Protein–RNA interactions for Protein: Q9GZM3

POLR2J2, DNA-directed RNA polymerase II subunit RPB11-b1, humanhuman

Known RBP Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J2Q9GZM3 OR8S1-201ENST00000310194 1080 ntBASIC12.6□□□□□ -0.39
POLR2J2Q9GZM3 ALG1L-201ENST00000340333 805 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
POLR2J2Q9GZM3 CLIC1-206ENST00000375779 1127 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
POLR2J2Q9GZM3 DEFB123-201ENST00000376309 467 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
POLR2J2Q9GZM3 HTR4-203ENST00000377888 2962 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
POLR2J2Q9GZM3 CRCP-204ENST00000398684 492 ntTSL 2 BASIC12.6□□□□□ -0.39
POLR2J2Q9GZM3 AL391839.2-201ENST00000412085 383 ntTSL 5 BASIC12.6□□□□□ -0.39
POLR2J2Q9GZM3 RHBDD2-203ENST00000428119 1274 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
POLR2J2Q9GZM3 VAMP8-203ENST00000432071 664 ntTSL 3 BASIC12.6□□□□□ -0.39
POLR2J2Q9GZM3 CCDC18-AS1-219ENST00000451302 1212 ntTSL 3 BASIC12.6□□□□□ -0.39
POLR2J2Q9GZM3 RN7SL788P-201ENST00000460504 316 ntBASIC12.6□□□□□ -0.39
POLR2J2Q9GZM3 TRBC2-201ENST00000466254 758 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
POLR2J2Q9GZM3 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
POLR2J2Q9GZM3 NDUFC1-209ENST00000539002 1198 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
POLR2J2Q9GZM3 NDUFC1-211ENST00000544855 1257 ntAPPRIS P1 TSL 3 BASIC12.6□□□□□ -0.39
POLR2J2Q9GZM3 C12orf73-210ENST00000552940 685 ntTSL 2 BASIC12.6□□□□□ -0.39
POLR2J2Q9GZM3 AL135838.1-202ENST00000556411 441 ntTSL 2 BASIC12.6□□□□□ -0.39
POLR2J2Q9GZM3 AC145285.5-201ENST00000562217 361 ntBASIC12.6□□□□□ -0.39
POLR2J2Q9GZM3 AC023824.4-202ENST00000569557 849 ntTSL 3 BASIC12.6□□□□□ -0.39
POLR2J2Q9GZM3 AC090617.4-201ENST00000572404 422 ntTSL 3 BASIC12.6□□□□□ -0.39
POLR2J2Q9GZM3 LRRC37A6P-204ENST00000575554 573 ntTSL 3 BASIC12.6□□□□□ -0.39
POLR2J2Q9GZM3 PGPEP1-206ENST00000597431 545 ntTSL 5 BASIC12.6□□□□□ -0.39
POLR2J2Q9GZM3 AL049840.2-201ENST00000602722 535 ntBASIC12.6□□□□□ -0.39
POLR2J2Q9GZM3 HDDC2-204ENST00000608295 879 ntTSL 5 BASIC12.6□□□□□ -0.39
POLR2J2Q9GZM3 ALG1L-202ENST00000611639 701 ntAPPRIS ALT2 TSL 3 BASIC12.6□□□□□ -0.39
POLR2J2Q9GZM3 C1orf232-202ENST00000635463 466 ntAPPRIS ALT2 TSL 2 BASIC12.6□□□□□ -0.39
POLR2J2Q9GZM3 SLC28A1-201ENST00000286749 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
POLR2J2Q9GZM3 KLF7-204ENST00000423015 1788 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
POLR2J2Q9GZM3 AC015909.3-201ENST00000572855 1794 ntBASIC12.6□□□□□ -0.39
POLR2J2Q9GZM3 GPN1-211ENST00000610189 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
POLR2J2Q9GZM3 INHBA-201ENST00000242208 6064 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
POLR2J2Q9GZM3 FGFRL1-202ENST00000398484 3639 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
POLR2J2Q9GZM3 PSMC3IP-201ENST00000253789 1408 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
POLR2J2Q9GZM3 KRT8P31-201ENST00000504812 1408 ntBASIC12.6□□□□□ -0.39
POLR2J2Q9GZM3 MEIS2-215ENST00000559561 1442 ntAPPRIS ALT1 TSL 5 BASIC12.6□□□□□ -0.39
POLR2J2Q9GZM3 MANBAL-201ENST00000373605 1915 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
POLR2J2Q9GZM3 CDK12-201ENST00000430627 5918 ntAPPRIS ALT1 TSL 1 (best) BASIC12.6□□□□□ -0.39
POLR2J2Q9GZM3 HDAC7-202ENST00000354334 4065 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
POLR2J2Q9GZM3 HDAC7-201ENST00000080059 4095 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
POLR2J2Q9GZM3 DPP9-214ENST00000598800 3098 ntTSL 5 BASIC12.6□□□□□ -0.39
POLR2J2Q9GZM3 RNH1-224ENST00000534797 2973 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
POLR2J2Q9GZM3 MCL1-204ENST00000620947 3626 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
POLR2J2Q9GZM3 ZDHHC11-201ENST00000283441 2604 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
POLR2J2Q9GZM3 ADAMTSL4-202ENST00000369038 4167 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
POLR2J2Q9GZM3 BCAM-211ENST00000611077 3430 ntTSL 5 BASIC12.59□□□□□ -0.39
POLR2J2Q9GZM3 SYNCRIP-201ENST00000355238 6449 ntAPPRIS ALT1 TSL 1 (best) BASIC12.59□□□□□ -0.39
POLR2J2Q9GZM3 TMEM246-202ENST00000374848 4244 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
POLR2J2Q9GZM3 KCNJ14-202ENST00000391884 3990 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
POLR2J2Q9GZM3 DGKZ-216ENST00000528615 2692 ntTSL 5 BASIC12.59□□□□□ -0.39
POLR2J2Q9GZM3 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC12.59□□□□□ -0.39
POLR2J2Q9GZM3 PAX6-264ENST00000640125 1375 ntTSL 5 BASIC12.59□□□□□ -0.39
POLR2J2Q9GZM3 HNRNPLP1-201ENST00000421896 1501 ntBASIC12.59□□□□□ -0.39
POLR2J2Q9GZM3 SLC47A1-201ENST00000270570 3280 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
POLR2J2Q9GZM3 AC092117.1-201ENST00000621230 3250 ntBASIC12.59□□□□□ -0.39
POLR2J2Q9GZM3 EPB42-203ENST00000540029 2098 ntTSL 2 BASIC12.59□□□□□ -0.39
POLR2J2Q9GZM3 MAX-201ENST00000246163 897 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
POLR2J2Q9GZM3 HNRNPA1-201ENST00000330752 1294 ntTSL 5 BASIC12.59□□□□□ -0.39
POLR2J2Q9GZM3 CRYBA4-201ENST00000354760 811 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
POLR2J2Q9GZM3 C20orf141-201ENST00000380589 730 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
POLR2J2Q9GZM3 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
POLR2J2Q9GZM3 APOL3-207ENST00000424878 1240 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
POLR2J2Q9GZM3 AC254562.2-201ENST00000428786 667 ntTSL 3 BASIC12.59□□□□□ -0.39
POLR2J2Q9GZM3 EEF1DP2-201ENST00000433698 843 ntBASIC12.59□□□□□ -0.39
POLR2J2Q9GZM3 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC12.59□□□□□ -0.39
POLR2J2Q9GZM3 NAGK-204ENST00000443872 878 ntTSL 3 BASIC12.59□□□□□ -0.39
POLR2J2Q9GZM3 AL596276.2-201ENST00000447525 331 ntBASIC12.59□□□□□ -0.39
POLR2J2Q9GZM3 AC091804.1-201ENST00000486888 567 ntBASIC12.59□□□□□ -0.39
POLR2J2Q9GZM3 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
POLR2J2Q9GZM3 GTF2H2-204ENST00000517900 659 ntTSL 5 BASIC12.59□□□□□ -0.39
POLR2J2Q9GZM3 AC069185.1-202ENST00000533405 471 ntTSL 3 BASIC12.59□□□□□ -0.39
POLR2J2Q9GZM3 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC12.59□□□□□ -0.39
POLR2J2Q9GZM3 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
POLR2J2Q9GZM3 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
POLR2J2Q9GZM3 TSPO-206ENST00000583777 636 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
POLR2J2Q9GZM3 AC068675.1-201ENST00000588996 561 ntTSL 4 BASIC12.59□□□□□ -0.39
POLR2J2Q9GZM3 ZNF350-AS1-202ENST00000600253 577 ntTSL 4 BASIC12.59□□□□□ -0.39
POLR2J2Q9GZM3 AC008982.2-201ENST00000600473 493 ntTSL 5 BASIC12.59□□□□□ -0.39
POLR2J2Q9GZM3 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC12.59□□□□□ -0.39
POLR2J2Q9GZM3 LINC01783-202ENST00000614408 828 ntBASIC12.59□□□□□ -0.39
POLR2J2Q9GZM3 MIR6769A-201ENST00000617340 73 ntBASIC12.59□□□□□ -0.39
POLR2J2Q9GZM3 BX284668.2-205ENST00000619677 828 ntBASIC12.59□□□□□ -0.39
POLR2J2Q9GZM3 LINC00969-321ENST00000629990 806 ntTSL 5 BASIC12.59□□□□□ -0.39
POLR2J2Q9GZM3 LINC00869-206ENST00000610578 5734 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
POLR2J2Q9GZM3 ZWILCH-203ENST00000535141 2206 ntTSL 2 BASIC12.59□□□□□ -0.39
POLR2J2Q9GZM3 MKL1-212ENST00000618417 1842 ntTSL 5 BASIC12.59□□□□□ -0.39
POLR2J2Q9GZM3 C5orf56-206ENST00000612967 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
POLR2J2Q9GZM3 KIAA1614-AS1-201ENST00000415647 1440 ntTSL 2 BASIC12.59□□□□□ -0.39
POLR2J2Q9GZM3 SH2D3C-202ENST00000373276 3051 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
POLR2J2Q9GZM3 ZNF519-206ENST00000589498 2117 ntTSL 2 BASIC12.59□□□□□ -0.39
POLR2J2Q9GZM3 ARMCX2-202ENST00000330154 2663 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
POLR2J2Q9GZM3 C9orf170-201ENST00000623052 3239 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
POLR2J2Q9GZM3 KRT15-202ENST00000393974 3758 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
POLR2J2Q9GZM3 CCDC144NL-201ENST00000327925 2806 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
POLR2J2Q9GZM3 POLL-202ENST00000339310 2289 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
POLR2J2Q9GZM3 AC009336.2-201ENST00000468418 3521 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
POLR2J2Q9GZM3 DIO1-216ENST00000613679 1856 ntAPPRIS ALT1 TSL 5 BASIC12.59□□□□□ -0.39
POLR2J2Q9GZM3 POLDIP3-209ENST00000617178 2006 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
POLR2J2Q9GZM3 DGKD-202ENST00000409813 6228 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
POLR2J2Q9GZM3 ZBTB49-201ENST00000337872 2889 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
POLR2J2Q9GZM3 CELF4-217ENST00000591282 1461 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms