Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 MYT1-201ENST00000328439 5535 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
CCDC50Q8IVM0 RTL10-201ENST00000328554 6619 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
CCDC50Q8IVM0 HNRNPMP1-201ENST00000560685 1768 ntBASIC14.39□□□□□ -0.11
CCDC50Q8IVM0 KIF9-208ENST00000452770 2707 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CCDC50Q8IVM0 SAP30BP-225ENST00000584667 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CCDC50Q8IVM0 CTSS-202ENST00000448301 1421 ntTSL 2 BASIC14.39□□□□□ -0.11
CCDC50Q8IVM0 AC138761.6-201ENST00000583997 1423 ntBASIC14.39□□□□□ -0.11
CCDC50Q8IVM0 ETNPPL-202ENST00000411864 2028 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CCDC50Q8IVM0 DAXX-202ENST00000374542 2613 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
CCDC50Q8IVM0 CDC20-201ENST00000310955 1675 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CCDC50Q8IVM0 ZBTB44-202ENST00000397753 3951 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
CCDC50Q8IVM0 METAP1-201ENST00000296411 2791 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CCDC50Q8IVM0 ELOVL4-201ENST00000369816 3042 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CCDC50Q8IVM0 ARHGAP33-203ENST00000314737 3858 ntAPPRIS P3 TSL 2 BASIC14.39□□□□□ -0.11
CCDC50Q8IVM0 KIR2DL3-201ENST00000342376 1590 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CCDC50Q8IVM0 POTEB3-201ENST00000611217 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CCDC50Q8IVM0 MUC1-225ENST00000612778 1836 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
CCDC50Q8IVM0 ACSM2B-201ENST00000329697 2935 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CCDC50Q8IVM0 MCFD2-212ENST00000444761 4169 ntTSL 2 BASIC14.38□□□□□ -0.11
CCDC50Q8IVM0 DPAGT1-217ENST00000639704 1719 ntTSL 5 BASIC14.38□□□□□ -0.11
CCDC50Q8IVM0 SGSM3-201ENST00000248929 2969 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CCDC50Q8IVM0 TXNRD1-214ENST00000526691 3974 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CCDC50Q8IVM0 CTDP1-202ENST00000299543 3380 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
CCDC50Q8IVM0 KIR3DL1-203ENST00000391728 1871 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
CCDC50Q8IVM0 NCF4-202ENST00000397147 1641 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CCDC50Q8IVM0 AL356966.1-201ENST00000454752 2367 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CCDC50Q8IVM0 DIO1-216ENST00000613679 1856 ntAPPRIS ALT1 TSL 5 BASIC14.38□□□□□ -0.11
CCDC50Q8IVM0 UBA2-201ENST00000246548 4023 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CCDC50Q8IVM0 KLC2-206ENST00000417856 3015 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
CCDC50Q8IVM0 AXIN2-209ENST00000618960 4060 ntTSL 5 BASIC14.38□□□□□ -0.11
CCDC50Q8IVM0 ARF5-201ENST00000000233 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CCDC50Q8IVM0 ESD-202ENST00000378720 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CCDC50Q8IVM0 MIR1908-201ENST00000410394 80 ntBASIC14.38□□□□□ -0.11
CCDC50Q8IVM0 APOL3-207ENST00000424878 1240 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
CCDC50Q8IVM0 TIMP1-205ENST00000456754 1095 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CCDC50Q8IVM0 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC14.38□□□□□ -0.11
CCDC50Q8IVM0 AC108725.1-201ENST00000495472 409 ntBASIC14.38□□□□□ -0.11
CCDC50Q8IVM0 COQ10BP2-201ENST00000513804 724 ntBASIC14.38□□□□□ -0.11
CCDC50Q8IVM0 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC14.38□□□□□ -0.11
CCDC50Q8IVM0 AC009088.2-201ENST00000564743 463 ntTSL 5 BASIC14.38□□□□□ -0.11
CCDC50Q8IVM0 AC040162.4-201ENST00000574912 1185 ntAPPRIS P1 TSL 3 BASIC14.38□□□□□ -0.11
CCDC50Q8IVM0 MEG3_2.1-201ENST00000611456 105 ntBASIC14.38□□□□□ -0.11
CCDC50Q8IVM0 AC091544.8-201ENST00000619490 361 ntBASIC14.38□□□□□ -0.11
CCDC50Q8IVM0 C1orf232-202ENST00000635463 466 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
CCDC50Q8IVM0 ADAM32-206ENST00000519315 2168 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CCDC50Q8IVM0 SLC4A11-207ENST00000539553 2832 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
CCDC50Q8IVM0 RBM4-201ENST00000310092 1694 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CCDC50Q8IVM0 PHF10-206ENST00000621772 1651 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
CCDC50Q8IVM0 AL359915.2-202ENST00000440150 2469 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CCDC50Q8IVM0 RBM25-204ENST00000526754 1567 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CCDC50Q8IVM0 PCNX4-202ENST00000391611 4073 ntTSL 2 BASIC14.38□□□□□ -0.11
CCDC50Q8IVM0 BAIAP2-AS1-202ENST00000577066 4465 ntTSL 2 BASIC14.38□□□□□ -0.11
CCDC50Q8IVM0 FBN3-201ENST00000270509 9232 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CCDC50Q8IVM0 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
CCDC50Q8IVM0 GLIS3-202ENST00000381971 3961 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
CCDC50Q8IVM0 FAM86C1-202ENST00000359244 2110 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
CCDC50Q8IVM0 HNRNPH1-216ENST00000510411 2105 ntTSL 5 BASIC14.38□□□□□ -0.11
CCDC50Q8IVM0 CCDC97-201ENST00000269967 3322 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CCDC50Q8IVM0 C12orf66-201ENST00000311915 2698 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CCDC50Q8IVM0 SMG6-203ENST00000536871 1865 ntTSL 2 BASIC14.38□□□□□ -0.11
CCDC50Q8IVM0 RBP1-205ENST00000492918 1487 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CCDC50Q8IVM0 BSDC1-201ENST00000341071 4599 ntTSL 2 BASIC14.37□□□□□ -0.11
CCDC50Q8IVM0 GPATCH2L-202ENST00000312858 2438 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
CCDC50Q8IVM0 AC022364.1-202ENST00000617468 2409 ntBASIC14.37□□□□□ -0.11
CCDC50Q8IVM0 DCAF12L1-201ENST00000371126 3382 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CCDC50Q8IVM0 MDM1-205ENST00000430606 2170 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CCDC50Q8IVM0 SLC38A7-215ENST00000570101 4549 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CCDC50Q8IVM0 HERC3-203ENST00000407637 2634 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CCDC50Q8IVM0 SLC25A18-202ENST00000399813 2057 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CCDC50Q8IVM0 DTX1-201ENST00000257600 3455 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CCDC50Q8IVM0 ELN-234ENST00000621115 3452 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
CCDC50Q8IVM0 MYO9B-201ENST00000397274 7532 ntTSL 5 BASIC14.37□□□□□ -0.11
CCDC50Q8IVM0 PLEKHM1P1-202ENST00000578036 4318 ntTSL 2 BASIC14.37□□□□□ -0.11
CCDC50Q8IVM0 PCID2-205ENST00000375477 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CCDC50Q8IVM0 ZNF283-209ENST00000618787 5713 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
CCDC50Q8IVM0 AGAP6-202ENST00000412531 2372 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
CCDC50Q8IVM0 PCDHB17P-202ENST00000623466 3066 ntBASIC14.37□□□□□ -0.11
CCDC50Q8IVM0 FBN1-201ENST00000316623 11756 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CCDC50Q8IVM0 PDE5A-202ENST00000354960 7154 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
CCDC50Q8IVM0 TJAP1-205ENST00000372452 2665 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
CCDC50Q8IVM0 AL357140.3-201ENST00000639753 1983 ntBASIC14.37□□□□□ -0.11
CCDC50Q8IVM0 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC14.37□□□□□ -0.11
CCDC50Q8IVM0 OR1J1-201ENST00000259357 969 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
CCDC50Q8IVM0 HMGN3-201ENST00000275036 831 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CCDC50Q8IVM0 C2orf70-201ENST00000329615 731 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
CCDC50Q8IVM0 HMGN3-202ENST00000344726 872 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CCDC50Q8IVM0 AC106827.1-201ENST00000366454 431 ntBASIC14.37□□□□□ -0.11
CCDC50Q8IVM0 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
CCDC50Q8IVM0 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC14.37□□□□□ -0.11
CCDC50Q8IVM0 BANF1P3-201ENST00000412556 261 ntBASIC14.37□□□□□ -0.11
CCDC50Q8IVM0 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC14.37□□□□□ -0.11
CCDC50Q8IVM0 NAGK-204ENST00000443872 878 ntTSL 3 BASIC14.37□□□□□ -0.11
CCDC50Q8IVM0 GS1-124K5.4-201ENST00000445681 540 ntTSL 2 BASIC14.37□□□□□ -0.11
CCDC50Q8IVM0 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC14.37□□□□□ -0.11
CCDC50Q8IVM0 AL049833.2-202ENST00000556773 626 ntTSL 3 BASIC14.37□□□□□ -0.11
CCDC50Q8IVM0 AL136295.3-201ENST00000558325 850 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
CCDC50Q8IVM0 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC14.37□□□□□ -0.11
CCDC50Q8IVM0 AC023824.4-202ENST00000569557 849 ntTSL 3 BASIC14.37□□□□□ -0.11
CCDC50Q8IVM0 AC022001.2-201ENST00000607849 580 ntTSL 2 BASIC14.37□□□□□ -0.11
CCDC50Q8IVM0 LINC01783-202ENST00000614408 828 ntBASIC14.37□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 55.1 ms