 668 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
ZIC3O60481 LMO1-201ENST00000335790 1279 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
ZIC3O60481 RN7SKP255-201ENST00000363442 313 ntBASIC12.1□□□□□ -0.47
ZIC3O60481 RN7SKP203-201ENST00000363618 332 ntBASIC12.1□□□□□ -0.47
ZIC3O60481 RN7SKP71-201ENST00000364558 318 ntBASIC12.1□□□□□ -0.47
ZIC3O60481 7SK.1-201ENST00000365328 331 ntBASIC12.1□□□□□ -0.47
ZIC3O60481 S100A3-202ENST00000368713 856 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
ZIC3O60481 PIFO-201ENST00000369737 746 ntTSL 2 BASIC12.1□□□□□ -0.47
ZIC3O60481 UBIAD1-201ENST00000376804 825 ntTSL 2 BASIC12.1□□□□□ -0.47
ZIC3O60481 SNORA50D-201ENST00000408059 134 ntBASIC12.1□□□□□ -0.47
ZIC3O60481 AL513165.1-201ENST00000413915 289 ntTSL 3 BASIC12.1□□□□□ -0.47
ZIC3O60481 LINC01523-201ENST00000425385 450 ntTSL 2 BASIC12.1□□□□□ -0.47
ZIC3O60481 PRR34-AS1-203ENST00000451166 877 ntTSL 3 BASIC12.1□□□□□ -0.47
ZIC3O60481 AL021391.1-201ENST00000454439 545 ntTSL 4 BASIC12.1□□□□□ -0.47
ZIC3O60481 AL928742.1-201ENST00000497397 548 ntTSL 4 BASIC12.1□□□□□ -0.47
ZIC3O60481 VEGFA-219ENST00000518824 606 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
ZIC3O60481 LMO1-204ENST00000534484 770 ntAPPRIS ALT1 TSL 5 BASIC12.1□□□□□ -0.47
ZIC3O60481 WNT5B-206ENST00000542408 508 ntTSL 3 BASIC12.1□□□□□ -0.47
ZIC3O60481 AC090617.6-201ENST00000572790 443 ntTSL 3 BASIC12.1□□□□□ -0.47
ZIC3O60481 INCA1-203ENST00000575780 1221 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
ZIC3O60481 AC079336.3-201ENST00000577227 475 ntTSL 3 BASIC12.1□□□□□ -0.47
ZIC3O60481 KLKP1-202ENST00000597246 1125 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
ZIC3O60481 AC016586.1-201ENST00000600056 684 ntTSL 3 BASIC12.1□□□□□ -0.47
ZIC3O60481 KF455155.1-201ENST00000604493 303 ntBASIC12.1□□□□□ -0.47
ZIC3O60481 FO393412.1-201ENST00000619841 382 ntBASIC12.1□□□□□ -0.47
ZIC3O60481 SNORA50D-202ENST00000627561 132 ntBASIC12.1□□□□□ -0.47
ZIC3O60481 IL17RA-201ENST00000319363 8607 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
ZIC3O60481 CTRL-205ENST00000574481 1721 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
ZIC3O60481 PANX2-202ENST00000395842 3051 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
ZIC3O60481 LIMS1-204ENST00000409441 1627 ntAPPRIS ALT1 TSL 1 (best) BASIC12.1□□□□□ -0.47
ZIC3O60481 KCTD9-201ENST00000221200 3401 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
ZIC3O60481 CRTC1-202ENST00000338797 6929 ntAPPRIS ALT1 TSL 1 (best) BASIC12.1□□□□□ -0.47
ZIC3O60481 PCDHA5-203ENST00000614258 4248 ntBASIC12.1□□□□□ -0.47
ZIC3O60481 SDC2-201ENST00000302190 3759 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
ZIC3O60481 JPT1-202ENST00000356033 1519 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
ZIC3O60481 RAPH1-202ENST00000319170 9808 ntAPPRIS P4 TSL 1 (best) BASIC12.1□□□□□ -0.47
ZIC3O60481 ATP6V1B1-201ENST00000234396 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
ZIC3O60481 TRMT1L-201ENST00000367506 4392 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
ZIC3O60481 DRG2-202ENST00000395726 1897 ntTSL 5 BASIC12.1□□□□□ -0.47
ZIC3O60481 NCF2-201ENST00000367535 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
ZIC3O60481 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC12.1□□□□□ -0.47
ZIC3O60481 ABCA17P-202ENST00000469908 4188 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
ZIC3O60481 ALDH7A1-234ENST00000637782 1773 ntAPPRIS ALT1 TSL 5 BASIC12.1□□□□□ -0.47
ZIC3O60481 AC008038.1-201ENST00000634247 1314 ntBASIC12.1□□□□□ -0.47
ZIC3O60481 AC114271.1-201ENST00000612689 2813 ntBASIC12.1□□□□□ -0.47
ZIC3O60481 NUB1-201ENST00000413040 3180 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
ZIC3O60481 EIF4G1-218ENST00000434061 5026 ntTSL 2 BASIC12.1□□□□□ -0.47
ZIC3O60481 AC000120.1-201ENST00000414227 1589 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
ZIC3O60481 AC114689.3-201ENST00000583687 2991 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
ZIC3O60481 AC015712.2-202ENST00000560068 3213 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
ZIC3O60481 KIFC3-202ENST00000421376 3128 ntTSL 2 BASIC12.09□□□□□ -0.47
ZIC3O60481 APEX1-201ENST00000216714 1484 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
ZIC3O60481 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
ZIC3O60481 FER1L4-204ENST00000430275 3281 ntTSL 5 BASIC12.09□□□□□ -0.47
ZIC3O60481 PBRM1-204ENST00000394830 5071 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
ZIC3O60481 NEK4-202ENST00000383721 2576 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
ZIC3O60481 ZSCAN32-202ENST00000396846 3173 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
ZIC3O60481 CCDC180-210ENST00000529487 5242 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
ZIC3O60481 AL157832.2-205ENST00000597245 1649 ntBASIC12.09□□□□□ -0.47
ZIC3O60481 COL22A1-201ENST00000303045 6346 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
ZIC3O60481 ZNF641-201ENST00000301042 4544 ntTSL 5 BASIC12.09□□□□□ -0.47
ZIC3O60481 TONSL-201ENST00000409379 4502 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
ZIC3O60481 VMP1-201ENST00000262291 2712 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
ZIC3O60481 NHP2-202ENST00000314397 599 ntTSL 2 BASIC12.09□□□□□ -0.47
ZIC3O60481 SIRPB3P-201ENST00000340424 1216 ntBASIC12.09□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 55.1 ms