Protein–RNA interactions for Protein: P35913

PDE6B, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, humanhuman

Predictions only

Length 854 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6BP35913 AC009061.2-202ENST00000602596 696 ntTSL 2 BASIC16.43■□□□□ 0.22
PDE6BP35913 AL161937.2-201ENST00000615503 403 ntTSL 2 BASIC16.43■□□□□ 0.22
PDE6BP35913 AC127002.1-201ENST00000619123 455 ntBASIC16.43■□□□□ 0.22
PDE6BP35913 SRP19-208ENST00000621420 1270 ntTSL 3 BASIC16.43■□□□□ 0.22
PDE6BP35913 AC112702.1-201ENST00000623712 366 ntBASIC16.43■□□□□ 0.22
PDE6BP35913 AL139823.1-201ENST00000641871 1225 ntBASIC16.43■□□□□ 0.22
PDE6BP35913 CD6-201ENST00000313421 3252 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
PDE6BP35913 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC16.43■□□□□ 0.22
PDE6BP35913 GTF2F2-201ENST00000340473 2239 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PDE6BP35913 ARID3B-206ENST00000622429 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
PDE6BP35913 KIF3C-202ENST00000405914 3180 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
PDE6BP35913 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC16.43■□□□□ 0.22
PDE6BP35913 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
PDE6BP35913 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
PDE6BP35913 GGPS1-203ENST00000391855 1407 ntTSL 2 BASIC16.43■□□□□ 0.22
PDE6BP35913 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
PDE6BP35913 Z97653.2-201ENST00000623057 1418 ntBASIC16.43■□□□□ 0.22
PDE6BP35913 GMPR2-206ENST00000557854 2025 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
PDE6BP35913 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
PDE6BP35913 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
PDE6BP35913 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC16.43■□□□□ 0.22
PDE6BP35913 DEGS1-202ENST00000391877 1345 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
PDE6BP35913 ZBP1-201ENST00000371173 2195 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
PDE6BP35913 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
PDE6BP35913 USP8-219ENST00000625664 1568 ntTSL 5 BASIC16.43■□□□□ 0.22
PDE6BP35913 GLDC-216ENST00000639639 1559 ntTSL 3 BASIC16.43■□□□□ 0.22
PDE6BP35913 CALU-202ENST00000449187 2438 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PDE6BP35913 CXorf40A-212ENST00000514208 1840 ntAPPRIS ALT1 TSL 5 BASIC16.42■□□□□ 0.22
PDE6BP35913 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
PDE6BP35913 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
PDE6BP35913 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PDE6BP35913 NAMA-207ENST00000605707 1748 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
PDE6BP35913 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PDE6BP35913 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC16.42■□□□□ 0.22
PDE6BP35913 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC16.42■□□□□ 0.22
PDE6BP35913 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
PDE6BP35913 KATNAL1-202ENST00000380617 1634 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
PDE6BP35913 SLC25A30-207ENST00000539591 3608 ntTSL 2 BASIC16.42■□□□□ 0.22
PDE6BP35913 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PDE6BP35913 AC091807.1-201ENST00000418838 1544 ntBASIC16.42■□□□□ 0.22
PDE6BP35913 MTG2-201ENST00000370823 2929 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
PDE6BP35913 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
PDE6BP35913 SLIRP-201ENST00000238688 394 ntAPPRIS P3 TSL 2 BASIC16.42■□□□□ 0.22
PDE6BP35913 TAGLN2-201ENST00000320307 709 ntAPPRIS P1 TSL 3 BASIC16.42■□□□□ 0.22
PDE6BP35913 USMG5-205ENST00000369825 789 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
PDE6BP35913 AC012066.1-201ENST00000439252 694 ntBASIC16.42■□□□□ 0.22
PDE6BP35913 AC002066.1-201ENST00000446355 514 ntTSL 5 BASIC16.42■□□□□ 0.22
PDE6BP35913 PRDX3P2-201ENST00000447051 611 ntBASIC16.42■□□□□ 0.22
PDE6BP35913 CDHR4-205ENST00000487256 1017 ntTSL 5 BASIC16.42■□□□□ 0.22
PDE6BP35913 ROPN1L-AS1-201ENST00000513037 189 ntTSL 2 BASIC16.42■□□□□ 0.22
PDE6BP35913 CCDC42-202ENST00000539522 1087 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
PDE6BP35913 SNRPF-205ENST00000553192 552 ntTSL 4 BASIC16.42■□□□□ 0.22
PDE6BP35913 OSGIN1-206ENST00000565123 833 ntTSL 2 BASIC16.42■□□□□ 0.22
PDE6BP35913 CR936218.2-201ENST00000574252 759 ntTSL 3 BASIC16.42■□□□□ 0.22
PDE6BP35913 MED11-203ENST00000575284 652 ntTSL 3 BASIC16.42■□□□□ 0.22
PDE6BP35913 CYP4F10P-201ENST00000589560 752 ntBASIC16.42■□□□□ 0.22
PDE6BP35913 AC012615.6-203ENST00000590531 272 ntTSL 2 BASIC16.42■□□□□ 0.22
PDE6BP35913 AC108673.2-201ENST00000608909 565 ntBASIC16.42■□□□□ 0.22
PDE6BP35913 AC021072.1-201ENST00000635789 835 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
PDE6BP35913 Metazoa_SRP.210-201ENST00000637921 244 ntBASIC16.42■□□□□ 0.22
PDE6BP35913 ENDOV-207ENST00000518907 2418 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
PDE6BP35913 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PDE6BP35913 UGT3A1-203ENST00000503189 1902 ntTSL 2 BASIC16.42■□□□□ 0.22
PDE6BP35913 ZNF582-201ENST00000301310 2824 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PDE6BP35913 KIF17-203ENST00000400463 3731 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
PDE6BP35913 AC020741.1-201ENST00000381217 2079 ntTSL 2 BASIC16.42■□□□□ 0.22
PDE6BP35913 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PDE6BP35913 RAB15-201ENST00000267512 3391 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
PDE6BP35913 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC16.42■□□□□ 0.22
PDE6BP35913 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
PDE6BP35913 BTN2A2-204ENST00000432533 1570 ntTSL 2 BASIC16.42■□□□□ 0.22
PDE6BP35913 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
PDE6BP35913 TRMT11-202ENST00000368332 1889 ntAPPRIS ALT1 TSL 2 BASIC16.42■□□□□ 0.22
PDE6BP35913 CYP2B7P-201ENST00000541697 1476 ntBASIC16.42■□□□□ 0.22
PDE6BP35913 KRT8P5-201ENST00000592443 1458 ntBASIC16.42■□□□□ 0.22
PDE6BP35913 PXK-210ENST00000479241 2817 ntTSL 2 BASIC16.41■□□□□ 0.22
PDE6BP35913 TCHH-201ENST00000368804 6900 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
PDE6BP35913 TSC22D3-204ENST00000372384 2199 ntTSL 2 BASIC16.41■□□□□ 0.22
PDE6BP35913 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC16.41■□□□□ 0.22
PDE6BP35913 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
PDE6BP35913 ZFAND1-201ENST00000220669 1798 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
PDE6BP35913 ZFAND1-221ENST00000523096 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PDE6BP35913 AC097376.2-205ENST00000610159 5334 ntBASIC16.41■□□□□ 0.22
PDE6BP35913 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
PDE6BP35913 PHF14-201ENST00000403050 4276 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
PDE6BP35913 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PDE6BP35913 DCAF13-201ENST00000297579 2642 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
PDE6BP35913 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC16.41■□□□□ 0.22
PDE6BP35913 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC16.41■□□□□ 0.22
PDE6BP35913 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PDE6BP35913 KRTAP10-8-201ENST00000334662 876 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
PDE6BP35913 MRPL55-210ENST00000366736 660 ntAPPRIS P1 TSL 3 BASIC16.41■□□□□ 0.22
PDE6BP35913 KRTAP10-10-201ENST00000380095 1100 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
PDE6BP35913 NANOS3-202ENST00000397555 769 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
PDE6BP35913 IDI2-AS1-204ENST00000437374 896 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
PDE6BP35913 AC098591.1-202ENST00000507914 937 ntBASIC16.41■□□□□ 0.22
PDE6BP35913 DDIAS-204ENST00000525388 961 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
PDE6BP35913 AC044802.2-201ENST00000551187 434 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
PDE6BP35913 AC034102.3-201ENST00000551846 300 ntTSL 3 BASIC16.41■□□□□ 0.22
PDE6BP35913 AC127496.5-202ENST00000572036 869 ntTSL 5 BASIC16.41■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 74.2 ms