Protein–RNA interactions for Protein: P45452

MMP13, Collagenase 3, humanhuman

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP13P45452 IL9RP3-201ENST00000442856 1674 ntBASIC14.1□□□□□ -0.15
MMP13P45452 INCENP-202ENST00000394818 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
MMP13P45452 HNRNPDL-207ENST00000614627 3968 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
MMP13P45452 UBE2I-202ENST00000355803 3253 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
MMP13P45452 EPS15L1-202ENST00000455140 3266 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
MMP13P45452 YIPF1-201ENST00000072644 1858 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
MMP13P45452 TMEM30A-203ENST00000475111 2791 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
MMP13P45452 KLKP1-203ENST00000600104 1532 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
MMP13P45452 PAM-203ENST00000346918 3302 ntTSL 5 BASIC14.1□□□□□ -0.15
MMP13P45452 RAB44-202ENST00000612677 4233 ntAPPRIS P2 TSL 5 BASIC14.1□□□□□ -0.15
MMP13P45452 SFRP1-202ENST00000379845 3873 ntTSL 2 BASIC14.1□□□□□ -0.15
MMP13P45452 DCAF13-201ENST00000297579 2642 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
MMP13P45452 ENTPD3-204ENST00000456402 1749 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
MMP13P45452 DHX16-201ENST00000376437 1933 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
MMP13P45452 RUFY1-202ENST00000393438 2454 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
MMP13P45452 SERPINB9P1-202ENST00000545177 1375 ntTSL 3 BASIC14.09□□□□□ -0.15
MMP13P45452 NME7-203ENST00000472647 1590 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
MMP13P45452 RBM25-204ENST00000526754 1567 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
MMP13P45452 DDX46-212ENST00000628477 1584 ntTSL 5 BASIC14.09□□□□□ -0.15
MMP13P45452 ARAP1-201ENST00000334211 4942 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
MMP13P45452 USB1-207ENST00000563149 1751 ntTSL 2 BASIC14.09□□□□□ -0.15
MMP13P45452 NCOA7-203ENST00000392477 6457 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
MMP13P45452 STAM2-201ENST00000263904 5701 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
MMP13P45452 CCNE2-201ENST00000308108 2724 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
MMP13P45452 KCNIP3-201ENST00000295225 2940 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
MMP13P45452 SLC38A7-201ENST00000219320 4392 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
MMP13P45452 MRPS16-202ENST00000372945 2634 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
MMP13P45452 RIDA-201ENST00000254878 1057 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
MMP13P45452 PDLIM5-203ENST00000359265 1189 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
MMP13P45452 SOD2-202ENST00000367054 815 ntTSL 2 BASIC14.09□□□□□ -0.15
MMP13P45452 GAD1-203ENST00000375272 1252 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
MMP13P45452 UPK1A-202ENST00000379013 1016 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
MMP13P45452 TMSB4X-202ENST00000380635 767 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
MMP13P45452 CIDEC-202ENST00000383817 1199 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
MMP13P45452 HLA-DMA-203ENST00000395305 777 ntBASIC14.09□□□□□ -0.15
MMP13P45452 GUSBP10-201ENST00000417412 665 ntBASIC14.09□□□□□ -0.15
MMP13P45452 PSMA1-202ENST00000418988 1266 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
MMP13P45452 AL606489.1-201ENST00000443515 486 ntTSL 3 BASIC14.09□□□□□ -0.15
MMP13P45452 RN7SL564P-201ENST00000496309 250 ntBASIC14.09□□□□□ -0.15
MMP13P45452 HERC2P11-201ENST00000562845 725 ntBASIC14.09□□□□□ -0.15
MMP13P45452 AC100756.2-201ENST00000569537 736 ntBASIC14.09□□□□□ -0.15
MMP13P45452 GEMIN7-204ENST00000591747 576 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
MMP13P45452 AC008982.2-201ENST00000600473 493 ntTSL 5 BASIC14.09□□□□□ -0.15
MMP13P45452 AL356417.2-202ENST00000608986 532 ntTSL 3 BASIC14.09□□□□□ -0.15
MMP13P45452 AL359091.4-201ENST00000610052 409 ntBASIC14.09□□□□□ -0.15
MMP13P45452 AC103691.2-201ENST00000618824 433 ntBASIC14.09□□□□□ -0.15
MMP13P45452 AC091769.1-201ENST00000619576 568 ntBASIC14.09□□□□□ -0.15
MMP13P45452 AP001184.1-201ENST00000637936 376 ntBASIC14.09□□□□□ -0.15
MMP13P45452 EIF3F-209ENST00000640290 372 ntTSL 5 BASIC14.09□□□□□ -0.15
MMP13P45452 CELF4-217ENST00000591282 1461 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
MMP13P45452 CHMP4C-201ENST00000297265 1866 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
MMP13P45452 AC000068.1-201ENST00000431090 2097 ntTSL 2 BASIC14.09□□□□□ -0.15
MMP13P45452 AC138150.2-201ENST00000589796 2053 ntTSL 2 BASIC14.09□□□□□ -0.15
MMP13P45452 BAIAP2-202ENST00000321300 2879 ntAPPRIS P4 TSL 1 (best) BASIC14.09□□□□□ -0.15
MMP13P45452 INCENP-201ENST00000278849 3698 ntAPPRIS P3 TSL 5 BASIC14.09□□□□□ -0.15
MMP13P45452 SIX4-201ENST00000216513 6285 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
MMP13P45452 PDZRN3-205ENST00000466780 2737 ntTSL 2 BASIC14.09□□□□□ -0.15
MMP13P45452 ENDOV-203ENST00000517795 2548 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
MMP13P45452 HPSE2-202ENST00000370549 2121 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
MMP13P45452 PRTFDC1-201ENST00000320152 1944 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
MMP13P45452 PRKACB-205ENST00000370688 1905 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
MMP13P45452 MINDY1-205ENST00000493834 1546 ntTSL 2 BASIC14.09□□□□□ -0.15
MMP13P45452 ABCA17P-202ENST00000469908 4188 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
MMP13P45452 RHOG-201ENST00000351018 1319 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
MMP13P45452 ZSCAN32-202ENST00000396846 3173 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
MMP13P45452 MAN2C1-242ENST00000569482 3177 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
MMP13P45452 MYBBP1A-201ENST00000254718 4807 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
MMP13P45452 TSN-201ENST00000389682 3420 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
MMP13P45452 ZFYVE19-202ENST00000336455 1784 ntTSL 2 BASIC14.09□□□□□ -0.15
MMP13P45452 FTX-216ENST00000638985 1367 ntTSL 5 BASIC14.09□□□□□ -0.15
MMP13P45452 MARCH10-201ENST00000311269 3090 ntAPPRIS P3 TSL 2 BASIC14.09□□□□□ -0.15
MMP13P45452 EDN1-201ENST00000379375 2033 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
MMP13P45452 USP22-201ENST00000261497 5220 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.15
MMP13P45452 ELMOD3-206ENST00000409890 2492 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.15
MMP13P45452 ALKBH5-201ENST00000399138 2748 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.15
MMP13P45452 SOAT1-204ENST00000540564 6861 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
MMP13P45452 AC091181.1-201ENST00000623762 2098 ntBASIC14.08□□□□□ -0.15
MMP13P45452 MTUS1-204ENST00000381869 6256 ntTSL 5 BASIC14.08□□□□□ -0.16
MMP13P45452 C17orf80-202ENST00000268942 3449 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
MMP13P45452 ORMDL2-201ENST00000243045 2141 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
MMP13P45452 SH3TC1-201ENST00000245105 4226 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
MMP13P45452 MKL1-211ENST00000618196 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
MMP13P45452 SLC13A4-201ENST00000354042 2897 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
MMP13P45452 TRPM5-203ENST00000533060 3562 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
MMP13P45452 Metazoa_SRP.4-201ENST00000366232 298 ntBASIC14.08□□□□□ -0.16
MMP13P45452 CSAG1-203ENST00000370291 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
MMP13P45452 AC026316.1-201ENST00000398900 414 ntBASIC14.08□□□□□ -0.16
MMP13P45452 GGTLC4P-201ENST00000402176 664 ntBASIC14.08□□□□□ -0.16
MMP13P45452 OR2W2P-201ENST00000406313 909 ntBASIC14.08□□□□□ -0.16
MMP13P45452 AL118508.1-202ENST00000411595 709 ntTSL 2 BASIC14.08□□□□□ -0.16
MMP13P45452 AC007731.4-201ENST00000420225 652 ntTSL 2 BASIC14.08□□□□□ -0.16
MMP13P45452 OAZ3-203ENST00000453029 729 ntTSL 5 BASIC14.08□□□□□ -0.16
MMP13P45452 TXNRD2-206ENST00000462330 1129 ntTSL 3 BASIC14.08□□□□□ -0.16
MMP13P45452 HOXB-AS3-209ENST00000477144 743 ntTSL 5 BASIC14.08□□□□□ -0.16
MMP13P45452 SRSF10-211ENST00000484146 1089 ntTSL 2 BASIC14.08□□□□□ -0.16
MMP13P45452 AC074194.1-201ENST00000505025 622 ntTSL 4 BASIC14.08□□□□□ -0.16
MMP13P45452 LINC00461-207ENST00000506978 564 ntTSL 5 BASIC14.08□□□□□ -0.16
MMP13P45452 AC105254.1-201ENST00000507782 621 ntTSL 4 BASIC14.08□□□□□ -0.16
MMP13P45452 AC012073.1-201ENST00000606114 1108 ntBASIC14.08□□□□□ -0.16
MMP13P45452 Metazoa_SRP.65-201ENST00000615602 264 ntBASIC14.08□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms