Protein–RNA interactions for Protein: P45452

MMP13, Collagenase 3, humanhuman

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP13P45452 RP1L1-202ENST00000382483 7973 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
MMP13P45452 SEMA3F-201ENST00000002829 3802 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
MMP13P45452 ALKBH1-201ENST00000216489 2594 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
MMP13P45452 CNTROB-203ENST00000565740 2783 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
MMP13P45452 TNS2-219ENST00000552570 4714 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
MMP13P45452 PAX3-205ENST00000392069 3170 ntTSL 5 BASIC14.16□□□□□ -0.14
MMP13P45452 EPHA1-201ENST00000275815 3363 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
MMP13P45452 TNFRSF21-201ENST00000296861 3595 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
MMP13P45452 PDXDC2P-206ENST00000534700 1315 ntBASIC14.15□□□□□ -0.14
MMP13P45452 ALDOA-202ENST00000395240 1447 ntAPPRIS ALT1 TSL 5 BASIC14.15□□□□□ -0.14
MMP13P45452 PASK-201ENST00000234040 4572 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
MMP13P45452 CLASP2-218ENST00000487200 1940 ntTSL 2 BASIC14.15□□□□□ -0.14
MMP13P45452 CD22-209ENST00000594250 2107 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
MMP13P45452 CATSPERD-202ENST00000381624 2516 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
MMP13P45452 SYT12-201ENST00000393946 4534 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
MMP13P45452 NTNG1-204ENST00000370067 4628 ntTSL 5 BASIC14.15□□□□□ -0.14
MMP13P45452 TNS2-203ENST00000379902 4737 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
MMP13P45452 MAP7D3-201ENST00000316077 4567 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
MMP13P45452 COX7A2L-202ENST00000378669 3056 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
MMP13P45452 SULT2A1-201ENST00000222002 1987 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
MMP13P45452 BSCL2-206ENST00000405837 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
MMP13P45452 GOLGA8UP-201ENST00000527159 1755 ntBASIC14.15□□□□□ -0.14
MMP13P45452 HNRNPMP1-201ENST00000560685 1768 ntBASIC14.15□□□□□ -0.14
MMP13P45452 RNF123-203ENST00000433785 1555 ntTSL 5 BASIC14.15□□□□□ -0.14
MMP13P45452 POLD4-201ENST00000312419 918 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
MMP13P45452 GSG1L-201ENST00000380897 1173 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
MMP13P45452 RPS9-204ENST00000391753 709 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
MMP13P45452 LINC01006-202ENST00000418309 640 ntTSL 3 BASIC14.15□□□□□ -0.14
MMP13P45452 ERP29P1-201ENST00000442902 706 ntBASIC14.15□□□□□ -0.14
MMP13P45452 AC018638.5-201ENST00000450885 754 ntBASIC14.15□□□□□ -0.14
MMP13P45452 DCST1-AS1-201ENST00000452962 822 ntTSL 2 BASIC14.15□□□□□ -0.14
MMP13P45452 MYLK-AS1-202ENST00000470449 760 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
MMP13P45452 POLD4-206ENST00000530584 899 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
MMP13P45452 POLD4-208ENST00000532830 904 ntTSL 3 BASIC14.15□□□□□ -0.14
MMP13P45452 LINC02369-202ENST00000540745 801 ntTSL 5 BASIC14.15□□□□□ -0.14
MMP13P45452 LINC01500-204ENST00000556815 752 ntTSL 3 BASIC14.15□□□□□ -0.14
MMP13P45452 AC105129.2-201ENST00000559536 390 ntBASIC14.15□□□□□ -0.14
MMP13P45452 TPM1-223ENST00000560445 485 ntTSL 3 BASIC14.15□□□□□ -0.14
MMP13P45452 LINC01233-203ENST00000601708 494 ntTSL 3 BASIC14.15□□□□□ -0.14
MMP13P45452 GLIDR-205ENST00000640674 884 ntTSL 5 BASIC14.15□□□□□ -0.14
MMP13P45452 INPP5J-208ENST00000412277 3512 ntTSL 2 BASIC14.15□□□□□ -0.14
MMP13P45452 CPN2-201ENST00000323830 3028 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
MMP13P45452 IP6K3-201ENST00000293756 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
MMP13P45452 ANKRD30B-202ENST00000358984 4359 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
MMP13P45452 AC011700.1-201ENST00000610409 2627 ntBASIC14.15□□□□□ -0.14
MMP13P45452 WDR60-202ENST00000407559 3769 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
MMP13P45452 SFTPA1-202ENST00000419470 2210 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
MMP13P45452 TLN2-202ENST00000472902 2116 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
MMP13P45452 ZKSCAN2-201ENST00000328086 7523 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
MMP13P45452 GLB1L-203ENST00000409640 2042 ntTSL 2 BASIC14.15□□□□□ -0.14
MMP13P45452 ARHGAP25-216ENST00000497079 1843 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
MMP13P45452 ZSWIM3-201ENST00000255152 2773 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
MMP13P45452 FMR1-215ENST00000616382 1648 ntTSL 5 BASIC14.15□□□□□ -0.14
MMP13P45452 KCNH4-202ENST00000607371 3723 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
MMP13P45452 SEC13-202ENST00000350697 1425 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
MMP13P45452 EEF2KMT-201ENST00000427587 2390 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
MMP13P45452 PWWP2A-202ENST00000456329 3991 ntTSL 1 (best) BASIC14.15□□□□□ -0.15
MMP13P45452 NOP2-212ENST00000541778 3038 ntTSL 2 BASIC14.15□□□□□ -0.15
MMP13P45452 ZFYVE27-201ENST00000337540 2927 ntTSL 2 BASIC14.14□□□□□ -0.15
MMP13P45452 TMPRSS4-213ENST00000522824 2052 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
MMP13P45452 TRIM80P-201ENST00000455685 2848 ntBASIC14.14□□□□□ -0.15
MMP13P45452 C15orf39-207ENST00000567617 4249 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
MMP13P45452 SPATS2-201ENST00000321898 3158 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
MMP13P45452 DPP9-214ENST00000598800 3098 ntTSL 5 BASIC14.14□□□□□ -0.15
MMP13P45452 DDX19B-202ENST00000355992 1692 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
MMP13P45452 AC239809.3-201ENST00000599640 4266 ntTSL 5 BASIC14.14□□□□□ -0.15
MMP13P45452 CSF3-204ENST00000394149 1583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
MMP13P45452 INPP5J-201ENST00000331075 3347 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
MMP13P45452 NDUFB6-203ENST00000379847 1366 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
MMP13P45452 ITFG2-201ENST00000228799 2361 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
MMP13P45452 RPP40-201ENST00000319533 1088 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
MMP13P45452 RPAIN-201ENST00000327154 815 ntTSL 2 BASIC14.14□□□□□ -0.15
MMP13P45452 MIR1307-201ENST00000408840 149 ntBASIC14.14□□□□□ -0.15
MMP13P45452 RPL3P2-204ENST00000413027 1203 ntBASIC14.14□□□□□ -0.15
MMP13P45452 AC092573.1-201ENST00000433054 884 ntBASIC14.14□□□□□ -0.15
MMP13P45452 AL627422.1-201ENST00000434104 580 ntBASIC14.14□□□□□ -0.15
MMP13P45452 AL391415.1-201ENST00000439844 400 ntTSL 3 BASIC14.14□□□□□ -0.15
MMP13P45452 UBXN7-AS1-201ENST00000442941 386 ntTSL 3 BASIC14.14□□□□□ -0.15
MMP13P45452 LINC02046-201ENST00000469812 378 ntTSL 3 BASIC14.14□□□□□ -0.15
MMP13P45452 RN7SL81P-201ENST00000493781 261 ntBASIC14.14□□□□□ -0.15
MMP13P45452 APOC1P1-201ENST00000507983 630 ntTSL 4 BASIC14.14□□□□□ -0.15
MMP13P45452 TMEM231-206ENST00000565067 1078 ntTSL 5 BASIC14.14□□□□□ -0.15
MMP13P45452 AL031282.1-201ENST00000577672 409 ntTSL 3 BASIC14.14□□□□□ -0.15
MMP13P45452 AC015917.2-201ENST00000580714 493 ntTSL 3 BASIC14.14□□□□□ -0.15
MMP13P45452 AC079336.4-201ENST00000584219 408 ntTSL 2 BASIC14.14□□□□□ -0.15
MMP13P45452 AP005264.5-201ENST00000590066 467 ntBASIC14.14□□□□□ -0.15
MMP13P45452 MFSD11-218ENST00000591864 446 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
MMP13P45452 AL049840.2-201ENST00000602722 535 ntBASIC14.14□□□□□ -0.15
MMP13P45452 DUSP22-213ENST00000605035 1231 ntTSL 2 BASIC14.14□□□□□ -0.15
MMP13P45452 AC005632.3-201ENST00000605544 308 ntBASIC14.14□□□□□ -0.15
MMP13P45452 AC242426.4-201ENST00000606856 573 ntTSL 5 BASIC14.14□□□□□ -0.15
MMP13P45452 LINC01746-201ENST00000621390 449 ntTSL 3 BASIC14.14□□□□□ -0.15
MMP13P45452 AC008764.8-201ENST00000623966 2717 ntBASIC14.14□□□□□ -0.15
MMP13P45452 OPA1-205ENST00000361908 6439 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
MMP13P45452 DHX30-201ENST00000348968 3994 ntTSL 5 BASIC14.14□□□□□ -0.15
MMP13P45452 OXNAD1-202ENST00000435829 1643 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
MMP13P45452 CWC27-201ENST00000381070 2078 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
MMP13P45452 OSBPL2-203ENST00000439951 3886 ntTSL 5 BASIC14.14□□□□□ -0.15
MMP13P45452 CYFIP2-219ENST00000616178 4210 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
MMP13P45452 ZMIZ1-AS1-203ENST00000456353 2878 ntTSL 2 BASIC14.14□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 69.5 ms