Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 RNF170-206ENST00000527424 3880 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
RAB40CQ96S21 ADD1-207ENST00000446856 3745 ntTSL 5 BASIC11.05□□□□□ -0.64
RAB40CQ96S21 AGPAT1-203ENST00000375107 2234 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
RAB40CQ96S21 FAM95B1-201ENST00000455995 4236 ntTSL 2 BASIC11.05□□□□□ -0.64
RAB40CQ96S21 APOBR-202ENST00000564831 3792 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
RAB40CQ96S21 PI4KB-201ENST00000368872 3331 ntAPPRIS ALT1 TSL 5 BASIC11.05□□□□□ -0.64
RAB40CQ96S21 ZNF556-202ENST00000586426 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
RAB40CQ96S21 PSME3-217ENST00000622892 3183 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
RAB40CQ96S21 ANAPC7-203ENST00000455511 3045 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
RAB40CQ96S21 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC11.05□□□□□ -0.64
RAB40CQ96S21 TMUB2-201ENST00000319511 2418 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
RAB40CQ96S21 REXO5-208ENST00000564274 2447 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
RAB40CQ96S21 AL354861.3-201ENST00000600140 2412 ntBASIC11.05□□□□□ -0.64
RAB40CQ96S21 DDX11-223ENST00000542838 3079 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
RAB40CQ96S21 AOC3-201ENST00000308423 4026 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
RAB40CQ96S21 CHMP5-202ENST00000419016 1957 ntTSL 2 BASIC11.05□□□□□ -0.64
RAB40CQ96S21 BRD7P5-201ENST00000299197 1822 ntBASIC11.05□□□□□ -0.64
RAB40CQ96S21 FER1L5-207ENST00000641731 6294 ntAPPRIS ALT2 BASIC11.05□□□□□ -0.64
RAB40CQ96S21 ARL8B-202ENST00000419534 1684 ntTSL 2 BASIC11.04□□□□□ -0.64
RAB40CQ96S21 CSF3-201ENST00000225474 1509 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
RAB40CQ96S21 PACSIN1-207ENST00000620693 4299 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
RAB40CQ96S21 YTHDC1-201ENST00000344157 6232 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
RAB40CQ96S21 IP6K1-202ENST00000395238 4117 ntTSL 3 BASIC11.04□□□□□ -0.64
RAB40CQ96S21 KRT8P29-201ENST00000420409 1371 ntBASIC11.04□□□□□ -0.64
RAB40CQ96S21 MAK16-201ENST00000360128 3991 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
RAB40CQ96S21 SLC48A1-201ENST00000442218 3010 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
RAB40CQ96S21 SYMPK-201ENST00000245934 4195 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
RAB40CQ96S21 MISP-201ENST00000215582 2871 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
RAB40CQ96S21 TLK1-205ENST00000431350 5663 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
RAB40CQ96S21 NR1H3-217ENST00000467728 2731 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
RAB40CQ96S21 GDPD5-209ENST00000529721 3222 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
RAB40CQ96S21 GPATCH2L-202ENST00000312858 2438 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
RAB40CQ96S21 GTF2IRD1P1-202ENST00000457166 2426 ntTSL 2 BASIC11.04□□□□□ -0.64
RAB40CQ96S21 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
RAB40CQ96S21 EXOC8-201ENST00000366645 5100 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
RAB40CQ96S21 CDC42-202ENST00000344548 2256 ntAPPRIS ALT1 TSL 1 (best) BASIC11.04□□□□□ -0.64
RAB40CQ96S21 FH-201ENST00000366560 1797 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
RAB40CQ96S21 LIN28B-203ENST00000637759 2635 ntTSL 5 BASIC11.04□□□□□ -0.64
RAB40CQ96S21 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
RAB40CQ96S21 C20orf141-201ENST00000380589 730 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
RAB40CQ96S21 BAX-205ENST00000391871 687 ntTSL 5 BASIC11.04□□□□□ -0.64
RAB40CQ96S21 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
RAB40CQ96S21 LINC00431-201ENST00000440735 1189 ntTSL 5 BASIC11.04□□□□□ -0.64
RAB40CQ96S21 NAA50-208ENST00000497255 789 ntTSL 5 BASIC11.04□□□□□ -0.64
RAB40CQ96S21 SLC25A15P3-201ENST00000505530 290 ntBASIC11.04□□□□□ -0.64
RAB40CQ96S21 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC11.04□□□□□ -0.64
RAB40CQ96S21 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC11.04□□□□□ -0.64
RAB40CQ96S21 AC079316.1-201ENST00000548397 411 ntBASIC11.04□□□□□ -0.64
RAB40CQ96S21 AC011921.1-201ENST00000559739 557 ntTSL 4 BASIC11.04□□□□□ -0.64
RAB40CQ96S21 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
RAB40CQ96S21 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC11.04□□□□□ -0.64
RAB40CQ96S21 AL512343.1-201ENST00000605837 169 ntBASIC11.04□□□□□ -0.64
RAB40CQ96S21 AC244157.2-201ENST00000616239 1006 ntBASIC11.04□□□□□ -0.64
RAB40CQ96S21 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
RAB40CQ96S21 ERI1-209ENST00000523898 5036 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
RAB40CQ96S21 HNF1A-208ENST00000541395 3332 ntTSL 2 BASIC11.04□□□□□ -0.64
RAB40CQ96S21 LIN28A-202ENST00000326279 4008 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
RAB40CQ96S21 XYLT2-201ENST00000017003 3507 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
RAB40CQ96S21 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
RAB40CQ96S21 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC11.04□□□□□ -0.64
RAB40CQ96S21 MUC1-225ENST00000612778 1836 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
RAB40CQ96S21 CACNA1C-219ENST00000399649 6529 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
RAB40CQ96S21 PICART1-201ENST00000499842 2533 ntTSL 2 BASIC11.04□□□□□ -0.64
RAB40CQ96S21 STRA6-201ENST00000323940 2864 ntAPPRIS P1 TSL 2 BASIC11.04□□□□□ -0.64
RAB40CQ96S21 MED16-204ENST00000395808 3420 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
RAB40CQ96S21 CHTF18-201ENST00000262315 3090 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
RAB40CQ96S21 AGAP3-205ENST00000463381 2730 ntTSL 2 BASIC11.04□□□□□ -0.64
RAB40CQ96S21 ATF3-202ENST00000341491 2033 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
RAB40CQ96S21 TTN-AS1-209ENST00000456053 2033 ntTSL 2 BASIC11.04□□□□□ -0.64
RAB40CQ96S21 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
RAB40CQ96S21 UBE2L3-204ENST00000545681 2932 ntTSL 2 BASIC11.04□□□□□ -0.64
RAB40CQ96S21 ZMPSTE24-201ENST00000372759 3108 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
RAB40CQ96S21 GUCY2D-201ENST00000254854 3698 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
RAB40CQ96S21 SPG11-203ENST00000535302 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
RAB40CQ96S21 CCT8L2-201ENST00000359963 2060 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
RAB40CQ96S21 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
RAB40CQ96S21 DDC-204ENST00000426377 1700 ntTSL 3 BASIC11.04□□□□□ -0.64
RAB40CQ96S21 EGLN3-205ENST00000547327 2849 ntBASIC11.04□□□□□ -0.64
RAB40CQ96S21 LINC00664-203ENST00000599078 3760 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
RAB40CQ96S21 SLC37A4-201ENST00000330775 2102 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
RAB40CQ96S21 ACOXL-202ENST00000389811 2714 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
RAB40CQ96S21 FZD7-201ENST00000286201 3859 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
RAB40CQ96S21 RBM15-202ENST00000487146 3316 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
RAB40CQ96S21 WDR62-203ENST00000401500 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
RAB40CQ96S21 TAGLN2-203ENST00000368097 1604 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
RAB40CQ96S21 EPM2A-207ENST00000611340 2786 ntTSL 2 BASIC11.03□□□□□ -0.64
RAB40CQ96S21 GRM2-202ENST00000395052 3151 ntAPPRIS P1 TSL 2 BASIC11.03□□□□□ -0.64
RAB40CQ96S21 PTCD2-212ENST00000543322 2029 ntTSL 2 BASIC11.03□□□□□ -0.64
RAB40CQ96S21 LINC00908-202ENST00000578613 2242 ntTSL 2 BASIC11.03□□□□□ -0.64
RAB40CQ96S21 TIAF1-201ENST00000359450 5337 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
RAB40CQ96S21 KCTD10-201ENST00000228495 4163 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
RAB40CQ96S21 WIPF3-201ENST00000242140 4184 ntAPPRIS P2 TSL 5 BASIC11.03□□□□□ -0.64
RAB40CQ96S21 AC096564.1-201ENST00000499098 2810 ntTSL 2 BASIC11.03□□□□□ -0.64
RAB40CQ96S21 CEP63-215ENST00000606977 2800 ntAPPRIS P3 TSL 5 BASIC11.03□□□□□ -0.64
RAB40CQ96S21 CLGN-201ENST00000325617 3043 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
RAB40CQ96S21 AFF2-202ENST00000342251 7313 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
RAB40CQ96S21 NQO2-205ENST00000380455 10084 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
RAB40CQ96S21 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
RAB40CQ96S21 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC11.03□□□□□ -0.64
RAB40CQ96S21 MAD2L2-206ENST00000376672 1002 ntTSL 3 BASIC11.03□□□□□ -0.64
Retrieved 100 of 98,524 protein–RNA pairs in 62.4 ms