Protein–RNA interactions for Protein: Q86US8

SMG6, Telomerase-binding protein EST1A, humanhuman

Known RBP Predictions only

Length 1,419 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6Q86US8 SMAD1-AS1-201ENST00000513542 481 ntTSL 2 BASIC18.27■□□□□ 0.52
SMG6Q86US8 AC113133.1-201ENST00000522388 1088 ntTSL 2 BASIC18.27■□□□□ 0.52
SMG6Q86US8 AC018845.3-201ENST00000562536 516 ntTSL 3 BASIC18.27■□□□□ 0.52
SMG6Q86US8 AC027139.1-201ENST00000565286 951 ntBASIC18.27■□□□□ 0.52
SMG6Q86US8 MIAT_exon5_3.1-201ENST00000613656 377 ntBASIC18.27■□□□□ 0.52
SMG6Q86US8 IDH3A-224ENST00000629769 114 ntTSL 5 BASIC18.27■□□□□ 0.52
SMG6Q86US8 DHX16-201ENST00000376437 1933 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
SMG6Q86US8 ERP29-202ENST00000455836 1333 ntTSL 2 BASIC18.27■□□□□ 0.52
SMG6Q86US8 SLC38A5-210ENST00000595796 2659 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SMG6Q86US8 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC18.27■□□□□ 0.52
SMG6Q86US8 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
SMG6Q86US8 ZBTB49-201ENST00000337872 2889 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SMG6Q86US8 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.51
SMG6Q86US8 C9orf170-201ENST00000623052 3239 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
SMG6Q86US8 CLCN7-203ENST00000448525 4151 ntTSL 2 BASIC18.27■□□□□ 0.51
SMG6Q86US8 PIK3R5-216ENST00000584803 2653 ntAPPRIS ALT1 TSL 5 BASIC18.27■□□□□ 0.51
SMG6Q86US8 VAPB-202ENST00000395802 1834 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
SMG6Q86US8 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
SMG6Q86US8 CHMP4C-201ENST00000297265 1866 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SMG6Q86US8 GLRX3-202ENST00000368644 3827 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
SMG6Q86US8 SLC26A8-202ENST00000394602 3144 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
SMG6Q86US8 C16orf62-215ENST00000542263 3138 ntTSL 2 BASIC18.26■□□□□ 0.51
SMG6Q86US8 SCARB2-227ENST00000640957 3255 ntAPPRIS ALT1 TSL 5 BASIC18.26■□□□□ 0.51
SMG6Q86US8 POLL-202ENST00000339310 2289 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
SMG6Q86US8 C17orf80-202ENST00000268942 3449 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
SMG6Q86US8 GUCY1B3-204ENST00000505154 2316 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
SMG6Q86US8 KRTAP6-1-201ENST00000329122 500 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
SMG6Q86US8 AC025594.1-201ENST00000469533 543 ntBASIC18.26■□□□□ 0.51
SMG6Q86US8 AP003168.2-201ENST00000531215 471 ntTSL 3 BASIC18.26■□□□□ 0.51
SMG6Q86US8 AP000866.5-201ENST00000531241 445 ntTSL 5 BASIC18.26■□□□□ 0.51
SMG6Q86US8 HNRNPA1P16-201ENST00000575692 955 ntBASIC18.26■□□□□ 0.51
SMG6Q86US8 NAA38-205ENST00000575771 852 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SMG6Q86US8 KF455155.1-201ENST00000604493 303 ntBASIC18.26■□□□□ 0.51
SMG6Q86US8 MEP1AP1-201ENST00000636082 1097 ntBASIC18.26■□□□□ 0.51
SMG6Q86US8 ARHGEF26-202ENST00000465093 3929 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SMG6Q86US8 KIAA0895-203ENST00000338533 4132 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
SMG6Q86US8 SGCA-201ENST00000262018 1432 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SMG6Q86US8 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SMG6Q86US8 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SMG6Q86US8 DMC1-207ENST00000616615 1595 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
SMG6Q86US8 SDC1-202ENST00000381150 3291 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
SMG6Q86US8 POLD1-210ENST00000599857 3435 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SMG6Q86US8 SLC5A11-211ENST00000569071 1919 ntTSL 5 BASIC18.26■□□□□ 0.51
SMG6Q86US8 LINC01744-201ENST00000457698 2042 ntTSL 2 BASIC18.26■□□□□ 0.51
SMG6Q86US8 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SMG6Q86US8 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC18.26■□□□□ 0.51
SMG6Q86US8 GTF2F1-201ENST00000394456 2731 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SMG6Q86US8 SLC39A6-204ENST00000590986 3003 ntAPPRIS P3 TSL 5 BASIC18.26■□□□□ 0.51
SMG6Q86US8 NDRG4-255ENST00000570248 3207 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
SMG6Q86US8 NINL-203ENST00000422516 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
SMG6Q86US8 ISY1-RAB43-201ENST00000418265 4868 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
SMG6Q86US8 DAD1-201ENST00000250498 731 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SMG6Q86US8 WIPI1-201ENST00000262139 1832 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SMG6Q86US8 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
SMG6Q86US8 FAHD2B-201ENST00000272610 1305 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SMG6Q86US8 HIGD2A-201ENST00000274787 668 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SMG6Q86US8 FMC1-201ENST00000297534 1210 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SMG6Q86US8 RNASE7-201ENST00000298690 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SMG6Q86US8 HTR3D-201ENST00000334128 1459 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
SMG6Q86US8 GHITM-201ENST00000372134 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SMG6Q86US8 TMEM95-202ENST00000389982 1191 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
SMG6Q86US8 PAX8-204ENST00000397647 3633 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
SMG6Q86US8 STAMBP-204ENST00000409707 1649 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
SMG6Q86US8 OR7E155P-201ENST00000412208 1014 ntBASIC18.25■□□□□ 0.51
SMG6Q86US8 AL357079.1-203ENST00000412378 494 ntTSL 5 BASIC18.25■□□□□ 0.51
SMG6Q86US8 AC064850.1-201ENST00000413279 1398 ntBASIC18.25■□□□□ 0.51
SMG6Q86US8 DDX39B-AS1-208ENST00000420520 516 ntTSL 3 BASIC18.25■□□□□ 0.51
SMG6Q86US8 MKNK1-205ENST00000428112 1270 ntAPPRIS P3 TSL 2 BASIC18.25■□□□□ 0.51
SMG6Q86US8 AC087741.1-204ENST00000573935 646 ntTSL 3 BASIC18.25■□□□□ 0.51
SMG6Q86US8 RN7SL605P-201ENST00000577229 281 ntBASIC18.25■□□□□ 0.51
SMG6Q86US8 CRABP2-204ENST00000621784 1033 ntAPPRIS P1 TSL 3 BASIC18.25■□□□□ 0.51
SMG6Q86US8 AL590094.1-208ENST00000636917 627 ntTSL 5 BASIC18.25■□□□□ 0.51
SMG6Q86US8 AL807740.1-201ENST00000636971 567 ntTSL 4 BASIC18.25■□□□□ 0.51
SMG6Q86US8 TBC1D2-204ENST00000375066 3198 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
SMG6Q86US8 UBE2I-204ENST00000397515 3109 ntAPPRIS P1 TSL 3 BASIC18.25■□□□□ 0.51
SMG6Q86US8 AL118506.1-201ENST00000601296 3082 ntBASIC18.25■□□□□ 0.51
SMG6Q86US8 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
SMG6Q86US8 BCAS3-221ENST00000588874 2948 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
SMG6Q86US8 PABPC1-208ENST00000519004 2401 ntTSL 2 BASIC18.25■□□□□ 0.51
SMG6Q86US8 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SMG6Q86US8 SLC5A9-210ENST00000533824 2219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
SMG6Q86US8 AC107375.1-201ENST00000564464 2231 ntBASIC18.25■□□□□ 0.51
SMG6Q86US8 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SMG6Q86US8 TUBB8P7-202ENST00000564451 2115 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
SMG6Q86US8 ITFG1-204ENST00000544001 1849 ntTSL 2 BASIC18.25■□□□□ 0.51
SMG6Q86US8 SHC1-202ENST00000368445 3472 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SMG6Q86US8 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SMG6Q86US8 CTTN-201ENST00000301843 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
SMG6Q86US8 PSMC3IP-201ENST00000253789 1408 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
SMG6Q86US8 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SMG6Q86US8 FBXO21-202ENST00000427718 4138 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
SMG6Q86US8 HIST1H1D-201ENST00000244534 666 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
SMG6Q86US8 C6orf48-202ENST00000375635 610 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
SMG6Q86US8 C6orf48-209ENST00000395789 952 ntAPPRIS P1 TSL 3 BASIC18.24■□□□□ 0.51
SMG6Q86US8 KRTAP10-9-201ENST00000397911 1171 ntAPPRIS P2 BASIC18.24■□□□□ 0.51
SMG6Q86US8 MPV17-207ENST00000403262 665 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
SMG6Q86US8 AL513165.1-201ENST00000413915 289 ntTSL 3 BASIC18.24■□□□□ 0.51
SMG6Q86US8 LINC02026-202ENST00000414309 772 ntTSL 3 BASIC18.24■□□□□ 0.51
SMG6Q86US8 FAM27E5-201ENST00000426869 682 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
SMG6Q86US8 RPSAP12-201ENST00000435879 888 ntBASIC18.24■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 53.2 ms