Protein–RNA interactions for Protein: Q9NWS1

PARPBP, PCNA-interacting partner, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PARPBPQ9NWS1 EIF4G1-205ENST00000382330 5129 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
PARPBPQ9NWS1 BOLA3-201ENST00000295326 444 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
PARPBPQ9NWS1 HPGD-201ENST00000296521 1171 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
PARPBPQ9NWS1 TMEM208-201ENST00000304800 793 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
PARPBPQ9NWS1 SH3BGRL3-202ENST00000319041 768 ntTSL 2 BASIC12.21□□□□□ -0.45
PARPBPQ9NWS1 PPIE-202ENST00000356511 1079 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
PARPBPQ9NWS1 S100A2-203ENST00000368709 457 ntAPPRIS P1 TSL 3 BASIC12.21□□□□□ -0.45
PARPBPQ9NWS1 SPIN2B-203ENST00000374910 725 ntTSL 3 BASIC12.21□□□□□ -0.45
PARPBPQ9NWS1 OR7E115P-201ENST00000382617 1024 ntBASIC12.21□□□□□ -0.45
PARPBPQ9NWS1 KAZN-204ENST00000400797 1295 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
PARPBPQ9NWS1 AL021707.5-201ENST00000420118 461 ntTSL 5 BASIC12.21□□□□□ -0.45
PARPBPQ9NWS1 GRAMD1A-203ENST00000424536 808 ntTSL 2 BASIC12.21□□□□□ -0.45
PARPBPQ9NWS1 AL356056.1-201ENST00000437899 369 ntTSL 5 BASIC12.21□□□□□ -0.45
PARPBPQ9NWS1 SAP30L-203ENST00000440364 792 ntTSL 3 BASIC12.21□□□□□ -0.45
PARPBPQ9NWS1 RPL18AP3-201ENST00000462885 528 ntBASIC12.21□□□□□ -0.45
PARPBPQ9NWS1 VENTXP3-201ENST00000546480 773 ntBASIC12.21□□□□□ -0.45
PARPBPQ9NWS1 AL132994.1-201ENST00000554098 400 ntBASIC12.21□□□□□ -0.45
PARPBPQ9NWS1 LINC01584-201ENST00000562495 676 ntTSL 5 BASIC12.21□□□□□ -0.45
PARPBPQ9NWS1 TMEM202-AS1-201ENST00000562573 723 ntTSL 3 BASIC12.21□□□□□ -0.45
PARPBPQ9NWS1 RPL19-207ENST00000582193 792 ntAPPRIS ALT1 TSL 5 BASIC12.21□□□□□ -0.45
PARPBPQ9NWS1 SPINT2-204ENST00000587090 1246 ntAPPRIS ALT2 TSL 3 BASIC12.21□□□□□ -0.45
PARPBPQ9NWS1 DBP-202ENST00000593500 712 ntTSL 2 BASIC12.21□□□□□ -0.45
PARPBPQ9NWS1 AC018755.3-203ENST00000597710 411 ntTSL 3 BASIC12.21□□□□□ -0.45
PARPBPQ9NWS1 AC107464.3-201ENST00000609172 737 ntBASIC12.21□□□□□ -0.45
PARPBPQ9NWS1 AC073352.2-201ENST00000609385 439 ntBASIC12.21□□□□□ -0.45
PARPBPQ9NWS1 AC005618.3-201ENST00000624928 458 ntBASIC12.21□□□□□ -0.45
PARPBPQ9NWS1 SLC12A5-219ENST00000628272 401 ntTSL 3 BASIC12.21□□□□□ -0.45
PARPBPQ9NWS1 PTPRK-204ENST00000368210 5025 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
PARPBPQ9NWS1 POMT1-201ENST00000341012 2912 ntTSL 2 BASIC12.21□□□□□ -0.45
PARPBPQ9NWS1 GOLGA6L10-209ENST00000621197 4160 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
PARPBPQ9NWS1 LINC00637-201ENST00000556586 2056 ntTSL 2 BASIC12.21□□□□□ -0.45
PARPBPQ9NWS1 FAM156A-208ENST00000615092 2098 ntAPPRIS P2 TSL 5 BASIC12.21□□□□□ -0.45
PARPBPQ9NWS1 MKLN1-203ENST00000421797 2460 ntTSL 2 BASIC12.21□□□□□ -0.45
PARPBPQ9NWS1 GIPR-205ENST00000590918 3289 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
PARPBPQ9NWS1 AC015712.2-202ENST00000560068 3213 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
PARPBPQ9NWS1 UBE3A-209ENST00000625778 3217 ntTSL 5 BASIC12.21□□□□□ -0.46
PARPBPQ9NWS1 APOBEC3D-202ENST00000427494 1961 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
PARPBPQ9NWS1 TMEM9-203ENST00000367333 1564 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.46
PARPBPQ9NWS1 DDX46-212ENST00000628477 1584 ntTSL 5 BASIC12.21□□□□□ -0.46
PARPBPQ9NWS1 MTMR2-201ENST00000346299 4681 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
PARPBPQ9NWS1 MTMR2-203ENST00000393223 4681 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
PARPBPQ9NWS1 PLCD4-202ENST00000417849 2738 ntAPPRIS P2 TSL 5 BASIC12.21□□□□□ -0.46
PARPBPQ9NWS1 SOGA1-201ENST00000237536 14371 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.46
PARPBPQ9NWS1 CANX-202ENST00000452673 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
PARPBPQ9NWS1 CYFIP2-219ENST00000616178 4210 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
PARPBPQ9NWS1 ASS1-203ENST00000372393 1548 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.46
PARPBPQ9NWS1 GOLGA8IP-201ENST00000340249 1899 ntTSL 2 BASIC12.21□□□□□ -0.46
PARPBPQ9NWS1 GNPDA1-204ENST00000503794 2622 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
PARPBPQ9NWS1 YIPF1-201ENST00000072644 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
PARPBPQ9NWS1 FAM200B-201ENST00000422728 2962 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
PARPBPQ9NWS1 ABI2-213ENST00000424558 2240 ntTSL 2 BASIC12.21□□□□□ -0.46
PARPBPQ9NWS1 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC12.21□□□□□ -0.46
PARPBPQ9NWS1 SLC25A19-205ENST00000442286 1496 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.46
PARPBPQ9NWS1 TPM3P9-201ENST00000424846 2920 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
PARPBPQ9NWS1 VAPB-202ENST00000395802 1834 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
PARPBPQ9NWS1 TMEM78-201ENST00000323223 2175 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
PARPBPQ9NWS1 CAPN14-202ENST00000403897 2197 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
PARPBPQ9NWS1 CATSPERD-202ENST00000381624 2516 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
PARPBPQ9NWS1 ALAD-201ENST00000409155 3173 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
PARPBPQ9NWS1 AP3M2-202ENST00000396926 3545 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
PARPBPQ9NWS1 BCAP29-201ENST00000005259 4572 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
PARPBPQ9NWS1 GLRX3-202ENST00000368644 3827 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
PARPBPQ9NWS1 APOB-202ENST00000399256 3128 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
PARPBPQ9NWS1 AL513497.1-201ENST00000624273 2083 ntBASIC12.2□□□□□ -0.46
PARPBPQ9NWS1 CDH4-203ENST00000614565 6513 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
PARPBPQ9NWS1 MARCH9-202ENST00000548358 1668 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
PARPBPQ9NWS1 APBB2-211ENST00000506352 3316 ntAPPRIS ALT1 TSL 5 BASIC12.2□□□□□ -0.46
PARPBPQ9NWS1 DHX38-201ENST00000268482 4608 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
PARPBPQ9NWS1 RAB3D-201ENST00000222120 4273 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
PARPBPQ9NWS1 FGD4-203ENST00000472289 1629 ntTSL 2 BASIC12.2□□□□□ -0.46
PARPBPQ9NWS1 CSF2RA-219ENST00000501036 1622 ntTSL 2 BASIC12.2□□□□□ -0.46
PARPBPQ9NWS1 MYO1D-202ENST00000394649 5451 ntTSL 5 BASIC12.2□□□□□ -0.46
PARPBPQ9NWS1 PATL2-207ENST00000560775 1913 ntAPPRIS P3 TSL 5 BASIC12.2□□□□□ -0.46
PARPBPQ9NWS1 CR382287.2-201ENST00000623370 1942 ntTSL 2 BASIC12.2□□□□□ -0.46
PARPBPQ9NWS1 B9D1-202ENST00000268841 755 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
PARPBPQ9NWS1 TMEM256-201ENST00000302422 486 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
PARPBPQ9NWS1 CST9L-201ENST00000376979 959 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
PARPBPQ9NWS1 AL391839.2-201ENST00000412085 383 ntTSL 5 BASIC12.2□□□□□ -0.46
PARPBPQ9NWS1 SEPT7-AS1-201ENST00000412856 587 ntTSL 4 BASIC12.2□□□□□ -0.46
PARPBPQ9NWS1 BUD31-205ENST00000456893 512 ntTSL 5 BASIC12.2□□□□□ -0.46
PARPBPQ9NWS1 AC025186.1-201ENST00000478174 870 ntBASIC12.2□□□□□ -0.46
PARPBPQ9NWS1 RN7SL23P-201ENST00000484055 275 ntBASIC12.2□□□□□ -0.46
PARPBPQ9NWS1 AC034231.1-201ENST00000507251 537 ntTSL 4 BASIC12.2□□□□□ -0.46
PARPBPQ9NWS1 AC105389.3-201ENST00000508038 907 ntTSL 5 BASIC12.2□□□□□ -0.46
PARPBPQ9NWS1 PRR7-AS1-204ENST00000514846 543 ntTSL 2 BASIC12.2□□□□□ -0.46
PARPBPQ9NWS1 AC008050.1-201ENST00000554926 632 ntTSL 3 BASIC12.2□□□□□ -0.46
PARPBPQ9NWS1 AC092139.2-201ENST00000563750 754 ntTSL 3 BASIC12.2□□□□□ -0.46
PARPBPQ9NWS1 AC005696.1-201ENST00000572876 443 ntTSL 2 BASIC12.2□□□□□ -0.46
PARPBPQ9NWS1 AC007952.4-201ENST00000573866 637 ntBASIC12.2□□□□□ -0.46
PARPBPQ9NWS1 RPL17P45-201ENST00000586289 509 ntBASIC12.2□□□□□ -0.46
PARPBPQ9NWS1 AC090386.1-202ENST00000586610 469 ntTSL 3 BASIC12.2□□□□□ -0.46
PARPBPQ9NWS1 WDR7-208ENST00000589935 544 ntTSL 4 BASIC12.2□□□□□ -0.46
PARPBPQ9NWS1 AP001269.2-201ENST00000590055 379 ntTSL 3 BASIC12.2□□□□□ -0.46
PARPBPQ9NWS1 AC087045.2-201ENST00000606279 1003 ntBASIC12.2□□□□□ -0.46
PARPBPQ9NWS1 ASNSD1-206ENST00000607062 968 ntTSL 5 BASIC12.2□□□□□ -0.46
PARPBPQ9NWS1 Metazoa_SRP.141-201ENST00000615072 282 ntBASIC12.2□□□□□ -0.46
PARPBPQ9NWS1 CPNE5-202ENST00000393189 2542 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
PARPBPQ9NWS1 DYSF-202ENST00000394120 6543 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
PARPBPQ9NWS1 CLIC4-201ENST00000374379 4346 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
PARPBPQ9NWS1 DLL4-201ENST00000249749 3372 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 68.2 ms