Protein–RNA interactions for Protein: P35913

PDE6B, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, humanhuman

Predictions only

Length 854 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6BP35913 RHOH-219ENST00000614836 2114 ntAPPRIS P1 TSL 3 BASIC16.45■□□□□ 0.22
PDE6BP35913 STT3A-211ENST00000529196 2402 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PDE6BP35913 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC16.45■□□□□ 0.22
PDE6BP35913 AC012485.1-201ENST00000456601 2509 ntTSL 2 BASIC16.45■□□□□ 0.22
PDE6BP35913 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PDE6BP35913 ACTN1-205ENST00000538545 2813 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
PDE6BP35913 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PDE6BP35913 OR6M1-201ENST00000309154 1053 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
PDE6BP35913 BNIP1-202ENST00000351486 1184 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PDE6BP35913 HIST1H3H-201ENST00000369163 1237 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
PDE6BP35913 KHDC1L-201ENST00000370388 635 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PDE6BP35913 JPT2-203ENST00000382711 894 ntTSL 4 BASIC16.45■□□□□ 0.22
PDE6BP35913 AL450322.2-201ENST00000421629 759 ntTSL 3 BASIC16.45■□□□□ 0.22
PDE6BP35913 AP000346.2-202ENST00000425948 383 ntBASIC16.45■□□□□ 0.22
PDE6BP35913 PDLIM2-212ENST00000443561 701 ntTSL 2 BASIC16.45■□□□□ 0.22
PDE6BP35913 ADPGK-202ENST00000456471 808 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
PDE6BP35913 LUCAT1-201ENST00000511918 828 ntTSL 3 BASIC16.45■□□□□ 0.22
PDE6BP35913 SKINT1L-204ENST00000604015 540 ntTSL 4 BASIC16.45■□□□□ 0.22
PDE6BP35913 PDZRN3-AS1-203ENST00000608743 780 ntTSL 5 BASIC16.45■□□□□ 0.22
PDE6BP35913 MIR6165-201ENST00000614803 84 ntBASIC16.45■□□□□ 0.22
PDE6BP35913 PSMB8-201ENST00000374881 1351 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
PDE6BP35913 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PDE6BP35913 KAT7-204ENST00000454930 1774 ntTSL 2 BASIC16.45■□□□□ 0.22
PDE6BP35913 GIT2-201ENST00000320063 2094 ntTSL 5 BASIC16.45■□□□□ 0.22
PDE6BP35913 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
PDE6BP35913 SLC26A5-203ENST00000354356 2686 ntAPPRIS ALT1 TSL 5 BASIC16.45■□□□□ 0.22
PDE6BP35913 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
PDE6BP35913 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
PDE6BP35913 NUTM2E-201ENST00000429984 3292 ntAPPRIS P5 TSL 5 BASIC16.45■□□□□ 0.22
PDE6BP35913 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
PDE6BP35913 GALNT7-201ENST00000265000 4307 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PDE6BP35913 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
PDE6BP35913 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
PDE6BP35913 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
PDE6BP35913 FAM86C1-202ENST00000359244 2110 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
PDE6BP35913 MRRF-201ENST00000297908 1841 ntTSL 2 BASIC16.45■□□□□ 0.22
PDE6BP35913 FARP2-201ENST00000264042 4051 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PDE6BP35913 PIN4-203ENST00000373669 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PDE6BP35913 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
PDE6BP35913 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PDE6BP35913 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
PDE6BP35913 IFNAR2-201ENST00000342101 2606 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
PDE6BP35913 BLVRA-201ENST00000265523 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PDE6BP35913 MRPL55-207ENST00000366733 834 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
PDE6BP35913 MIR181D-201ENST00000384853 137 ntBASIC16.44■□□□□ 0.22
PDE6BP35913 MIR193A-201ENST00000384882 88 ntBASIC16.44■□□□□ 0.22
PDE6BP35913 CLK2P1-201ENST00000416636 1294 ntBASIC16.44■□□□□ 0.22
PDE6BP35913 HNRNPA1P73-201ENST00000446472 928 ntBASIC16.44■□□□□ 0.22
PDE6BP35913 VPS33A-202ENST00000451053 1154 ntTSL 3 BASIC16.44■□□□□ 0.22
PDE6BP35913 AC012100.1-201ENST00000470304 282 ntBASIC16.44■□□□□ 0.22
PDE6BP35913 AC016650.1-201ENST00000502834 708 ntTSL 2 BASIC16.44■□□□□ 0.22
PDE6BP35913 MCPH1-AS1-201ENST00000515608 2147 ntTSL 5 BASIC16.44■□□□□ 0.22
PDE6BP35913 CTB-178M22.2-201ENST00000519795 503 ntTSL 4 BASIC16.44■□□□□ 0.22
PDE6BP35913 SLC22A18AS-202ENST00000526203 664 ntAPPRIS P2 TSL 3 BASIC16.44■□□□□ 0.22
PDE6BP35913 RAB42P1-201ENST00000555078 316 ntBASIC16.44■□□□□ 0.22
PDE6BP35913 AC108102.1-201ENST00000606528 548 ntTSL 3 BASIC16.44■□□□□ 0.22
PDE6BP35913 MFSD12-215ENST00000615613 688 ntBASIC16.44■□□□□ 0.22
PDE6BP35913 SMIM11B-202ENST00000619874 843 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PDE6BP35913 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PDE6BP35913 PCDHA11-201ENST00000398640 6115 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
PDE6BP35913 OR2A25-203ENST00000641663 1741 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
PDE6BP35913 AMT-201ENST00000273588 2280 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
PDE6BP35913 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
PDE6BP35913 MST1P2-201ENST00000457982 2291 ntBASIC16.44■□□□□ 0.22
PDE6BP35913 TMBIM6-203ENST00000423828 3254 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
PDE6BP35913 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
PDE6BP35913 ZNF595-203ENST00000608255 1999 ntTSL 2 BASIC16.44■□□□□ 0.22
PDE6BP35913 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PDE6BP35913 CALHM1-201ENST00000329905 3053 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PDE6BP35913 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC16.44■□□□□ 0.22
PDE6BP35913 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PDE6BP35913 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC16.44■□□□□ 0.22
PDE6BP35913 MRPL43-202ENST00000318325 2134 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
PDE6BP35913 AP001258.1-201ENST00000501817 2110 ntTSL 5 BASIC16.43■□□□□ 0.22
PDE6BP35913 PHACTR2-202ENST00000367582 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
PDE6BP35913 MAP2K4-201ENST00000353533 3826 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
PDE6BP35913 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC16.43■□□□□ 0.22
PDE6BP35913 ATP6V0A4-202ENST00000353492 2709 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PDE6BP35913 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
PDE6BP35913 LHX1-201ENST00000614239 3425 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PDE6BP35913 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC16.43■□□□□ 0.22
PDE6BP35913 PPARGC1B-203ENST00000394320 4803 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
PDE6BP35913 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PDE6BP35913 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC16.43■□□□□ 0.22
PDE6BP35913 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
PDE6BP35913 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
PDE6BP35913 OR52L1-201ENST00000332249 1094 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
PDE6BP35913 RHCE-203ENST00000346452 971 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
PDE6BP35913 CST11-202ENST00000377009 554 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PDE6BP35913 C9orf24-202ENST00000379124 648 ntTSL 3 BASIC16.43■□□□□ 0.22
PDE6BP35913 SLC2A11-208ENST00000405847 730 ntTSL 2 BASIC16.43■□□□□ 0.22
PDE6BP35913 AC005042.2-201ENST00000449526 510 ntTSL 4 BASIC16.43■□□□□ 0.22
PDE6BP35913 SVILP1-203ENST00000450581 486 ntTSL 3 BASIC16.43■□□□□ 0.22
PDE6BP35913 LINC02151-201ENST00000452629 921 ntTSL 2 BASIC16.43■□□□□ 0.22
PDE6BP35913 AC109466.1-201ENST00000517508 804 ntTSL 4 BASIC16.43■□□□□ 0.22
PDE6BP35913 FAM213AP2-201ENST00000521579 683 ntBASIC16.43■□□□□ 0.22
PDE6BP35913 IFI27L1-203ENST00000553664 647 ntTSL 5 BASIC16.43■□□□□ 0.22
PDE6BP35913 AC090825.2-201ENST00000557959 739 ntBASIC16.43■□□□□ 0.22
PDE6BP35913 DSCR9-203ENST00000581640 472 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
PDE6BP35913 SMIM22-207ENST00000589721 822 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 51.7 ms