Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 PIGG-205ENST00000503111 2629 ntTSL 2 BASIC11.08□□□□□ -0.64
RAB40CQ96S21 GGTA1P-202ENST00000481534 3429 ntTSL 2 BASIC11.08□□□□□ -0.64
RAB40CQ96S21 SLC13A4-201ENST00000354042 2897 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
RAB40CQ96S21 MBOAT4-201ENST00000320542 1512 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
RAB40CQ96S21 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
RAB40CQ96S21 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
RAB40CQ96S21 ARF3-201ENST00000256682 4105 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
RAB40CQ96S21 ACSF3-201ENST00000317447 3664 ntAPPRIS P1 TSL 2 BASIC11.08□□□□□ -0.64
RAB40CQ96S21 AC048382.5-201ENST00000618330 3667 ntTSL 5 BASIC11.08□□□□□ -0.64
RAB40CQ96S21 ARHGAP30-201ENST00000368013 4394 ntAPPRIS P1 TSL 2 BASIC11.08□□□□□ -0.64
RAB40CQ96S21 MEIS2-215ENST00000559561 1442 ntAPPRIS ALT1 TSL 5 BASIC11.08□□□□□ -0.64
RAB40CQ96S21 AC138761.6-201ENST00000583997 1423 ntBASIC11.08□□□□□ -0.64
RAB40CQ96S21 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC11.08□□□□□ -0.64
RAB40CQ96S21 FXYD3-208ENST00000604404 1322 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
RAB40CQ96S21 MIER2-201ENST00000264819 6884 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
RAB40CQ96S21 SRRM2-AS1-201ENST00000382313 3523 ntTSL 2 BASIC11.08□□□□□ -0.64
RAB40CQ96S21 HK3-201ENST00000292432 3066 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
RAB40CQ96S21 DPP9-214ENST00000598800 3098 ntTSL 5 BASIC11.07□□□□□ -0.64
RAB40CQ96S21 TNRC6B-203ENST00000402203 3444 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
RAB40CQ96S21 PCDHB2-201ENST00000194155 4126 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
RAB40CQ96S21 APLP2-202ENST00000278756 3687 ntAPPRIS ALT2 TSL 2 BASIC11.07□□□□□ -0.64
RAB40CQ96S21 FBLN1-208ENST00000442170 2531 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
RAB40CQ96S21 RP1-207ENST00000637698 6177 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
RAB40CQ96S21 KCNMA1-208ENST00000372440 3849 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
RAB40CQ96S21 KCNMA1-227ENST00000638203 3840 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
RAB40CQ96S21 KCNMA1-232ENST00000638306 3811 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
RAB40CQ96S21 KCNMA1-233ENST00000638351 3849 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
RAB40CQ96S21 CPT1C-217ENST00000598293 2767 ntAPPRIS P3 TSL 2 BASIC11.07□□□□□ -0.64
RAB40CQ96S21 HCN3-201ENST00000368358 3718 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
RAB40CQ96S21 SMAD1-215ENST00000515385 2085 ntAPPRIS P1 TSL 2 BASIC11.07□□□□□ -0.64
RAB40CQ96S21 TXNRD1-214ENST00000526691 3974 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
RAB40CQ96S21 TGM7-201ENST00000452443 2313 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
RAB40CQ96S21 CCNH-201ENST00000256897 1378 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
RAB40CQ96S21 POLR1C-203ENST00000372389 1355 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
RAB40CQ96S21 NDRG1-222ENST00000522476 1385 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
RAB40CQ96S21 APOBR-201ENST00000431282 3765 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
RAB40CQ96S21 TRIM80P-201ENST00000455685 2848 ntBASIC11.07□□□□□ -0.64
RAB40CQ96S21 FTO-214ENST00000636218 2227 ntTSL 5 BASIC11.07□□□□□ -0.64
RAB40CQ96S21 WWP2-202ENST00000359154 4515 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
RAB40CQ96S21 PARP3-202ENST00000417220 2472 ntAPPRIS P3 TSL 5 BASIC11.07□□□□□ -0.64
RAB40CQ96S21 AL450468.2-201ENST00000565955 1889 ntBASIC11.07□□□□□ -0.64
RAB40CQ96S21 GOLGA8T-202ENST00000569052 1896 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
RAB40CQ96S21 SSBP1-201ENST00000265304 687 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
RAB40CQ96S21 BCL2L11-202ENST00000337565 720 ntTSL 5 BASIC11.07□□□□□ -0.64
RAB40CQ96S21 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
RAB40CQ96S21 IGF2-201ENST00000381389 1023 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
RAB40CQ96S21 BOLA2P3-201ENST00000404566 256 ntBASIC11.07□□□□□ -0.64
RAB40CQ96S21 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC11.07□□□□□ -0.64
RAB40CQ96S21 AC006987.1-201ENST00000413610 527 ntBASIC11.07□□□□□ -0.64
RAB40CQ96S21 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
RAB40CQ96S21 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC11.07□□□□□ -0.64
RAB40CQ96S21 AC234783.1-201ENST00000441761 496 ntBASIC11.07□□□□□ -0.64
RAB40CQ96S21 ARMCX3-AS1-201ENST00000454228 490 ntTSL 3 BASIC11.07□□□□□ -0.64
RAB40CQ96S21 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC11.07□□□□□ -0.64
RAB40CQ96S21 CROCCP4-201ENST00000457096 498 ntBASIC11.07□□□□□ -0.64
RAB40CQ96S21 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
RAB40CQ96S21 KRT17P8-201ENST00000540749 863 ntBASIC11.07□□□□□ -0.64
RAB40CQ96S21 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC11.07□□□□□ -0.64
RAB40CQ96S21 AC068152.1-205ENST00000575173 1081 ntTSL 3 BASIC11.07□□□□□ -0.64
RAB40CQ96S21 POLR2E-204ENST00000586746 1096 ntAPPRIS P1 TSL 3 BASIC11.07□□□□□ -0.64
RAB40CQ96S21 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
RAB40CQ96S21 AL356417.2-202ENST00000608986 532 ntTSL 3 BASIC11.07□□□□□ -0.64
RAB40CQ96S21 ZCCHC4-206ENST00000612982 938 ntTSL 5 BASIC11.07□□□□□ -0.64
RAB40CQ96S21 Metazoa_SRP.141-201ENST00000615072 282 ntBASIC11.07□□□□□ -0.64
RAB40CQ96S21 AL162274.1-201ENST00000617191 1098 ntBASIC11.07□□□□□ -0.64
RAB40CQ96S21 MYH3-205ENST00000583535 6037 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
RAB40CQ96S21 BCL2L1-202ENST00000376055 2383 ntTSL 2 BASIC11.07□□□□□ -0.64
RAB40CQ96S21 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
RAB40CQ96S21 AC138761.4-201ENST00000578881 1514 ntTSL 3 BASIC11.07□□□□□ -0.64
RAB40CQ96S21 ATF6B-209ENST00000375201 2624 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
RAB40CQ96S21 ATF6B-210ENST00000375203 2620 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
RAB40CQ96S21 DLGAP2-214ENST00000612087 10088 ntAPPRIS P2 TSL 5 BASIC11.07□□□□□ -0.64
RAB40CQ96S21 MEP1A-201ENST00000230588 2892 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
RAB40CQ96S21 HAS3-202ENST00000306560 4220 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
RAB40CQ96S21 BUB1B-PAK6-201ENST00000441369 2767 ntAPPRIS P1 TSL 2 BASIC11.07□□□□□ -0.64
RAB40CQ96S21 SLC47A1-206ENST00000571335 1415 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
RAB40CQ96S21 CDC20-201ENST00000310955 1675 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
RAB40CQ96S21 LINC01993-201ENST00000374945 2934 ntTSL 2 BASIC11.07□□□□□ -0.64
RAB40CQ96S21 NRROS-201ENST00000328557 2564 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
RAB40CQ96S21 RABGAP1L-207ENST00000367690 1815 ntTSL 2 BASIC11.07□□□□□ -0.64
RAB40CQ96S21 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC11.07□□□□□ -0.64
RAB40CQ96S21 MYO9B-201ENST00000397274 7532 ntTSL 5 BASIC11.07□□□□□ -0.64
RAB40CQ96S21 USP38-201ENST00000307017 7009 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
RAB40CQ96S21 CFAP65-204ENST00000410037 2703 ntAPPRIS ALT2 TSL 2 BASIC11.07□□□□□ -0.64
RAB40CQ96S21 AC099786.2-201ENST00000427892 2203 ntTSL 2 BASIC11.07□□□□□ -0.64
RAB40CQ96S21 LINC01973-201ENST00000374983 4678 ntTSL 2 BASIC11.06□□□□□ -0.64
RAB40CQ96S21 NCDN-203ENST00000373253 3677 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
RAB40CQ96S21 GNG4-204ENST00000450593 4978 ntAPPRIS P1 TSL 4 BASIC11.06□□□□□ -0.64
RAB40CQ96S21 YIPF1-201ENST00000072644 1858 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
RAB40CQ96S21 CNBP-207ENST00000502976 1626 ntAPPRIS ALT1 TSL 1 (best) BASIC11.06□□□□□ -0.64
RAB40CQ96S21 FAM86C1-201ENST00000346333 2010 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
RAB40CQ96S21 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
RAB40CQ96S21 PPP1R8-201ENST00000236412 2414 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
RAB40CQ96S21 GALNT15-203ENST00000437509 2416 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
RAB40CQ96S21 DDR1-225ENST00000376568 3894 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
RAB40CQ96S21 NALCN-AS1-201ENST00000457843 2846 ntTSL 2 BASIC11.06□□□□□ -0.64
RAB40CQ96S21 EPB41L1-206ENST00000373950 3631 ntTSL 5 BASIC11.06□□□□□ -0.64
RAB40CQ96S21 PISD-203ENST00000397500 2194 ntTSL 5 BASIC11.06□□□□□ -0.64
RAB40CQ96S21 CLCN4-203ENST00000421085 6534 ntTSL 5 BASIC11.06□□□□□ -0.64
RAB40CQ96S21 TMED7-201ENST00000456936 3757 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Retrieved 100 of 98,524 protein–RNA pairs in 54 ms