Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 SLC43A3-214ENST00000529554 2207 ntAPPRIS P3 TSL 2 BASIC12.41□□□□□ -0.42
NPIPA3F8WFD2 ALPL-206ENST00000539907 2241 ntTSL 2 BASIC12.41□□□□□ -0.42
NPIPA3F8WFD2 HSPA6-201ENST00000309758 2371 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
NPIPA3F8WFD2 CICP4-201ENST00000447359 2812 ntBASIC12.41□□□□□ -0.42
NPIPA3F8WFD2 NR3C2-203ENST00000358102 5893 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
NPIPA3F8WFD2 ATP12A-201ENST00000218548 3732 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
NPIPA3F8WFD2 SLC44A3-AS1-215ENST00000634870 5956 ntTSL 5 BASIC12.41□□□□□ -0.42
NPIPA3F8WFD2 SFXN3-201ENST00000224807 3089 ntTSL 5 BASIC12.41□□□□□ -0.42
NPIPA3F8WFD2 GFPT2-201ENST00000253778 3093 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
NPIPA3F8WFD2 COA6-203ENST00000366615 710 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
NPIPA3F8WFD2 PPP1R11-205ENST00000376772 1731 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
NPIPA3F8WFD2 IGLJ3-201ENST00000390324 176 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
NPIPA3F8WFD2 ZFP82-201ENST00000392161 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
NPIPA3F8WFD2 CCNG2-202ENST00000395640 1410 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
NPIPA3F8WFD2 GAPDH-204ENST00000396859 1256 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
NPIPA3F8WFD2 ORMDL1-204ENST00000409519 1223 ntTSL 3 BASIC12.41□□□□□ -0.42
NPIPA3F8WFD2 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
NPIPA3F8WFD2 LINP1-201ENST00000417112 917 ntTSL 2 BASIC12.41□□□□□ -0.42
NPIPA3F8WFD2 FAM21EP-201ENST00000417804 985 ntBASIC12.41□□□□□ -0.42
NPIPA3F8WFD2 KRT18P4-201ENST00000422599 1288 ntBASIC12.41□□□□□ -0.42
NPIPA3F8WFD2 AC093673.1-201ENST00000429630 648 ntTSL 2 BASIC12.41□□□□□ -0.42
NPIPA3F8WFD2 AC007279.1-201ENST00000448547 837 ntBASIC12.41□□□□□ -0.42
NPIPA3F8WFD2 AL355537.2-201ENST00000453367 375 ntTSL 2 BASIC12.41□□□□□ -0.42
NPIPA3F8WFD2 GULOP-201ENST00000454030 748 ntBASIC12.41□□□□□ -0.42
NPIPA3F8WFD2 LINC00892-203ENST00000454385 686 ntTSL 3 BASIC12.41□□□□□ -0.42
NPIPA3F8WFD2 BPIFB5P-201ENST00000457066 1099 ntBASIC12.41□□□□□ -0.42
NPIPA3F8WFD2 AC022028.2-201ENST00000474115 2619 ntTSL 2 BASIC12.41□□□□□ -0.42
NPIPA3F8WFD2 LINC02228-201ENST00000507600 534 ntTSL 2 BASIC12.41□□□□□ -0.42
NPIPA3F8WFD2 LINC02171-201ENST00000508619 1033 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
NPIPA3F8WFD2 OSBP2-219ENST00000535268 3248 ntTSL 2 BASIC12.41□□□□□ -0.42
NPIPA3F8WFD2 LINC01481-204ENST00000550216 494 ntTSL 2 BASIC12.41□□□□□ -0.42
NPIPA3F8WFD2 ATP2A1-AS1-201ENST00000561547 558 ntTSL 2 BASIC12.41□□□□□ -0.42
NPIPA3F8WFD2 ZNF821-214ENST00000565601 1858 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
NPIPA3F8WFD2 AL022344.2-201ENST00000568976 968 ntBASIC12.41□□□□□ -0.42
NPIPA3F8WFD2 LINC01569-203ENST00000573268 694 ntTSL 3 BASIC12.41□□□□□ -0.42
NPIPA3F8WFD2 MIR4326-201ENST00000582203 59 ntBASIC12.41□□□□□ -0.42
NPIPA3F8WFD2 AC005777.1-201ENST00000588332 187 ntBASIC12.41□□□□□ -0.42
NPIPA3F8WFD2 AC093567.1-201ENST00000590649 877 ntTSL 3 BASIC12.41□□□□□ -0.42
NPIPA3F8WFD2 AL356740.1-201ENST00000602192 1297 ntBASIC12.41□□□□□ -0.42
NPIPA3F8WFD2 AL160191.2-201ENST00000603975 601 ntBASIC12.41□□□□□ -0.42
NPIPA3F8WFD2 AC244250.3-201ENST00000620749 366 ntBASIC12.41□□□□□ -0.42
NPIPA3F8WFD2 GARS-210ENST00000627489 324 ntTSL 4 BASIC12.41□□□□□ -0.42
NPIPA3F8WFD2 GNL1-201ENST00000376621 7490 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
NPIPA3F8WFD2 ADCY7-201ENST00000254235 6138 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
NPIPA3F8WFD2 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
NPIPA3F8WFD2 YWHAZ-206ENST00000395957 5248 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
NPIPA3F8WFD2 NFATC4-207ENST00000553469 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
NPIPA3F8WFD2 AC013460.1-202ENST00000435062 2253 ntTSL 2 BASIC12.41□□□□□ -0.42
NPIPA3F8WFD2 AADAT-206ENST00000509167 2113 ntAPPRIS ALT1 TSL 1 (best) BASIC12.41□□□□□ -0.42
NPIPA3F8WFD2 GALC-201ENST00000261304 3883 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
NPIPA3F8WFD2 POLN-210ENST00000511885 3253 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
NPIPA3F8WFD2 MAD1L1-204ENST00000406869 2991 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
NPIPA3F8WFD2 GPHN-203ENST00000478722 4297 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
NPIPA3F8WFD2 AL109809.1-201ENST00000418979 1367 ntBASIC12.41□□□□□ -0.42
NPIPA3F8WFD2 RTL5-202ENST00000609883 4105 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
NPIPA3F8WFD2 AL513315.1-201ENST00000640756 1370 ntTSL 5 BASIC12.41□□□□□ -0.42
NPIPA3F8WFD2 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
NPIPA3F8WFD2 MRVI1-201ENST00000423302 6126 ntAPPRIS ALT2 TSL 2 BASIC12.41□□□□□ -0.42
NPIPA3F8WFD2 OPRL1-202ENST00000349451 3369 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
NPIPA3F8WFD2 YWHAE-201ENST00000264335 2211 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
NPIPA3F8WFD2 ABI2-213ENST00000424558 2240 ntTSL 2 BASIC12.41□□□□□ -0.42
NPIPA3F8WFD2 YTHDF2-201ENST00000373812 2925 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
NPIPA3F8WFD2 SPDYA-202ENST00000379579 1759 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
NPIPA3F8WFD2 NXF1-201ENST00000294172 2346 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
NPIPA3F8WFD2 CELF4-217ENST00000591282 1461 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
NPIPA3F8WFD2 TAGLN-207ENST00000532870 2166 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
NPIPA3F8WFD2 PSMC4-202ENST00000455878 1333 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
NPIPA3F8WFD2 SLC52A1-203ENST00000512825 2989 ntTSL 2 BASIC12.4□□□□□ -0.42
NPIPA3F8WFD2 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
NPIPA3F8WFD2 GP6-201ENST00000310373 2268 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
NPIPA3F8WFD2 C16orf82-201ENST00000418886 2268 ntAPPRIS ALT2 BASIC12.4□□□□□ -0.42
NPIPA3F8WFD2 SERPINH1-205ENST00000525876 2283 ntTSL 2 BASIC12.4□□□□□ -0.42
NPIPA3F8WFD2 LDB3-204ENST00000372066 1598 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
NPIPA3F8WFD2 RNF123-203ENST00000433785 1555 ntTSL 5 BASIC12.4□□□□□ -0.42
NPIPA3F8WFD2 NRADDP-202ENST00000641269 1585 ntBASIC12.4□□□□□ -0.42
NPIPA3F8WFD2 FAM230C-201ENST00000623511 1970 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
NPIPA3F8WFD2 AC004899.2-201ENST00000622993 3860 ntBASIC12.4□□□□□ -0.42
NPIPA3F8WFD2 CLOCK-211ENST00000513440 3580 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
NPIPA3F8WFD2 EPM2A-218ENST00000639465 2203 ntTSL 5 BASIC12.4□□□□□ -0.42
NPIPA3F8WFD2 DHX30-201ENST00000348968 3994 ntTSL 5 BASIC12.4□□□□□ -0.42
NPIPA3F8WFD2 PGLYRP3-201ENST00000290722 1173 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
NPIPA3F8WFD2 OR2K2-201ENST00000302681 1078 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
NPIPA3F8WFD2 FAM3B-201ENST00000357985 1088 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
NPIPA3F8WFD2 COPS7B-204ENST00000409091 806 ntTSL 5 BASIC12.4□□□□□ -0.42
NPIPA3F8WFD2 ID2-AS1-201ENST00000412712 953 ntTSL 5 BASIC12.4□□□□□ -0.42
NPIPA3F8WFD2 AL161733.1-201ENST00000421067 462 ntTSL 3 BASIC12.4□□□□□ -0.42
NPIPA3F8WFD2 PSAT1P2-201ENST00000426107 972 ntBASIC12.4□□□□□ -0.42
NPIPA3F8WFD2 AL512599.1-201ENST00000430724 685 ntBASIC12.4□□□□□ -0.42
NPIPA3F8WFD2 EMP1-203ENST00000431267 1039 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
NPIPA3F8WFD2 AL158166.1-201ENST00000433110 371 ntTSL 2 BASIC12.4□□□□□ -0.42
NPIPA3F8WFD2 AC106869.1-201ENST00000448713 577 ntTSL 4 BASIC12.4□□□□□ -0.42
NPIPA3F8WFD2 VENTXP4-201ENST00000449029 958 ntBASIC12.4□□□□□ -0.42
NPIPA3F8WFD2 AGPAT5P1-201ENST00000455855 1019 ntBASIC12.4□□□□□ -0.42
NPIPA3F8WFD2 AC063952.3-201ENST00000467756 308 ntBASIC12.4□□□□□ -0.42
NPIPA3F8WFD2 NAV2-AS2-201ENST00000533767 782 ntTSL 2 BASIC12.4□□□□□ -0.42
NPIPA3F8WFD2 AC130456.3-201ENST00000561762 633 ntTSL 3 BASIC12.4□□□□□ -0.42
NPIPA3F8WFD2 AP005212.2-201ENST00000584979 510 ntBASIC12.4□□□□□ -0.42
NPIPA3F8WFD2 AP000356.3-203ENST00000614808 601 ntTSL 3 BASIC12.4□□□□□ -0.42
NPIPA3F8WFD2 MIR8071-1-201ENST00000616769 65 ntBASIC12.4□□□□□ -0.42
NPIPA3F8WFD2 MIR8071-2-201ENST00000616772 65 ntBASIC12.4□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms