Protein–RNA interactions for Protein: P35125

USP6, Ubiquitin carboxyl-terminal hydrolase 6, humanhuman

Predictions only

Length 1,406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP6P35125 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
USP6P35125 GOLGA8DP-202ENST00000341390 2184 ntBASIC17.79■□□□□ 0.44
USP6P35125 HDGF-203ENST00000368209 2171 ntTSL 2 BASIC17.79■□□□□ 0.44
USP6P35125 EPS8L3-201ENST00000361852 2130 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
USP6P35125 TSPEAR-AS1-202ENST00000451035 2108 ntTSL 5 BASIC17.79■□□□□ 0.44
USP6P35125 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
USP6P35125 VRK3-205ENST00000593919 1979 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
USP6P35125 ALOX15P2-201ENST00000340858 1897 ntBASIC17.78■□□□□ 0.44
USP6P35125 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC17.78■□□□□ 0.44
USP6P35125 IFNAR2-201ENST00000342101 2606 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
USP6P35125 PIGG-205ENST00000503111 2629 ntTSL 2 BASIC17.78■□□□□ 0.44
USP6P35125 SOX30-203ENST00000519442 1666 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
USP6P35125 DNPEP-220ENST00000523282 1662 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
USP6P35125 ZNF772-203ENST00000425074 1601 ntTSL 2 BASIC17.78■□□□□ 0.44
USP6P35125 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
USP6P35125 RGS9-201ENST00000262406 2375 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
USP6P35125 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
USP6P35125 DRD3-204ENST00000467632 1554 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
USP6P35125 BX005132.1-201ENST00000641403 1580 ntBASIC17.78■□□□□ 0.44
USP6P35125 AC116903.2-201ENST00000561674 1304 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
USP6P35125 COX4I2-201ENST00000376075 693 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
USP6P35125 ATP5J-204ENST00000400093 1179 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
USP6P35125 TACR1-202ENST00000409848 1270 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
USP6P35125 AC104117.4-201ENST00000521486 847 ntBASIC17.78■□□□□ 0.44
USP6P35125 AC069503.1-201ENST00000538710 816 ntTSL 2 BASIC17.78■□□□□ 0.44
USP6P35125 ATP2A2-211ENST00000552636 529 ntTSL 4 BASIC17.78■□□□□ 0.44
USP6P35125 NAT9-204ENST00000578822 839 ntTSL 3 BASIC17.78■□□□□ 0.44
USP6P35125 OR3A1-202ENST00000615105 966 ntBASIC17.78■□□□□ 0.44
USP6P35125 LINC00923-208ENST00000621777 503 ntTSL 5 BASIC17.78■□□□□ 0.44
USP6P35125 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC17.78■□□□□ 0.44
USP6P35125 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
USP6P35125 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
USP6P35125 PRKD1-209ENST00000616995 3498 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
USP6P35125 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC17.78■□□□□ 0.44
USP6P35125 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
USP6P35125 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
USP6P35125 TSEN2-202ENST00000402228 2149 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
USP6P35125 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
USP6P35125 GSDMB-201ENST00000309481 1500 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
USP6P35125 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
USP6P35125 TAF11-202ENST00000420584 1465 ntTSL 2 BASIC17.77■□□□□ 0.44
USP6P35125 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
USP6P35125 SCAMP5-202ENST00000425597 3411 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
USP6P35125 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC17.77■□□□□ 0.44
USP6P35125 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
USP6P35125 ACR-201ENST00000216139 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
USP6P35125 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
USP6P35125 TRPV1-201ENST00000310522 2340 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
USP6P35125 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
USP6P35125 EVA1A-201ENST00000233712 1815 ntAPPRIS P2 TSL 2 BASIC17.77■□□□□ 0.44
USP6P35125 MPPE1-204ENST00000344987 1831 ntTSL 5 BASIC17.77■□□□□ 0.44
USP6P35125 HYLS1-201ENST00000356438 1810 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
USP6P35125 DHRS12-202ENST00000280056 1324 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
USP6P35125 IP6K2-211ENST00000432678 1309 ntTSL 2 BASIC17.77■□□□□ 0.44
USP6P35125 MSH2-206ENST00000543555 3024 ntTSL 2 BASIC17.77■□□□□ 0.44
USP6P35125 HRASLS2-201ENST00000255695 742 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
USP6P35125 OR52L1-201ENST00000332249 1094 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
USP6P35125 MIR1226-201ENST00000408658 75 ntBASIC17.77■□□□□ 0.44
USP6P35125 ALKBH2-202ENST00000429722 1159 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
USP6P35125 LINC01824-201ENST00000436082 528 ntTSL 4 BASIC17.77■□□□□ 0.44
USP6P35125 C3orf35-206ENST00000452017 513 ntAPPRIS P5 TSL 5 BASIC17.77■□□□□ 0.44
USP6P35125 RN7SKP195-201ENST00000516587 303 ntBASIC17.77■□□□□ 0.44
USP6P35125 AC124242.1-203ENST00000517747 817 ntTSL 3 BASIC17.77■□□□□ 0.44
USP6P35125 AC090589.3-201ENST00000524412 574 ntTSL 5 BASIC17.77■□□□□ 0.44
USP6P35125 SCGB1A1-202ENST00000534397 466 ntTSL 3 BASIC17.77■□□□□ 0.44
USP6P35125 AC007656.1-201ENST00000552238 573 ntTSL 4 BASIC17.77■□□□□ 0.44
USP6P35125 NPTN-205ENST00000563691 1214 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
USP6P35125 AC015818.3-201ENST00000583797 589 ntBASIC17.77■□□□□ 0.44
USP6P35125 AC116036.2-201ENST00000607592 462 ntBASIC17.77■□□□□ 0.44
USP6P35125 AL592295.4-201ENST00000636161 997 ntTSL 4 BASIC17.77■□□□□ 0.44
USP6P35125 SNHG28-201ENST00000368102 2501 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
USP6P35125 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
USP6P35125 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
USP6P35125 UCKL1-AS1-201ENST00000623569 3602 ntBASIC17.77■□□□□ 0.43
USP6P35125 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
USP6P35125 B4GALT4-201ENST00000359213 2385 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.43
USP6P35125 MLPH-202ENST00000338530 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
USP6P35125 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
USP6P35125 ZNF606-204ENST00000547828 2680 ntTSL 2 BASIC17.77■□□□□ 0.43
USP6P35125 CDC20P1-201ENST00000488829 1500 ntBASIC17.77■□□□□ 0.43
USP6P35125 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
USP6P35125 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
USP6P35125 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
USP6P35125 FP671120.1-201ENST00000623664 2498 ntTSL 2 BASIC17.76■□□□□ 0.43
USP6P35125 FP236383.1-201ENST00000623860 2498 ntTSL 2 BASIC17.76■□□□□ 0.43
USP6P35125 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
USP6P35125 CCDC149-208ENST00000635206 2362 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
USP6P35125 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC17.76■□□□□ 0.43
USP6P35125 ENOX1-201ENST00000261488 2982 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
USP6P35125 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
USP6P35125 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC17.76■□□□□ 0.43
USP6P35125 CD3G-202ENST00000392883 1179 ntTSL 5 BASIC17.76■□□□□ 0.43
USP6P35125 AACSP1-202ENST00000521412 1095 ntBASIC17.76■□□□□ 0.43
USP6P35125 SNHG21-205ENST00000561107 790 ntTSL 2 BASIC17.76■□□□□ 0.43
USP6P35125 AP001043.1-206ENST00000613045 730 ntTSL 5 BASIC17.76■□□□□ 0.43
USP6P35125 AC097634.2-201ENST00000615819 604 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
USP6P35125 AL450487.2-201ENST00000615934 407 ntBASIC17.76■□□□□ 0.43
USP6P35125 TMEM192-203ENST00000506087 2225 ntTSL 2 BASIC17.76■□□□□ 0.43
USP6P35125 TGM5-207ENST00000622115 2202 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
USP6P35125 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms