Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 TP53I3-203ENST00000407482 747 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
RAE1P78406 AC003958.1-201ENST00000435883 421 ntBASIC12.83□□□□□ -0.36
RAE1P78406 AL353658.1-201ENST00000436263 789 ntTSL 2 BASIC12.83□□□□□ -0.36
RAE1P78406 AL662797.1-201ENST00000442852 799 ntTSL 3 BASIC12.83□□□□□ -0.36
RAE1P78406 AC133961.1-201ENST00000503085 762 ntTSL 3 BASIC12.83□□□□□ -0.36
RAE1P78406 NUDCD2-202ENST00000517501 448 ntTSL 5 BASIC12.83□□□□□ -0.36
RAE1P78406 AHNAK-205ENST00000530124 701 ntAPPRIS ALT2 TSL 3 BASIC12.83□□□□□ -0.36
RAE1P78406 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC12.83□□□□□ -0.36
RAE1P78406 MIR4687-201ENST00000583618 80 ntBASIC12.83□□□□□ -0.36
RAE1P78406 AC003043.1-201ENST00000588260 337 ntTSL 3 BASIC12.83□□□□□ -0.36
RAE1P78406 AC026304.1-201ENST00000597953 561 ntBASIC12.83□□□□□ -0.36
RAE1P78406 AP000356.3-203ENST00000614808 601 ntTSL 3 BASIC12.83□□□□□ -0.36
RAE1P78406 SMYD5-209ENST00000629411 246 ntTSL 5 BASIC12.83□□□□□ -0.36
RAE1P78406 HELLS-212ENST00000630929 400 ntTSL 5 BASIC12.83□□□□□ -0.36
RAE1P78406 ALDOA-229ENST00000636698 420 ntTSL 3 BASIC12.83□□□□□ -0.36
RAE1P78406 PLOD2-202ENST00000360060 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
RAE1P78406 C1QTNF1-203ENST00000354124 2714 ntAPPRIS P1 TSL 4 BASIC12.83□□□□□ -0.36
RAE1P78406 SGMS1-202ENST00000361781 3744 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
RAE1P78406 SRP54-201ENST00000216774 2279 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
RAE1P78406 PRIMPOL-201ENST00000314970 2289 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
RAE1P78406 CLEC10A-202ENST00000416562 1646 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
RAE1P78406 POLD1-205ENST00000595904 3402 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
RAE1P78406 ADAM11-201ENST00000200557 4571 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
RAE1P78406 OASL-202ENST00000339275 1492 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
RAE1P78406 KIAA1958-202ENST00000374244 2643 ntAPPRIS ALT1 TSL 5 BASIC12.83□□□□□ -0.36
RAE1P78406 AP000229.1-201ENST00000608591 1979 ntTSL 4 BASIC12.83□□□□□ -0.36
RAE1P78406 ST6GAL1-201ENST00000169298 4645 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
RAE1P78406 LRCH3-203ENST00000425562 2970 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
RAE1P78406 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
RAE1P78406 ARL8B-202ENST00000419534 1684 ntTSL 2 BASIC12.83□□□□□ -0.36
RAE1P78406 MAX-212ENST00000555932 1673 ntTSL 5 BASIC12.83□□□□□ -0.36
RAE1P78406 GLB1L-203ENST00000409640 2042 ntTSL 2 BASIC12.83□□□□□ -0.36
RAE1P78406 LUC7L2-208ENST00000541170 1525 ntTSL 2 BASIC12.83□□□□□ -0.36
RAE1P78406 DMBT1P1-203ENST00000636837 4628 ntBASIC12.82□□□□□ -0.36
RAE1P78406 SNHG1-213ENST00000540725 1374 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
RAE1P78406 HTR5A-201ENST00000287907 2912 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
RAE1P78406 CTAGE10P-201ENST00000318353 2408 ntBASIC12.82□□□□□ -0.36
RAE1P78406 HNRNPUL1-207ENST00000595018 2794 ntTSL 2 BASIC12.82□□□□□ -0.36
RAE1P78406 KRT18P40-201ENST00000599859 1571 ntBASIC12.82□□□□□ -0.36
RAE1P78406 EDNRB-204ENST00000626030 1571 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
RAE1P78406 CNTNAP2-207ENST00000628930 1944 ntTSL 2 BASIC12.82□□□□□ -0.36
RAE1P78406 USP51-201ENST00000500968 4407 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
RAE1P78406 GTF2I-215ENST00000614986 4415 ntAPPRIS ALT1 TSL 1 (best) BASIC12.82□□□□□ -0.36
RAE1P78406 GTF2I-221ENST00000621734 4412 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
RAE1P78406 ARHGEF9-235ENST00000637723 2146 ntTSL 5 BASIC12.82□□□□□ -0.36
RAE1P78406 AC092115.1-201ENST00000566277 1402 ntBASIC12.82□□□□□ -0.36
RAE1P78406 ELMOD3-201ENST00000315658 2685 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
RAE1P78406 ZFYVE27-205ENST00000370613 2669 ntTSL 2 BASIC12.82□□□□□ -0.36
RAE1P78406 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
RAE1P78406 POLR2G-201ENST00000301788 827 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
RAE1P78406 IGHV3-21-201ENST00000390607 430 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
RAE1P78406 GAPDH-204ENST00000396859 1256 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
RAE1P78406 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
RAE1P78406 DMKN-204ENST00000408915 600 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
RAE1P78406 SEPT7-AS1-201ENST00000412856 587 ntTSL 4 BASIC12.82□□□□□ -0.36
RAE1P78406 FTCDNL1-203ENST00000420922 772 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
RAE1P78406 AC024028.1-201ENST00000437145 437 ntTSL 3 BASIC12.82□□□□□ -0.36
RAE1P78406 IL1R2-203ENST00000441002 1106 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
RAE1P78406 AC096649.1-201ENST00000449168 497 ntTSL 3 BASIC12.82□□□□□ -0.36
RAE1P78406 AC006529.1-201ENST00000459978 637 ntBASIC12.82□□□□□ -0.36
RAE1P78406 RN7SL769P-201ENST00000469386 295 ntBASIC12.82□□□□□ -0.36
RAE1P78406 LINC00173-201ENST00000470091 435 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
RAE1P78406 AC130709.1-201ENST00000484779 1212 ntBASIC12.82□□□□□ -0.36
RAE1P78406 RNA5SP406-201ENST00000516106 112 ntBASIC12.82□□□□□ -0.36
RAE1P78406 NOP2-211ENST00000540228 668 ntTSL 2 BASIC12.82□□□□□ -0.36
RAE1P78406 AL845331.2-201ENST00000561882 1044 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
RAE1P78406 TMEM231-206ENST00000565067 1078 ntTSL 5 BASIC12.82□□□□□ -0.36
RAE1P78406 C19orf25-205ENST00000588427 853 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
RAE1P78406 MFSD11-218ENST00000591864 446 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
RAE1P78406 AC005041.3-201ENST00000606287 649 ntBASIC12.82□□□□□ -0.36
RAE1P78406 HIST1H3F-201ENST00000618052 411 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
RAE1P78406 TNFRSF8-201ENST00000263932 3686 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
RAE1P78406 FOSB-203ENST00000443841 3346 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
RAE1P78406 TMEM30A-203ENST00000475111 2791 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
RAE1P78406 AC099786.2-201ENST00000427892 2203 ntTSL 2 BASIC12.82□□□□□ -0.36
RAE1P78406 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
RAE1P78406 ABCC4-206ENST00000536256 2840 ntTSL 2 BASIC12.82□□□□□ -0.36
RAE1P78406 ZNF410-201ENST00000324593 2293 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
RAE1P78406 AC009690.1-201ENST00000379915 4374 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
RAE1P78406 LPCAT4-209ENST00000617710 1719 ntTSL 5 BASIC12.82□□□□□ -0.36
RAE1P78406 PEX5-201ENST00000266563 3252 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
RAE1P78406 NAGK-202ENST00000418807 2343 ntTSL 5 BASIC12.82□□□□□ -0.36
RAE1P78406 PRKAB1-206ENST00000541640 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
RAE1P78406 FAM156B-201ENST00000416841 2537 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
RAE1P78406 CSF2RB-202ENST00000403662 4863 ntAPPRIS P2 TSL 5 BASIC12.82□□□□□ -0.36
RAE1P78406 HERPUD1-202ENST00000344114 1388 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
RAE1P78406 MCF2L-213ENST00000421756 3560 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
RAE1P78406 TRPM4-202ENST00000427978 3444 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
RAE1P78406 ATG7-213ENST00000446450 2042 ntTSL 2 BASIC12.81□□□□□ -0.36
RAE1P78406 CTBP1-AS2-206ENST00000581398 5652 ntBASIC12.81□□□□□ -0.36
RAE1P78406 TXNDC9-201ENST00000264255 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
RAE1P78406 HSD17B4-201ENST00000256216 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
RAE1P78406 CARS-AS1-201ENST00000499962 2664 ntTSL 2 BASIC12.81□□□□□ -0.36
RAE1P78406 UBE2V1-222ENST00000557021 2258 ntTSL 5 BASIC12.81□□□□□ -0.36
RAE1P78406 AC092053.3-201ENST00000641308 4975 ntBASIC12.81□□□□□ -0.36
RAE1P78406 SLC16A2-201ENST00000587091 4161 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
RAE1P78406 FBXL19-201ENST00000338343 3965 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
RAE1P78406 SOX30-203ENST00000519442 1666 ntAPPRIS ALT2 TSL 2 BASIC12.81□□□□□ -0.36
RAE1P78406 ZBTB47-201ENST00000232974 3781 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
RAE1P78406 USP3-204ENST00000540797 5474 ntTSL 2 BASIC12.81□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 47.6 ms