Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 LINC02507-201ENST00000509370 1028 ntTSL 3 BASIC19.55■□□□□ 0.72
CDC42BPAQ5VT25 AC011456.1-201ENST00000592270 536 ntTSL 4 BASIC19.55■□□□□ 0.72
CDC42BPAQ5VT25 RPA2-203ENST00000373912 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CDC42BPAQ5VT25 A1CF-204ENST00000373997 2116 ntAPPRIS ALT1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CDC42BPAQ5VT25 CYP51A1-AS1-201ENST00000453068 2957 ntTSL 5 BASIC19.55■□□□□ 0.72
CDC42BPAQ5VT25 ENTPD3-204ENST00000456402 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CDC42BPAQ5VT25 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
CDC42BPAQ5VT25 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
CDC42BPAQ5VT25 PRKCSH-212ENST00000591462 2209 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
CDC42BPAQ5VT25 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC19.55■□□□□ 0.72
CDC42BPAQ5VT25 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CDC42BPAQ5VT25 GIT1-211ENST00000581348 2827 ntAPPRIS ALT2 TSL 2 BASIC19.55■□□□□ 0.72
CDC42BPAQ5VT25 TMEM101-205ENST00000589334 1830 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
CDC42BPAQ5VT25 BISPR-204ENST00000634675 1806 ntTSL 2 BASIC19.54■□□□□ 0.72
CDC42BPAQ5VT25 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
CDC42BPAQ5VT25 PIGG-217ENST00000509768 3121 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CDC42BPAQ5VT25 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC19.54■□□□□ 0.72
CDC42BPAQ5VT25 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC19.54■□□□□ 0.72
CDC42BPAQ5VT25 UCK1-202ENST00000372210 2051 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CDC42BPAQ5VT25 HIST1H1C-201ENST00000343677 642 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
CDC42BPAQ5VT25 TIMM23B-201ENST00000374098 1142 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
CDC42BPAQ5VT25 FAM45BP-201ENST00000408950 1074 ntBASIC19.54■□□□□ 0.72
CDC42BPAQ5VT25 MLN-202ENST00000430124 566 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CDC42BPAQ5VT25 LINC00106-201ENST00000430235 370 ntTSL 2 BASIC19.54■□□□□ 0.72
CDC42BPAQ5VT25 LINC00332-201ENST00000455241 834 ntTSL 3 BASIC19.54■□□□□ 0.72
CDC42BPAQ5VT25 EEF1GP1-201ENST00000457231 1299 ntBASIC19.54■□□□□ 0.72
CDC42BPAQ5VT25 AC009119.3-202ENST00000566773 196 ntTSL 3 BASIC19.54■□□□□ 0.72
CDC42BPAQ5VT25 IKBKE-202ENST00000579827 678 ntTSL 2 BASIC19.54■□□□□ 0.72
CDC42BPAQ5VT25 MIR4687-201ENST00000583618 80 ntBASIC19.54■□□□□ 0.72
CDC42BPAQ5VT25 AL137028.1-201ENST00000620521 555 ntBASIC19.54■□□□□ 0.72
CDC42BPAQ5VT25 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
CDC42BPAQ5VT25 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
CDC42BPAQ5VT25 UCKL1-AS1-201ENST00000623569 3602 ntBASIC19.54■□□□□ 0.72
CDC42BPAQ5VT25 LINC02125-201ENST00000512279 2198 ntTSL 2 BASIC19.54■□□□□ 0.72
CDC42BPAQ5VT25 LDLRAD4-AS1-201ENST00000588672 2190 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CDC42BPAQ5VT25 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CDC42BPAQ5VT25 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CDC42BPAQ5VT25 MAP2K3-203ENST00000361818 2034 ntTSL 5 BASIC19.54■□□□□ 0.72
CDC42BPAQ5VT25 CHRDL2-201ENST00000263671 1712 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
CDC42BPAQ5VT25 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CDC42BPAQ5VT25 SERPINE3-203ENST00000521255 1439 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CDC42BPAQ5VT25 IGLV3-21-201ENST00000390308 602 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
CDC42BPAQ5VT25 AC096677.3-201ENST00000413162 387 ntBASIC19.54■□□□□ 0.72
CDC42BPAQ5VT25 CNBP-202ENST00000441626 1040 ntTSL 2 BASIC19.54■□□□□ 0.72
CDC42BPAQ5VT25 LINC01297-202ENST00000453395 624 ntTSL 5 BASIC19.54■□□□□ 0.72
CDC42BPAQ5VT25 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CDC42BPAQ5VT25 AC019254.1-202ENST00000558515 645 ntTSL 3 BASIC19.54■□□□□ 0.72
CDC42BPAQ5VT25 MT1G-204ENST00000569500 305 ntTSL 3 BASIC19.54■□□□□ 0.72
CDC42BPAQ5VT25 AC015911.7-201ENST00000587542 958 ntBASIC19.54■□□□□ 0.72
CDC42BPAQ5VT25 PSME3-213ENST00000592169 826 ntTSL 3 BASIC19.54■□□□□ 0.72
CDC42BPAQ5VT25 AL133551.1-201ENST00000610279 1222 ntBASIC19.54■□□□□ 0.72
CDC42BPAQ5VT25 DMTN-214ENST00000519907 2658 ntTSL 5 BASIC19.53■□□□□ 0.72
CDC42BPAQ5VT25 BHLHE40-AS1-204ENST00000620618 2355 ntTSL 2 BASIC19.53■□□□□ 0.72
CDC42BPAQ5VT25 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CDC42BPAQ5VT25 LILRA4-201ENST00000291759 1944 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
CDC42BPAQ5VT25 FMR1-220ENST00000621987 1352 ntTSL 5 BASIC19.53■□□□□ 0.72
CDC42BPAQ5VT25 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
CDC42BPAQ5VT25 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CDC42BPAQ5VT25 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC19.53■□□□□ 0.72
CDC42BPAQ5VT25 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC19.53■□□□□ 0.72
CDC42BPAQ5VT25 HINFP-204ENST00000527410 1466 ntTSL 2 BASIC19.53■□□□□ 0.72
CDC42BPAQ5VT25 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC19.53■□□□□ 0.72
CDC42BPAQ5VT25 NFIX-201ENST00000358552 1727 ntTSL 5 BASIC19.53■□□□□ 0.72
CDC42BPAQ5VT25 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
CDC42BPAQ5VT25 MAPT-IT1-201ENST00000624111 3016 ntBASIC19.53■□□□□ 0.72
CDC42BPAQ5VT25 SCYL1-205ENST00000524944 2715 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CDC42BPAQ5VT25 SH2D2A-203ENST00000392306 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
CDC42BPAQ5VT25 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC19.53■□□□□ 0.72
CDC42BPAQ5VT25 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC19.53■□□□□ 0.72
CDC42BPAQ5VT25 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC19.53■□□□□ 0.72
CDC42BPAQ5VT25 PRAME-202ENST00000398743 2196 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
CDC42BPAQ5VT25 AC000078.1-201ENST00000420617 682 ntBASIC19.53■□□□□ 0.72
CDC42BPAQ5VT25 AL121761.1-203ENST00000426012 677 ntTSL 3 BASIC19.53■□□□□ 0.72
CDC42BPAQ5VT25 DEFA8P-201ENST00000457582 285 ntBASIC19.53■□□□□ 0.72
CDC42BPAQ5VT25 LINC00877-202ENST00000464271 552 ntTSL 4 BASIC19.53■□□□□ 0.72
CDC42BPAQ5VT25 AC089987.3-201ENST00000551847 588 ntTSL 4 BASIC19.53■□□□□ 0.72
CDC42BPAQ5VT25 AL121790.2-201ENST00000553425 379 ntTSL 4 BASIC19.53■□□□□ 0.72
CDC42BPAQ5VT25 AC005336.1-201ENST00000585431 1243 ntBASIC19.53■□□□□ 0.72
CDC42BPAQ5VT25 UBA52-213ENST00000599551 707 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
CDC42BPAQ5VT25 AC078880.3-201ENST00000603439 1121 ntBASIC19.53■□□□□ 0.72
CDC42BPAQ5VT25 GH2-205ENST00000622506 702 ntTSL 5 BASIC19.53■□□□□ 0.72
CDC42BPAQ5VT25 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC19.53■□□□□ 0.72
CDC42BPAQ5VT25 CPEB1-212ENST00000616959 2009 ntTSL 2 BASIC19.53■□□□□ 0.72
CDC42BPAQ5VT25 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
CDC42BPAQ5VT25 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
CDC42BPAQ5VT25 ACTG1-216ENST00000615544 1723 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CDC42BPAQ5VT25 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CDC42BPAQ5VT25 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC19.53■□□□□ 0.72
CDC42BPAQ5VT25 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CDC42BPAQ5VT25 LINC00523-206ENST00000556697 2071 ntTSL 2 BASIC19.52■□□□□ 0.72
CDC42BPAQ5VT25 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
CDC42BPAQ5VT25 ANKRD20A7P-201ENST00000402318 2414 ntBASIC19.52■□□□□ 0.72
CDC42BPAQ5VT25 THEMIS3P-201ENST00000416112 1586 ntBASIC19.52■□□□□ 0.72
CDC42BPAQ5VT25 GHRL-201ENST00000287656 1313 ntAPPRIS ALT1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CDC42BPAQ5VT25 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC19.52■□□□□ 0.72
CDC42BPAQ5VT25 AP3M2-207ENST00000518421 3669 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CDC42BPAQ5VT25 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CDC42BPAQ5VT25 PTAFR-201ENST00000305392 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CDC42BPAQ5VT25 FHOD3-207ENST00000591635 3035 ntTSL 5 BASIC19.52■□□□□ 0.72
CDC42BPAQ5VT25 KIR2DL1-201ENST00000291633 1203 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms