Protein–RNA interactions for Protein: P48960

CD97, CD97 antigen, humanhuman

Predictions only

Length 835 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD97P48960 FAM90A15P-201ENST00000514465 1395 ntBASIC13.15□□□□□ -0.3
CD97P48960 FAM90A6P-201ENST00000515148 1394 ntBASIC13.15□□□□□ -0.3
CD97P48960 FAM90A16P-201ENST00000526662 1395 ntBASIC13.15□□□□□ -0.3
CD97P48960 FAM90A9P-201ENST00000527940 1395 ntBASIC13.15□□□□□ -0.3
CD97P48960 FAM90A5P-201ENST00000528738 1395 ntBASIC13.15□□□□□ -0.3
CD97P48960 FAM90A14P-201ENST00000530386 1395 ntBASIC13.15□□□□□ -0.3
CD97P48960 FAM90A13P-201ENST00000534703 1395 ntBASIC13.15□□□□□ -0.3
CD97P48960 ATP2C1-221ENST00000513801 3439 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CD97P48960 PGAP2-202ENST00000300730 1843 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CD97P48960 BCDIN3D-AS1-201ENST00000548872 3078 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CD97P48960 SERPINH1-205ENST00000525876 2283 ntTSL 2 BASIC13.15□□□□□ -0.3
CD97P48960 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CD97P48960 UBL4B-201ENST00000334179 1478 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
CD97P48960 CACNA2D1-202ENST00000356860 7563 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CD97P48960 TMEM245-201ENST00000374586 7980 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CD97P48960 KLHL9-201ENST00000359039 5710 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
CD97P48960 MBP-205ENST00000397860 4844 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CD97P48960 CNBP-201ENST00000422453 1664 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.31
CD97P48960 ABI2-215ENST00000430418 1676 ntTSL 5 BASIC13.15□□□□□ -0.31
CD97P48960 PRKCG-201ENST00000263431 3133 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
CD97P48960 FEM1A-201ENST00000269856 9593 ntAPPRIS P1 BASIC13.15□□□□□ -0.31
CD97P48960 DACH2-201ENST00000373125 2232 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.31
CD97P48960 CCDC114-201ENST00000315396 3215 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
CD97P48960 SLC7A8-205ENST00000453702 1752 ntTSL 1 (best) BASIC13.15□□□□□ -0.31
CD97P48960 LINC00893-215ENST00000618757 2347 ntTSL 2 BASIC13.14□□□□□ -0.31
CD97P48960 AC011287.1-201ENST00000639998 1349 ntTSL 5 BASIC13.14□□□□□ -0.31
CD97P48960 AMOTL2-212ENST00000514516 4521 ntTSL 2 BASIC13.14□□□□□ -0.31
CD97P48960 GTF3C2-214ENST00000622534 1858 ntTSL 5 BASIC13.14□□□□□ -0.31
CD97P48960 EDEM3-202ENST00000367512 6678 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
CD97P48960 FBN3-207ENST00000601739 9086 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CD97P48960 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CD97P48960 C9orf3-202ENST00000297979 2820 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CD97P48960 DPP8-204ENST00000358939 2822 ntTSL 2 BASIC13.14□□□□□ -0.31
CD97P48960 SLC35E2B-205ENST00000617444 6283 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CD97P48960 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CD97P48960 GLIS3-201ENST00000324333 6667 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CD97P48960 PFAS-201ENST00000314666 5371 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CD97P48960 SGTB-201ENST00000381007 5469 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CD97P48960 VCP-201ENST00000358901 4370 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CD97P48960 SPIN3-207ENST00000638386 4461 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
CD97P48960 COX20P1-201ENST00000366529 357 ntBASIC13.14□□□□□ -0.31
CD97P48960 C11orf49-203ENST00000378618 1166 ntTSL 5 BASIC13.14□□□□□ -0.31
CD97P48960 KLK11-203ENST00000391804 930 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
CD97P48960 STK16-203ENST00000409516 895 ntTSL 2 BASIC13.14□□□□□ -0.31
CD97P48960 RN7SKP109-201ENST00000410592 316 ntBASIC13.14□□□□□ -0.31
CD97P48960 AC156455.1-203ENST00000423999 893 ntTSL 2 BASIC13.14□□□□□ -0.31
CD97P48960 RPL35P9-201ENST00000446059 350 ntBASIC13.14□□□□□ -0.31
CD97P48960 PRRC2B-207ENST00000458550 899 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CD97P48960 TMEM222-204ENST00000466759 368 ntTSL 3 BASIC13.14□□□□□ -0.31
CD97P48960 FRMD4A-208ENST00000493380 1149 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CD97P48960 FXYD6-FXYD2-201ENST00000532984 670 ntTSL 3 BASIC13.14□□□□□ -0.31
CD97P48960 TMEM14C-205ENST00000541412 1177 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
CD97P48960 SNHG21-204ENST00000559366 674 ntTSL 2 BASIC13.14□□□□□ -0.31
CD97P48960 AC135782.2-201ENST00000562040 472 ntTSL 3 BASIC13.14□□□□□ -0.31
CD97P48960 AC007952.4-201ENST00000573866 637 ntBASIC13.14□□□□□ -0.31
CD97P48960 SNHG25-202ENST00000582965 278 ntTSL 2 BASIC13.14□□□□□ -0.31
CD97P48960 AC055811.3-201ENST00000584952 686 ntBASIC13.14□□□□□ -0.31
CD97P48960 NAMA-206ENST00000605377 509 ntTSL 5 BASIC13.14□□□□□ -0.31
CD97P48960 EAF1-AS1-208ENST00000608408 770 ntTSL 5 BASIC13.14□□□□□ -0.31
CD97P48960 CFAP46-202ENST00000368586 8278 ntAPPRIS P2 TSL 5 BASIC13.14□□□□□ -0.31
CD97P48960 PARN-203ENST00000437198 3078 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CD97P48960 BCCIP-202ENST00000299130 2337 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CD97P48960 AC020910.6-201ENST00000623084 1459 ntBASIC13.14□□□□□ -0.31
CD97P48960 LHX6-204ENST00000394319 3465 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CD97P48960 USP3-204ENST00000540797 5474 ntTSL 2 BASIC13.14□□□□□ -0.31
CD97P48960 PRKAB1-201ENST00000229328 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CD97P48960 NACC2-202ENST00000371753 6802 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CD97P48960 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
CD97P48960 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
CD97P48960 LSINCT5-201ENST00000626215 2647 ntBASIC13.14□□□□□ -0.31
CD97P48960 NIPAL3-202ENST00000339255 1676 ntTSL 5 BASIC13.14□□□□□ -0.31
CD97P48960 PTPRK-204ENST00000368210 5025 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
CD97P48960 PSAP-201ENST00000394934 2830 ntAPPRIS ALT1 TSL 5 BASIC13.14□□□□□ -0.31
CD97P48960 GLIS3-202ENST00000381971 3961 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
CD97P48960 PLOD3-201ENST00000223127 2920 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
CD97P48960 ZNF197-204ENST00000383745 2935 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CD97P48960 SATB2-201ENST00000260926 5318 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CD97P48960 DISC1-221ENST00000620189 6689 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
CD97P48960 NOL9-201ENST00000377705 6649 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CD97P48960 ZMYND15-206ENST00000592813 2274 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CD97P48960 CCNC-210ENST00000520429 2473 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
CD97P48960 LPP-AS2-201ENST00000605573 2852 ntBASIC13.14□□□□□ -0.31
CD97P48960 DNAH2-202ENST00000570791 2994 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CD97P48960 NUP153-203ENST00000613258 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
CD97P48960 TNFRSF1A-202ENST00000366159 1339 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CD97P48960 LGALS12-202ENST00000340246 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
CD97P48960 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
CD97P48960 ANKDD1A-202ENST00000395720 1518 ntTSL 5 BASIC13.13□□□□□ -0.31
CD97P48960 PGAP2-227ENST00000496834 1530 ntTSL 2 BASIC13.13□□□□□ -0.31
CD97P48960 AC138761.4-201ENST00000578881 1514 ntTSL 3 BASIC13.13□□□□□ -0.31
CD97P48960 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CD97P48960 PGRMC1-201ENST00000217971 1911 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CD97P48960 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
CD97P48960 AC082651.3-201ENST00000474667 1947 ntTSL 2 BASIC13.13□□□□□ -0.31
CD97P48960 NRG1-201ENST00000287842 2035 ntAPPRIS P4 TSL 1 (best) BASIC13.13□□□□□ -0.31
CD97P48960 MTMR11-201ENST00000369140 2324 ntAPPRIS ALT2 TSL 2 BASIC13.13□□□□□ -0.31
CD97P48960 ZNF436-AS1-201ENST00000335648 2547 ntBASIC13.13□□□□□ -0.31
CD97P48960 SAP30BP-225ENST00000584667 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CD97P48960 SPCS2-209ENST00000610881 2711 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
CD97P48960 AMOTL2-202ENST00000422605 4335 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 73.4 ms