Protein–RNA interactions for Protein: P12004

PCNA, Proliferating cell nuclear antigen, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNAP12004 DNAJC14-202ENST00000317287 2774 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
PCNAP12004 AL021155.1-201ENST00000438808 2637 ntBASIC13.34□□□□□ -0.27
PCNAP12004 ZNF71-201ENST00000328070 5428 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
PCNAP12004 TMC5-204ENST00000541464 3581 ntTSL 2 BASIC13.34□□□□□ -0.27
PCNAP12004 AC073862.5-201ENST00000624129 2027 ntBASIC13.34□□□□□ -0.27
PCNAP12004 TESPA1-201ENST00000316577 1898 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
PCNAP12004 AL353608.3-202ENST00000429953 4384 ntTSL 5 BASIC13.34□□□□□ -0.27
PCNAP12004 GOLGA8T-202ENST00000569052 1896 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
PCNAP12004 DDX46-212ENST00000628477 1584 ntTSL 5 BASIC13.34□□□□□ -0.27
PCNAP12004 TOE1-201ENST00000372090 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
PCNAP12004 ALDOA-202ENST00000395240 1447 ntAPPRIS ALT1 TSL 5 BASIC13.34□□□□□ -0.27
PCNAP12004 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
PCNAP12004 MAPK13-202ENST00000373759 1036 ntTSL 5 BASIC13.34□□□□□ -0.27
PCNAP12004 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
PCNAP12004 PTTG1IP-202ENST00000397886 755 ntTSL 4 BASIC13.34□□□□□ -0.27
PCNAP12004 PHACTR2-204ENST00000397980 745 ntTSL 3 BASIC13.34□□□□□ -0.27
PCNAP12004 AL807761.2-201ENST00000422849 729 ntBASIC13.34□□□□□ -0.27
PCNAP12004 GS1-124K5.4-201ENST00000445681 540 ntTSL 2 BASIC13.34□□□□□ -0.27
PCNAP12004 AC007279.1-201ENST00000448547 837 ntBASIC13.34□□□□□ -0.27
PCNAP12004 RPL18AP8-201ENST00000486071 528 ntBASIC13.34□□□□□ -0.27
PCNAP12004 AC087269.1-202ENST00000519147 400 ntTSL 3 BASIC13.34□□□□□ -0.27
PCNAP12004 MRPL48-210ENST00000542303 661 ntTSL 3 BASIC13.34□□□□□ -0.27
PCNAP12004 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC13.34□□□□□ -0.27
PCNAP12004 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC13.34□□□□□ -0.27
PCNAP12004 AP007216.2-201ENST00000562094 299 ntTSL 3 BASIC13.34□□□□□ -0.27
PCNAP12004 AC110285.1-205ENST00000572301 559 ntTSL 3 BASIC13.34□□□□□ -0.27
PCNAP12004 MIR4754-201ENST00000582477 89 ntBASIC13.34□□□□□ -0.27
PCNAP12004 PLEKHB2-211ENST00000628582 1297 ntTSL 2 BASIC13.34□□□□□ -0.27
PCNAP12004 CWC27-201ENST00000381070 2078 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
PCNAP12004 GNG12-AS1-201ENST00000413628 2058 ntTSL 2 BASIC13.34□□□□□ -0.27
PCNAP12004 DLGAP1-203ENST00000400147 5258 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
PCNAP12004 DLGAP1-206ENST00000400155 5257 ntTSL 2 BASIC13.34□□□□□ -0.27
PCNAP12004 AC245140.2-201ENST00000624054 1939 ntBASIC13.34□□□□□ -0.27
PCNAP12004 CHI3L1-201ENST00000255409 1792 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
PCNAP12004 ZNF286B-205ENST00000545289 5328 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
PCNAP12004 MDM1-201ENST00000303145 2918 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
PCNAP12004 CDCA3-202ENST00000422785 2760 ntTSL 2 BASIC13.34□□□□□ -0.27
PCNAP12004 GPN3-201ENST00000228827 1468 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
PCNAP12004 RCC2P5-201ENST00000492126 1487 ntBASIC13.34□□□□□ -0.27
PCNAP12004 SRSF1-205ENST00000582730 3117 ntTSL 2 BASIC13.34□□□□□ -0.27
PCNAP12004 ALPP-201ENST00000392027 2971 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
PCNAP12004 DCAF6-201ENST00000312263 3186 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
PCNAP12004 EXOC3-201ENST00000315013 2682 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
PCNAP12004 FTSJ1-203ENST00000396894 1669 ntTSL 2 BASIC13.34□□□□□ -0.27
PCNAP12004 DUOXA1-205ENST00000558422 1678 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
PCNAP12004 C1orf167-202ENST00000433342 4545 ntAPPRIS P5 TSL 5 BASIC13.34□□□□□ -0.27
PCNAP12004 GALNT16-201ENST00000337827 5708 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
PCNAP12004 NAALADL1-201ENST00000340252 2376 ntTSL 5 BASIC13.34□□□□□ -0.27
PCNAP12004 ZNF23-203ENST00000393539 3242 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
PCNAP12004 KIAA1191-202ENST00000393725 2700 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
PCNAP12004 YIPF1-201ENST00000072644 1858 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
PCNAP12004 CAP2P1-201ENST00000557743 1390 ntBASIC13.33□□□□□ -0.27
PCNAP12004 ICE1-201ENST00000296564 7927 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.27
PCNAP12004 PES1P2-201ENST00000449745 1735 ntBASIC13.33□□□□□ -0.27
PCNAP12004 UNC13D-201ENST00000207549 4393 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
PCNAP12004 FCRL1-207ENST00000491942 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
PCNAP12004 IKBKE-201ENST00000578328 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
PCNAP12004 MRPS10-201ENST00000053468 2110 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
PCNAP12004 FETUB-207ENST00000450521 1410 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
PCNAP12004 PTPRK-207ENST00000368226 6087 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
PCNAP12004 PTPRK-204ENST00000368210 5025 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
PCNAP12004 KPNA4-201ENST00000334256 8981 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
PCNAP12004 HTR3A-201ENST00000299961 1994 ntTSL 2 BASIC13.33□□□□□ -0.28
PCNAP12004 SETD1B-204ENST00000619791 5901 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
PCNAP12004 FAM13B-203ENST00000425075 3098 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
PCNAP12004 GTF2F1-201ENST00000394456 2731 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
PCNAP12004 RPS16-202ENST00000339471 643 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
PCNAP12004 PDLIM5-203ENST00000359265 1189 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
PCNAP12004 FAM213A-204ENST00000372188 829 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
PCNAP12004 APRT-201ENST00000378364 947 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
PCNAP12004 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
PCNAP12004 LINC00265-2P-201ENST00000413372 782 ntBASIC13.33□□□□□ -0.28
PCNAP12004 PPP1R2P4-201ENST00000424051 595 ntBASIC13.33□□□□□ -0.28
PCNAP12004 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC13.33□□□□□ -0.28
PCNAP12004 AL133466.1-201ENST00000447582 150 ntBASIC13.33□□□□□ -0.28
PCNAP12004 AC108462.1-201ENST00000457467 850 ntTSL 3 BASIC13.33□□□□□ -0.28
PCNAP12004 RN7SL788P-201ENST00000460504 316 ntBASIC13.33□□□□□ -0.28
PCNAP12004 LRRC75A-AS1-209ENST00000481027 1016 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
PCNAP12004 RN7SL67P-201ENST00000492147 296 ntBASIC13.33□□□□□ -0.28
PCNAP12004 YIF1A-210ENST00000496746 667 ntTSL 2 BASIC13.33□□□□□ -0.28
PCNAP12004 AC095040.1-201ENST00000513286 675 ntBASIC13.33□□□□□ -0.28
PCNAP12004 COQ10BP2-201ENST00000513804 724 ntBASIC13.33□□□□□ -0.28
PCNAP12004 RN7SL665P-201ENST00000578793 300 ntBASIC13.33□□□□□ -0.28
PCNAP12004 LRRC75A-AS1-226ENST00000582911 879 ntTSL 5 BASIC13.33□□□□□ -0.28
PCNAP12004 PGPEP1-203ENST00000595066 762 ntTSL 2 BASIC13.33□□□□□ -0.28
PCNAP12004 AC012044.1-201ENST00000603431 297 ntBASIC13.33□□□□□ -0.28
PCNAP12004 MIR6787-201ENST00000616675 61 ntBASIC13.33□□□□□ -0.28
PCNAP12004 LINC01668-201ENST00000635001 513 ntTSL 4 BASIC13.33□□□□□ -0.28
PCNAP12004 C12orf43-202ENST00000445832 2397 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
PCNAP12004 FCHO1-221ENST00000597512 2934 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
PCNAP12004 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC13.33□□□□□ -0.28
PCNAP12004 SVOPL-203ENST00000421622 1653 ntTSL 5 BASIC13.33□□□□□ -0.28
PCNAP12004 LEPROTL1-201ENST00000321250 3173 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
PCNAP12004 LINC01019-201ENST00000505443 3199 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
PCNAP12004 API5-208ENST00000531273 1868 ntTSL 2 BASIC13.33□□□□□ -0.28
PCNAP12004 MCF2L-213ENST00000421756 3560 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
PCNAP12004 LILRB3-201ENST00000245620 2066 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
PCNAP12004 GLIS3-202ENST00000381971 3961 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
PCNAP12004 OS9-203ENST00000389142 2457 ntTSL 5 BASIC13.33□□□□□ -0.28
PCNAP12004 SNED1-201ENST00000310397 8174 ntAPPRIS P2 TSL 5 BASIC13.33□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 113.9 ms