Protein–RNA interactions for Protein: P05067

APP, Amyloid-beta A4 protein, humanhuman

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APPP05067 XG-201ENST00000381174 2315 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
APPP05067 DGCR9-201ENST00000609630 2415 ntBASIC16.34■□□□□ 0.21
APPP05067 SIGLEC9-201ENST00000250360 1690 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
APPP05067 HOXC4-202ENST00000430889 1666 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
APPP05067 DMTN-220ENST00000523266 2735 ntTSL 5 BASIC16.33■□□□□ 0.21
APPP05067 TRAF6-202ENST00000526995 4627 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
APPP05067 RAPGEF3-218ENST00000548919 2776 ntTSL 2 BASIC16.33■□□□□ 0.21
APPP05067 PRPF38A-201ENST00000257181 5274 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
APPP05067 ARMC7-201ENST00000245543 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
APPP05067 PRICKLE1-203ENST00000455697 4277 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.21
APPP05067 EML5-207ENST00000554922 9570 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
APPP05067 MKL1-213ENST00000620651 3757 ntTSL 5 BASIC16.33■□□□□ 0.2
APPP05067 PON3-201ENST00000265627 1105 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
APPP05067 SH3BGRL3-202ENST00000319041 768 ntTSL 2 BASIC16.33■□□□□ 0.2
APPP05067 AP000354.1-201ENST00000396982 456 ntBASIC16.33■□□□□ 0.2
APPP05067 SNU13-204ENST00000402458 462 ntTSL 3 BASIC16.33■□□□□ 0.2
APPP05067 AL354892.2-201ENST00000413088 403 ntTSL 5 BASIC16.33■□□□□ 0.2
APPP05067 ELFN1-AS1-201ENST00000415399 636 ntTSL 5 BASIC16.33■□□□□ 0.2
APPP05067 AL161733.1-201ENST00000421067 462 ntTSL 3 BASIC16.33■□□□□ 0.2
APPP05067 SNX3-204ENST00000426155 1072 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
APPP05067 LINC00211-203ENST00000446799 662 ntTSL 3 BASIC16.33■□□□□ 0.2
APPP05067 NCK1-AS1-203ENST00000474250 827 ntTSL 2 BASIC16.33■□□□□ 0.2
APPP05067 AC008026.2-201ENST00000495438 348 ntBASIC16.33■□□□□ 0.2
APPP05067 HNRNPA1P56-201ENST00000505767 954 ntBASIC16.33■□□□□ 0.2
APPP05067 AC100858.3-202ENST00000533496 553 ntTSL 4 BASIC16.33■□□□□ 0.2
APPP05067 EMP2-203ENST00000536829 781 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
APPP05067 CES1P2-201ENST00000566467 1242 ntBASIC16.33■□□□□ 0.2
APPP05067 TRMT112P3-201ENST00000580149 358 ntBASIC16.33■□□□□ 0.2
APPP05067 TUBB6-214ENST00000592683 481 ntTSL 4 BASIC16.33■□□□□ 0.2
APPP05067 AC005759.1-202ENST00000599416 415 ntTSL 3 BASIC16.33■□□□□ 0.2
APPP05067 NFATC4-207ENST00000553469 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
APPP05067 CPNE5-201ENST00000244751 3897 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
APPP05067 KRT8P42-201ENST00000405771 1399 ntBASIC16.33■□□□□ 0.2
APPP05067 PRAME-214ENST00000543184 2758 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
APPP05067 KCTD6-202ENST00000404589 1533 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
APPP05067 PITRM1-206ENST00000451104 3183 ntTSL 2 BASIC16.33■□□□□ 0.2
APPP05067 PRPF18-202ENST00000378572 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
APPP05067 PFAS-201ENST00000314666 5371 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
APPP05067 RC3H2-205ENST00000423239 3623 ntTSL 5 BASIC16.33■□□□□ 0.2
APPP05067 PGAP2-202ENST00000300730 1843 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
APPP05067 PGAP2-203ENST00000396986 1837 ntTSL 2 BASIC16.33■□□□□ 0.2
APPP05067 ADRA1A-210ENST00000519229 1838 ntTSL 5 BASIC16.33■□□□□ 0.2
APPP05067 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
APPP05067 CREBL2-201ENST00000228865 3754 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
APPP05067 MBTD1-204ENST00000586178 5382 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
APPP05067 TNNI1-207ENST00000622580 6142 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
APPP05067 APLP2-203ENST00000338167 3270 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
APPP05067 FAM109A-201ENST00000361483 3256 ntAPPRIS ALT2 TSL 3 BASIC16.32■□□□□ 0.2
APPP05067 PHTF1-204ENST00000369604 3273 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
APPP05067 MICAL1-202ENST00000358807 3645 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
APPP05067 SLC4A7-203ENST00000425128 7970 ntTSL 5 BASIC16.32■□□□□ 0.2
APPP05067 STAG3-206ENST00000426455 4450 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
APPP05067 NR0B2-201ENST00000254227 1156 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
APPP05067 SIAE-201ENST00000263593 5583 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
APPP05067 CT55-201ENST00000276241 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
APPP05067 MRPL17-201ENST00000288937 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
APPP05067 PINX1-201ENST00000314787 1545 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
APPP05067 ART3-201ENST00000341029 1517 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
APPP05067 SIGLEC6-201ENST00000343300 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
APPP05067 GPM6B-202ENST00000355135 1673 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
APPP05067 TNFRSF1A-202ENST00000366159 1339 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
APPP05067 NIT1-202ENST00000368008 2081 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
APPP05067 TRMT10B-202ENST00000377753 2027 ntTSL 2 BASIC16.32■□□□□ 0.2
APPP05067 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
APPP05067 SFMBT2-202ENST00000379711 692 ntTSL 5 BASIC16.32■□□□□ 0.2
APPP05067 C1QTNF9-202ENST00000382071 1854 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
APPP05067 IGLC1-201ENST00000390321 460 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
APPP05067 CYB561-202ENST00000392975 3007 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
APPP05067 UBE2I-204ENST00000397515 3109 ntAPPRIS P1 TSL 3 BASIC16.32■□□□□ 0.2
APPP05067 ZNF609-202ENST00000416172 3863 ntTSL 2 BASIC16.32■□□□□ 0.2
APPP05067 FAM168A-204ENST00000450446 1364 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
APPP05067 AC068057.1-201ENST00000453322 709 ntTSL 2 BASIC16.32■□□□□ 0.2
APPP05067 RN7SL351P-201ENST00000469306 248 ntBASIC16.32■□□□□ 0.2
APPP05067 AC022858.1-202ENST00000521084 393 ntTSL 3 BASIC16.32■□□□□ 0.2
APPP05067 BAK1P2-201ENST00000532665 631 ntBASIC16.32■□□□□ 0.2
APPP05067 RAP1B-216ENST00000537460 1072 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
APPP05067 RNASEK-204ENST00000552039 591 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
APPP05067 FKBP11-212ENST00000552878 1052 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
APPP05067 AC092115.1-201ENST00000566277 1402 ntBASIC16.32■□□□□ 0.2
APPP05067 AC020636.2-201ENST00000569170 1189 ntAPPRIS P5 TSL 1 (best) BASIC16.32■□□□□ 0.2
APPP05067 NAT9-224ENST00000583757 583 ntTSL 3 BASIC16.32■□□□□ 0.2
APPP05067 MIR4750-201ENST00000584564 56 ntBASIC16.32■□□□□ 0.2
APPP05067 AC010976.2-201ENST00000609697 852 ntBASIC16.32■□□□□ 0.2
APPP05067 AP000356.3-203ENST00000614808 601 ntTSL 3 BASIC16.32■□□□□ 0.2
APPP05067 WAPL-206ENST00000618527 6152 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
APPP05067 DDC-214ENST00000622873 1839 ntTSL 3 BASIC16.32■□□□□ 0.2
APPP05067 CNTN2-201ENST00000331830 7999 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
APPP05067 AFDN-206ENST00000392112 7459 ntTSL 5 BASIC16.32■□□□□ 0.2
APPP05067 CPLX2-201ENST00000359546 5023 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
APPP05067 MAMDC4-202ENST00000445819 3895 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
APPP05067 CATSPERE-203ENST00000366534 3333 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
APPP05067 WHRN-201ENST00000265134 2847 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
APPP05067 NSD2-203ENST00000382888 2666 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
APPP05067 DEDD-202ENST00000368006 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
APPP05067 COL1A1-201ENST00000225964 6727 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
APPP05067 VWA5B1-201ENST00000289815 4475 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
APPP05067 IFT172-202ENST00000359466 2207 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
APPP05067 LILRB5-203ENST00000449561 2137 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
APPP05067 ADD1-207ENST00000446856 3745 ntTSL 5 BASIC16.31■□□□□ 0.2
APPP05067 AP001999.1-201ENST00000513405 3684 ntTSL 2 BASIC16.31■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 77.7 ms