Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 CCP110-203ENST00000396212 5549 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
HLA-DOAP06340 FCHO1-221ENST00000597512 2934 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
HLA-DOAP06340 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
HLA-DOAP06340 LIG1-202ENST00000427526 3027 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
HLA-DOAP06340 GOLGA8G-203ENST00000525590 2009 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
HLA-DOAP06340 GOLGA8F-202ENST00000532622 2009 ntAPPRIS P5 TSL 5 BASIC15.82■□□□□ 0.12
HLA-DOAP06340 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
HLA-DOAP06340 GIPC3-201ENST00000322315 4335 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
HLA-DOAP06340 HIST2H2BE-201ENST00000369155 2194 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
HLA-DOAP06340 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
HLA-DOAP06340 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
HLA-DOAP06340 PMM1-201ENST00000216259 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
HLA-DOAP06340 BCL2L11-203ENST00000357757 947 ntTSL 5 BASIC15.82■□□□□ 0.12
HLA-DOAP06340 MIR324-201ENST00000362183 83 ntBASIC15.82■□□□□ 0.12
HLA-DOAP06340 RPSAP6-201ENST00000417882 882 ntBASIC15.82■□□□□ 0.12
HLA-DOAP06340 SOD2-205ENST00000444946 917 ntTSL 2 BASIC15.82■□□□□ 0.12
HLA-DOAP06340 CDK7-211ENST00000514676 1164 ntTSL 5 BASIC15.82■□□□□ 0.12
HLA-DOAP06340 FAM213AP2-201ENST00000521579 683 ntBASIC15.82■□□□□ 0.12
HLA-DOAP06340 AL590235.1-201ENST00000564650 861 ntBASIC15.82■□□□□ 0.12
HLA-DOAP06340 AC006116.2-201ENST00000589958 988 ntBASIC15.82■□□□□ 0.12
HLA-DOAP06340 AC211476.2-201ENST00000608799 708 ntBASIC15.82■□□□□ 0.12
HLA-DOAP06340 AL591926.3-201ENST00000611630 238 ntBASIC15.82■□□□□ 0.12
HLA-DOAP06340 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
HLA-DOAP06340 SULT1A1-203ENST00000395607 1386 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
HLA-DOAP06340 TUBB8P5-201ENST00000445286 1351 ntBASIC15.82■□□□□ 0.12
HLA-DOAP06340 NAAA-203ENST00000505594 1425 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
HLA-DOAP06340 VOPP1-217ENST00000625836 1400 ntTSL 2 BASIC15.82■□□□□ 0.12
HLA-DOAP06340 NAP1L1-201ENST00000261182 4441 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
HLA-DOAP06340 EIF4G1-219ENST00000435046 4668 ntTSL 5 BASIC15.82■□□□□ 0.12
HLA-DOAP06340 FAM227B-212ENST00000561064 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
HLA-DOAP06340 OSBP2-219ENST00000535268 3248 ntTSL 2 BASIC15.82■□□□□ 0.12
HLA-DOAP06340 AL157832.2-205ENST00000597245 1649 ntBASIC15.82■□□□□ 0.12
HLA-DOAP06340 OAS3-201ENST00000228928 6719 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
HLA-DOAP06340 SERPING1-202ENST00000340687 1719 ntTSL 5 BASIC15.82■□□□□ 0.12
HLA-DOAP06340 ITGB1BP1-201ENST00000238091 1772 ntTSL 3 BASIC15.82■□□□□ 0.12
HLA-DOAP06340 HSD3B2-206ENST00000543831 1783 ntAPPRIS P1 TSL 3 BASIC15.82■□□□□ 0.12
HLA-DOAP06340 STK32B-201ENST00000282908 3582 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
HLA-DOAP06340 SP6-202ENST00000536300 3848 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
HLA-DOAP06340 CEP68-202ENST00000377990 5847 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
HLA-DOAP06340 AP001062.1-201ENST00000448927 4354 ntTSL 2 BASIC15.82■□□□□ 0.12
HLA-DOAP06340 PSAP-202ENST00000394936 2872 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
HLA-DOAP06340 DAZL-201ENST00000250863 3104 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
HLA-DOAP06340 USP44-202ENST00000393091 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
HLA-DOAP06340 INTS1-201ENST00000404767 6959 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
HLA-DOAP06340 CAMSAP3-201ENST00000160298 3889 ntAPPRIS P3 TSL 2 BASIC15.81■□□□□ 0.12
HLA-DOAP06340 FARS2-201ENST00000274680 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
HLA-DOAP06340 SESN3-201ENST00000278499 1710 ntTSL 2 BASIC15.81■□□□□ 0.12
HLA-DOAP06340 CA2-201ENST00000285379 1717 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
HLA-DOAP06340 ANK1-202ENST00000289734 8297 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
HLA-DOAP06340 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
HLA-DOAP06340 IP6K2-201ENST00000328631 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
HLA-DOAP06340 ZFYVE19-202ENST00000336455 1784 ntTSL 2 BASIC15.81■□□□□ 0.12
HLA-DOAP06340 ADAM33-201ENST00000350009 3480 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
HLA-DOAP06340 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
HLA-DOAP06340 CDCA7L-201ENST00000356195 2915 ntTSL 2 BASIC15.81■□□□□ 0.12
HLA-DOAP06340 GOLGA8A-201ENST00000359187 1877 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
HLA-DOAP06340 MRPL18-201ENST00000367034 978 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
HLA-DOAP06340 MEAF6-204ENST00000373075 2147 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
HLA-DOAP06340 ANGPTL2-202ENST00000373425 3707 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
HLA-DOAP06340 ARAF-202ENST00000377039 1271 ntTSL 2 BASIC15.81■□□□□ 0.12
HLA-DOAP06340 C20orf96-202ENST00000382369 1420 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
HLA-DOAP06340 SNORA57-201ENST00000383870 149 ntBASIC15.81■□□□□ 0.12
HLA-DOAP06340 TP63-206ENST00000392463 1386 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
HLA-DOAP06340 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
HLA-DOAP06340 ZNF384-204ENST00000396801 3008 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
HLA-DOAP06340 AL157823.1-201ENST00000403727 628 ntBASIC15.81■□□□□ 0.12
HLA-DOAP06340 TXLNGY-202ENST00000407724 1000 ntTSL 3 BASIC15.81■□□□□ 0.12
HLA-DOAP06340 HNRNPA1P33-201ENST00000421426 561 ntBASIC15.81■□□□□ 0.12
HLA-DOAP06340 STAG3L3-203ENST00000436857 1033 ntTSL 2 BASIC15.81■□□□□ 0.12
HLA-DOAP06340 AP005273.1-201ENST00000444862 522 ntTSL 3 BASIC15.81■□□□□ 0.12
HLA-DOAP06340 TGFA-206ENST00000445399 812 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
HLA-DOAP06340 AC026271.1-201ENST00000447794 1348 ntBASIC15.81■□□□□ 0.12
HLA-DOAP06340 CPA5-203ENST00000461828 1794 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
HLA-DOAP06340 ANAPC15-203ENST00000502597 1481 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
HLA-DOAP06340 AC092656.1-202ENST00000515843 998 ntTSL 4 BASIC15.81■□□□□ 0.12
HLA-DOAP06340 LINC00824-204ENST00000520766 597 ntTSL 5 BASIC15.81■□□□□ 0.12
HLA-DOAP06340 AC090200.1-201ENST00000522918 590 ntTSL 2 BASIC15.81■□□□□ 0.12
HLA-DOAP06340 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
HLA-DOAP06340 TAOK2-204ENST00000543033 4072 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
HLA-DOAP06340 AMHR2-204ENST00000550311 1787 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
HLA-DOAP06340 PATL2-208ENST00000560780 1863 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
HLA-DOAP06340 GOSR2-209ENST00000575949 1444 ntTSL 2 BASIC15.81■□□□□ 0.12
HLA-DOAP06340 AC068025.1-201ENST00000577218 762 ntTSL 3 BASIC15.81■□□□□ 0.12
HLA-DOAP06340 FBXO36P1-201ENST00000579006 471 ntBASIC15.81■□□□□ 0.12
HLA-DOAP06340 AC016582.2-202ENST00000587765 1094 ntBASIC15.81■□□□□ 0.12
HLA-DOAP06340 ZSCAN16-AS1-201ENST00000600652 2163 ntTSL 2 BASIC15.81■□□□□ 0.12
HLA-DOAP06340 SMIM26-203ENST00000608034 670 ntAPPRIS ALT2 TSL 3 BASIC15.81■□□□□ 0.12
HLA-DOAP06340 AC008622.3-201ENST00000621170 600 ntBASIC15.81■□□□□ 0.12
HLA-DOAP06340 SMYD5-209ENST00000629411 246 ntTSL 5 BASIC15.81■□□□□ 0.12
HLA-DOAP06340 GTF3A-209ENST00000640289 1098 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
HLA-DOAP06340 TBKBP1-201ENST00000361722 4121 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
HLA-DOAP06340 CCT6P3-201ENST00000419314 3702 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
HLA-DOAP06340 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
HLA-DOAP06340 SH3PXD2B-201ENST00000311601 7777 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
HLA-DOAP06340 RCAN2-204ENST00000405162 2457 ntTSL 5 BASIC15.8■□□□□ 0.12
HLA-DOAP06340 USP44-203ENST00000537435 2499 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
HLA-DOAP06340 SMARCA2-254ENST00000636903 2471 ntTSL 5 BASIC15.8■□□□□ 0.12
HLA-DOAP06340 KCNAB2-219ENST00000602612 2396 ntTSL 2 BASIC15.8■□□□□ 0.12
HLA-DOAP06340 WDFY2-203ENST00000612477 6932 ntTSL 2 BASIC15.8■□□□□ 0.12
HLA-DOAP06340 CALCOCO1-218ENST00000550804 2291 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 48.9 ms