Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 AL606748.1-201ENST00000423919 655 ntTSL 3 BASIC14.38□□□□□ -0.11
LMO3Q8TAP4 AC092810.2-201ENST00000431570 362 ntBASIC14.38□□□□□ -0.11
LMO3Q8TAP4 PGK1P2-201ENST00000431702 1214 ntBASIC14.38□□□□□ -0.11
LMO3Q8TAP4 AC003958.1-201ENST00000435883 421 ntBASIC14.38□□□□□ -0.11
LMO3Q8TAP4 NALT1-202ENST00000450304 437 ntTSL 3 BASIC14.38□□□□□ -0.11
LMO3Q8TAP4 AC091179.2-201ENST00000495536 532 ntTSL 3 BASIC14.38□□□□□ -0.11
LMO3Q8TAP4 AL161668.2-201ENST00000531638 492 ntTSL 5 BASIC14.38□□□□□ -0.11
LMO3Q8TAP4 CMTM5-208ENST00000555731 831 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
LMO3Q8TAP4 NPM1P43-201ENST00000558669 786 ntBASIC14.38□□□□□ -0.11
LMO3Q8TAP4 DCTPP1-202ENST00000565758 749 ntTSL 3 BASIC14.38□□□□□ -0.11
LMO3Q8TAP4 SAXO2-207ENST00000566861 404 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
LMO3Q8TAP4 HIST2H4A-201ENST00000578186 583 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
LMO3Q8TAP4 MIR4649-201ENST00000582839 64 ntBASIC14.38□□□□□ -0.11
LMO3Q8TAP4 AC011481.2-201ENST00000585408 426 ntTSL 3 BASIC14.38□□□□□ -0.11
LMO3Q8TAP4 AP001462.1-201ENST00000594089 452 ntBASIC14.38□□□□□ -0.11
LMO3Q8TAP4 TREX1-206ENST00000629913 945 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
LMO3Q8TAP4 NPAS4-201ENST00000311034 3303 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
LMO3Q8TAP4 CT55-201ENST00000276241 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
LMO3Q8TAP4 RSPH4A-202ENST00000368580 1410 ntTSL 5 BASIC14.38□□□□□ -0.11
LMO3Q8TAP4 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
LMO3Q8TAP4 KANK4-201ENST00000317477 2080 ntTSL 2 BASIC14.38□□□□□ -0.11
LMO3Q8TAP4 AGBL3-202ENST00000435976 2495 ntTSL 5 BASIC14.38□□□□□ -0.11
LMO3Q8TAP4 RRBP1-206ENST00000455029 2485 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
LMO3Q8TAP4 GLYR1-212ENST00000591451 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
LMO3Q8TAP4 SLC25A20-202ENST00000430379 1576 ntTSL 3 BASIC14.38□□□□□ -0.11
LMO3Q8TAP4 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
LMO3Q8TAP4 MYH14-201ENST00000262269 3848 ntTSL 5 BASIC14.38□□□□□ -0.11
LMO3Q8TAP4 SYNGR1-203ENST00000328933 4391 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
LMO3Q8TAP4 MRPL44-201ENST00000258383 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
LMO3Q8TAP4 NFIX-201ENST00000358552 1727 ntTSL 5 BASIC14.38□□□□□ -0.11
LMO3Q8TAP4 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
LMO3Q8TAP4 RPUSD4-201ENST00000298317 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
LMO3Q8TAP4 MAP3K12-203ENST00000547035 2944 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
LMO3Q8TAP4 IRF6-204ENST00000542854 4256 ntTSL 2 BASIC14.38□□□□□ -0.11
LMO3Q8TAP4 PARP10-203ENST00000524918 3469 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
LMO3Q8TAP4 PPCDC-201ENST00000342932 2250 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
LMO3Q8TAP4 C2-206ENST00000442278 2434 ntTSL 2 BASIC14.37□□□□□ -0.11
LMO3Q8TAP4 ADAMTS13-202ENST00000356589 4349 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
LMO3Q8TAP4 EFHC1-224ENST00000636702 2197 ntTSL 5 BASIC14.37□□□□□ -0.11
LMO3Q8TAP4 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
LMO3Q8TAP4 TNFRSF11A-205ENST00000616710 3809 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
LMO3Q8TAP4 LHFPL3-201ENST00000401970 1378 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
LMO3Q8TAP4 FAM86JP-201ENST00000467239 1910 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
LMO3Q8TAP4 AC034205.3-201ENST00000603595 1376 ntBASIC14.37□□□□□ -0.11
LMO3Q8TAP4 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
LMO3Q8TAP4 NDRG4-201ENST00000258187 3324 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
LMO3Q8TAP4 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
LMO3Q8TAP4 VPS54-203ENST00000409558 4337 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
LMO3Q8TAP4 MATN1-AS1-201ENST00000414532 3925 ntTSL 2 BASIC14.37□□□□□ -0.11
LMO3Q8TAP4 DBF4B-202ENST00000393547 1810 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
LMO3Q8TAP4 RPRD2-201ENST00000369067 1043 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
LMO3Q8TAP4 STX1A-202ENST00000395154 1022 ntTSL 3 BASIC14.37□□□□□ -0.11
LMO3Q8TAP4 WASIR1-201ENST00000399966 1054 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
LMO3Q8TAP4 FAM126A-201ENST00000409763 616 ntTSL 2 BASIC14.37□□□□□ -0.11
LMO3Q8TAP4 LINC00866-201ENST00000427379 418 ntTSL 2 BASIC14.37□□□□□ -0.11
LMO3Q8TAP4 AC004837.1-201ENST00000446267 564 ntBASIC14.37□□□□□ -0.11
LMO3Q8TAP4 LINC00211-203ENST00000446799 662 ntTSL 3 BASIC14.37□□□□□ -0.11
LMO3Q8TAP4 RPS15P5-201ENST00000449885 432 ntBASIC14.37□□□□□ -0.11
LMO3Q8TAP4 AC114781.1-201ENST00000450559 1028 ntBASIC14.37□□□□□ -0.11
LMO3Q8TAP4 HNRNPA1P56-201ENST00000505767 954 ntBASIC14.37□□□□□ -0.11
LMO3Q8TAP4 AC020636.2-201ENST00000569170 1189 ntAPPRIS P5 TSL 1 (best) BASIC14.37□□□□□ -0.11
LMO3Q8TAP4 CYB5D2-202ENST00000573984 495 ntTSL 4 BASIC14.37□□□□□ -0.11
LMO3Q8TAP4 DYRK1B-208ENST00000601972 772 ntTSL 2 BASIC14.37□□□□□ -0.11
LMO3Q8TAP4 HIST1H2BE-201ENST00000614097 497 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
LMO3Q8TAP4 AC105137.3-201ENST00000617588 984 ntBASIC14.37□□□□□ -0.11
LMO3Q8TAP4 HNRNPDL-207ENST00000614627 3968 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
LMO3Q8TAP4 BEGAIN-212ENST00000637716 3259 ntAPPRIS P5 TSL 5 BASIC14.37□□□□□ -0.11
LMO3Q8TAP4 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
LMO3Q8TAP4 CHRNA2-201ENST00000240132 1735 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
LMO3Q8TAP4 AS3MT-202ENST00000615257 1723 ntTSL 5 BASIC14.37□□□□□ -0.11
LMO3Q8TAP4 SMTN-203ENST00000358743 3198 ntAPPRIS P4 TSL 2 BASIC14.37□□□□□ -0.11
LMO3Q8TAP4 HNF1A-208ENST00000541395 3332 ntTSL 2 BASIC14.37□□□□□ -0.11
LMO3Q8TAP4 AC120114.4-201ENST00000623731 2194 ntBASIC14.37□□□□□ -0.11
LMO3Q8TAP4 NAGK-202ENST00000418807 2343 ntTSL 5 BASIC14.37□□□□□ -0.11
LMO3Q8TAP4 RAB37-204ENST00000392613 2617 ntAPPRIS ALT1 TSL 2 BASIC14.37□□□□□ -0.11
LMO3Q8TAP4 HTR4-201ENST00000360693 3082 ntTSL 5 BASIC14.37□□□□□ -0.11
LMO3Q8TAP4 PKD1P5-201ENST00000532415 10291 ntBASIC14.37□□□□□ -0.11
LMO3Q8TAP4 EGFR-207ENST00000455089 3844 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
LMO3Q8TAP4 GPT2-201ENST00000340124 3984 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
LMO3Q8TAP4 NTSR1-201ENST00000370501 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
LMO3Q8TAP4 KRT8P25-201ENST00000473150 1456 ntBASIC14.37□□□□□ -0.11
LMO3Q8TAP4 MMAB-210ENST00000545712 4438 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
LMO3Q8TAP4 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
LMO3Q8TAP4 HAO1-201ENST00000378789 1777 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
LMO3Q8TAP4 ZFYVE27-205ENST00000370613 2669 ntTSL 2 BASIC14.37□□□□□ -0.11
LMO3Q8TAP4 HMGA2-204ENST00000403681 4473 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
LMO3Q8TAP4 AADAT-206ENST00000509167 2113 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
LMO3Q8TAP4 GIMAP1-GIMAP5-201ENST00000611999 2148 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
LMO3Q8TAP4 BTNL8-203ENST00000400707 1512 ntTSL 2 BASIC14.36□□□□□ -0.11
LMO3Q8TAP4 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
LMO3Q8TAP4 MDM1-201ENST00000303145 2918 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
LMO3Q8TAP4 STRADA-204ENST00000392950 2778 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
LMO3Q8TAP4 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
LMO3Q8TAP4 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
LMO3Q8TAP4 MAGEC3-205ENST00000544766 1707 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
LMO3Q8TAP4 CARS-AS1-201ENST00000499962 2664 ntTSL 2 BASIC14.36□□□□□ -0.11
LMO3Q8TAP4 ROBO4-201ENST00000306534 4710 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
LMO3Q8TAP4 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
LMO3Q8TAP4 AADACL4-201ENST00000376221 1575 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
LMO3Q8TAP4 OGFOD3-201ENST00000313056 4287 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms