Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 KIR2DL3-201ENST00000342376 1590 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
LYSMD3Q7Z3D4 KCNIP2-203ENST00000348850 2089 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
LYSMD3Q7Z3D4 AL513497.1-201ENST00000624273 2083 ntBASIC13.7□□□□□ -0.22
LYSMD3Q7Z3D4 KIAA1161-201ENST00000297625 6398 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
LYSMD3Q7Z3D4 METAP1D-201ENST00000315796 3419 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
LYSMD3Q7Z3D4 SLC5A9-210ENST00000533824 2219 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
LYSMD3Q7Z3D4 AC073862.5-201ENST00000624129 2027 ntBASIC13.69□□□□□ -0.22
LYSMD3Q7Z3D4 CYP4F11-204ENST00000591841 2531 ntTSL 2 BASIC13.69□□□□□ -0.22
LYSMD3Q7Z3D4 FNTB-201ENST00000246166 2834 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
LYSMD3Q7Z3D4 ZNF277-201ENST00000361822 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
LYSMD3Q7Z3D4 VAPB-202ENST00000395802 1834 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
LYSMD3Q7Z3D4 ATP2C2-AS1-201ENST00000565700 2998 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
LYSMD3Q7Z3D4 RAPGEF3-205ENST00000449771 6061 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
LYSMD3Q7Z3D4 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
LYSMD3Q7Z3D4 PPIP5K1-209ENST00000420765 5718 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
LYSMD3Q7Z3D4 XPO7-201ENST00000252512 4861 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
LYSMD3Q7Z3D4 NCOA7-203ENST00000392477 6457 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
LYSMD3Q7Z3D4 GPN1-211ENST00000610189 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
LYSMD3Q7Z3D4 LPO-203ENST00000421678 2729 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
LYSMD3Q7Z3D4 VENTXP1-201ENST00000569334 2716 ntBASIC13.69□□□□□ -0.22
LYSMD3Q7Z3D4 CEP112-202ENST00000392769 3517 ntAPPRIS P4 TSL 5 BASIC13.69□□□□□ -0.22
LYSMD3Q7Z3D4 IL23A-201ENST00000228534 1046 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
LYSMD3Q7Z3D4 HPGD-201ENST00000296521 1171 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
LYSMD3Q7Z3D4 IFNA2-201ENST00000380206 1135 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
LYSMD3Q7Z3D4 IL18BP-206ENST00000393707 1037 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
LYSMD3Q7Z3D4 VCPKMT-201ENST00000395859 795 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
LYSMD3Q7Z3D4 ABCD1P4-201ENST00000399687 604 ntBASIC13.69□□□□□ -0.22
LYSMD3Q7Z3D4 VPREB1-202ENST00000403807 755 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
LYSMD3Q7Z3D4 SEPT7-AS1-201ENST00000412856 587 ntTSL 4 BASIC13.69□□□□□ -0.22
LYSMD3Q7Z3D4 AC041040.1-201ENST00000425197 460 ntBASIC13.69□□□□□ -0.22
LYSMD3Q7Z3D4 AC147651.3-201ENST00000429872 731 ntTSL 2 BASIC13.69□□□□□ -0.22
LYSMD3Q7Z3D4 POLR2H-203ENST00000430783 1159 ntTSL 2 BASIC13.69□□□□□ -0.22
LYSMD3Q7Z3D4 AL353658.1-201ENST00000436263 789 ntTSL 2 BASIC13.69□□□□□ -0.22
LYSMD3Q7Z3D4 GULOP-201ENST00000454030 748 ntBASIC13.69□□□□□ -0.22
LYSMD3Q7Z3D4 IKBKB-212ENST00000519735 1166 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
LYSMD3Q7Z3D4 CSTF3-206ENST00000524827 693 ntTSL 3 BASIC13.69□□□□□ -0.22
LYSMD3Q7Z3D4 ARL17B-203ENST00000570618 1140 ntTSL 2 BASIC13.69□□□□□ -0.22
LYSMD3Q7Z3D4 TMEM205-216ENST00000593256 792 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
LYSMD3Q7Z3D4 DBP-202ENST00000593500 712 ntTSL 2 BASIC13.69□□□□□ -0.22
LYSMD3Q7Z3D4 TBKBP1-201ENST00000361722 4121 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
LYSMD3Q7Z3D4 CCNE2-205ENST00000520509 3330 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
LYSMD3Q7Z3D4 ARAF-201ENST00000290277 2504 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
LYSMD3Q7Z3D4 PAX8-204ENST00000397647 3633 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
LYSMD3Q7Z3D4 HSD17B4-201ENST00000256216 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
LYSMD3Q7Z3D4 CPNE5-201ENST00000244751 3897 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
LYSMD3Q7Z3D4 CDCA3-202ENST00000422785 2760 ntTSL 2 BASIC13.69□□□□□ -0.22
LYSMD3Q7Z3D4 SSTR2-201ENST00000357585 7683 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
LYSMD3Q7Z3D4 B3GAT1-202ENST00000392580 3522 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
LYSMD3Q7Z3D4 WASHC5-202ENST00000517845 3667 ntTSL 2 BASIC13.69□□□□□ -0.22
LYSMD3Q7Z3D4 AL365181.1-201ENST00000564032 1828 ntBASIC13.69□□□□□ -0.22
LYSMD3Q7Z3D4 SUPT7L-203ENST00000405491 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
LYSMD3Q7Z3D4 KIAA0930-201ENST00000251993 2723 ntTSL 2 BASIC13.69□□□□□ -0.22
LYSMD3Q7Z3D4 MKRN1-201ENST00000255977 3151 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
LYSMD3Q7Z3D4 TRIB1-201ENST00000311922 3635 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
LYSMD3Q7Z3D4 HAGLR-202ENST00000416928 4235 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
LYSMD3Q7Z3D4 EHMT2-202ENST00000375530 3856 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
LYSMD3Q7Z3D4 PTCHD3-201ENST00000438700 2529 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
LYSMD3Q7Z3D4 NACC2-202ENST00000371753 6802 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
LYSMD3Q7Z3D4 NECAP2-202ENST00000443980 1929 ntTSL 2 BASIC13.68□□□□□ -0.22
LYSMD3Q7Z3D4 NME1-209ENST00000511355 1645 ntTSL 5 BASIC13.68□□□□□ -0.22
LYSMD3Q7Z3D4 CHMP7-201ENST00000313219 3367 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
LYSMD3Q7Z3D4 FOSB-212ENST00000592811 3089 ntTSL 2 BASIC13.68□□□□□ -0.22
LYSMD3Q7Z3D4 PPP1R8-202ENST00000311772 2344 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
LYSMD3Q7Z3D4 GCOM1-214ENST00000587652 2329 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
LYSMD3Q7Z3D4 MIR9-3HG-201ENST00000536780 4778 ntTSL 3 BASIC13.68□□□□□ -0.22
LYSMD3Q7Z3D4 C8B-201ENST00000371237 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
LYSMD3Q7Z3D4 CILP2-201ENST00000291495 4199 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
LYSMD3Q7Z3D4 UBA2-201ENST00000246548 4023 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
LYSMD3Q7Z3D4 FAM155B-201ENST00000252338 4013 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
LYSMD3Q7Z3D4 AOC1-204ENST00000467291 2857 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
LYSMD3Q7Z3D4 CFAP36-204ENST00000406691 1575 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
LYSMD3Q7Z3D4 COL18A1-AS1-201ENST00000397787 3425 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
LYSMD3Q7Z3D4 ELP2-221ENST00000542824 2288 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
LYSMD3Q7Z3D4 RTN3-210ENST00000540798 3124 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
LYSMD3Q7Z3D4 MPC1L-201ENST00000423387 571 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
LYSMD3Q7Z3D4 AC004837.1-201ENST00000446267 564 ntBASIC13.68□□□□□ -0.22
LYSMD3Q7Z3D4 AC018463.1-201ENST00000456674 917 ntBASIC13.68□□□□□ -0.22
LYSMD3Q7Z3D4 ATP1A4-205ENST00000470705 886 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
LYSMD3Q7Z3D4 AC108718.1-201ENST00000482382 554 ntTSL 4 BASIC13.68□□□□□ -0.22
LYSMD3Q7Z3D4 SNCB-203ENST00000506696 552 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
LYSMD3Q7Z3D4 PRSS55-203ENST00000522210 1005 ntTSL 2 BASIC13.68□□□□□ -0.22
LYSMD3Q7Z3D4 EHF-208ENST00000530286 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
LYSMD3Q7Z3D4 AC226150.1-201ENST00000544259 466 ntBASIC13.68□□□□□ -0.22
LYSMD3Q7Z3D4 RN7SL440P-201ENST00000577855 343 ntBASIC13.68□□□□□ -0.22
LYSMD3Q7Z3D4 MIR4750-201ENST00000584564 56 ntBASIC13.68□□□□□ -0.22
LYSMD3Q7Z3D4 AC136475.1-202ENST00000602429 1151 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
LYSMD3Q7Z3D4 AC107308.1-201ENST00000615897 301 ntBASIC13.68□□□□□ -0.22
LYSMD3Q7Z3D4 AP003419.4-201ENST00000616071 517 ntBASIC13.68□□□□□ -0.22
LYSMD3Q7Z3D4 AC002044.2-201ENST00000624910 970 ntBASIC13.68□□□□□ -0.22
LYSMD3Q7Z3D4 AC007666.1-201ENST00000443935 1838 ntTSL 5 BASIC13.68□□□□□ -0.22
LYSMD3Q7Z3D4 AC125611.4-201ENST00000553259 4166 ntTSL 2 BASIC13.68□□□□□ -0.22
LYSMD3Q7Z3D4 MYO9A-202ENST00000424560 4008 ntTSL 5 BASIC13.68□□□□□ -0.22
LYSMD3Q7Z3D4 NEK3-210ENST00000620675 2072 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
LYSMD3Q7Z3D4 CSNK1E-201ENST00000359867 2642 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
LYSMD3Q7Z3D4 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
LYSMD3Q7Z3D4 SERPINB6-206ENST00000380546 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
LYSMD3Q7Z3D4 AC090502.4-201ENST00000551714 1386 ntBASIC13.68□□□□□ -0.22
LYSMD3Q7Z3D4 ZNF333-209ENST00000601134 1392 ntTSL 5 BASIC13.68□□□□□ -0.22
LYSMD3Q7Z3D4 PIK3R6-204ENST00000619866 3041 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
LYSMD3Q7Z3D4 SPPL2A-201ENST00000261854 7372 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 48.3 ms