Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 CORO1C-203ENST00000421578 1296 ntTSL 2 BASIC12.17□□□□□ -0.46
ZIC3O60481 LRRC3-AS1-201ENST00000426578 784 ntTSL 3 BASIC12.17□□□□□ -0.46
ZIC3O60481 EMP1-203ENST00000431267 1039 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
ZIC3O60481 C17orf58-202ENST00000449250 1082 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
ZIC3O60481 AC078785.1-204ENST00000460707 764 ntTSL 3 BASIC12.17□□□□□ -0.46
ZIC3O60481 AC024293.1-201ENST00000467930 498 ntBASIC12.17□□□□□ -0.46
ZIC3O60481 UBR5-AS1-202ENST00000520820 800 ntTSL 2 BASIC12.17□□□□□ -0.46
ZIC3O60481 AC003982.2-201ENST00000536933 365 ntTSL 3 BASIC12.17□□□□□ -0.46
ZIC3O60481 SLC25A3-206ENST00000547534 556 ntTSL 2 BASIC12.17□□□□□ -0.46
ZIC3O60481 AC025154.2-203ENST00000550214 1031 ntTSL 2 BASIC12.17□□□□□ -0.46
ZIC3O60481 AL137779.3-201ENST00000553295 729 ntBASIC12.17□□□□□ -0.46
ZIC3O60481 AC137723.1-201ENST00000584705 709 ntTSL 3 BASIC12.17□□□□□ -0.46
ZIC3O60481 AC061992.1-201ENST00000592569 777 ntTSL 3 BASIC12.17□□□□□ -0.46
ZIC3O60481 AL160191.2-201ENST00000603975 601 ntBASIC12.17□□□□□ -0.46
ZIC3O60481 PDCD6-213ENST00000618970 931 ntTSL 3 BASIC12.17□□□□□ -0.46
ZIC3O60481 SMYD5-209ENST00000629411 246 ntTSL 5 BASIC12.17□□□□□ -0.46
ZIC3O60481 OSMR-AS1-204ENST00000636516 850 ntTSL 5 BASIC12.17□□□□□ -0.46
ZIC3O60481 ALDOA-229ENST00000636698 420 ntTSL 3 BASIC12.17□□□□□ -0.46
ZIC3O60481 ADH1B-207ENST00000639454 1210 ntTSL 5 BASIC12.17□□□□□ -0.46
ZIC3O60481 SYNPR-209ENST00000478300 2709 ntAPPRIS P4 TSL 1 (best) BASIC12.17□□□□□ -0.46
ZIC3O60481 ELF4-201ENST00000308167 4165 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
ZIC3O60481 ELMOD3-201ENST00000315658 2685 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
ZIC3O60481 CNMD-203ENST00000448904 1444 ntAPPRIS ALT1 TSL 1 (best) BASIC12.17□□□□□ -0.46
ZIC3O60481 AC087386.2-201ENST00000623212 4637 ntBASIC12.17□□□□□ -0.46
ZIC3O60481 SLC45A2-201ENST00000296589 1772 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
ZIC3O60481 IP6K2-201ENST00000328631 1775 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
ZIC3O60481 CPA5-203ENST00000461828 1794 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
ZIC3O60481 UBA5-202ENST00000356232 3705 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
ZIC3O60481 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
ZIC3O60481 MTHFSD-204ENST00000546093 2451 ntTSL 2 BASIC12.17□□□□□ -0.46
ZIC3O60481 AC239798.2-201ENST00000415338 3540 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
ZIC3O60481 GID4-201ENST00000268719 4237 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
ZIC3O60481 ALCAM-201ENST00000306107 4701 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
ZIC3O60481 CREB3L4-204ENST00000368603 1557 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
ZIC3O60481 ZNF691-201ENST00000372502 1910 ntAPPRIS ALT2 TSL 2 BASIC12.17□□□□□ -0.46
ZIC3O60481 AGPAT3-205ENST00000398063 5767 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
ZIC3O60481 PIK3R5-219ENST00000616147 4377 ntTSL 5 BASIC12.17□□□□□ -0.46
ZIC3O60481 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
ZIC3O60481 PRAME-214ENST00000543184 2758 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
ZIC3O60481 SERPING1-202ENST00000340687 1719 ntTSL 5 BASIC12.17□□□□□ -0.46
ZIC3O60481 MAGEC3-205ENST00000544766 1707 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
ZIC3O60481 PCDHA6-201ENST00000378126 3267 ntBASIC12.17□□□□□ -0.46
ZIC3O60481 CNKSR2-203ENST00000425654 5668 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
ZIC3O60481 AL109809.1-201ENST00000418979 1367 ntBASIC12.17□□□□□ -0.46
ZIC3O60481 JMJD6-203ENST00000445478 5303 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
ZIC3O60481 EIF5-202ENST00000392715 3417 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
ZIC3O60481 RIC1-204ENST00000418622 6658 ntTSL 5 BASIC12.17□□□□□ -0.46
ZIC3O60481 SRPRA-201ENST00000332118 3069 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
ZIC3O60481 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
ZIC3O60481 SELENON-201ENST00000354177 4227 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
ZIC3O60481 ROBO4-201ENST00000306534 4710 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
ZIC3O60481 CEACAM20-204ENST00000617951 2034 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
ZIC3O60481 TRIM25-201ENST00000316881 5734 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
ZIC3O60481 ARAF-201ENST00000290277 2504 ntAPPRIS ALT1 TSL 1 (best) BASIC12.16□□□□□ -0.46
ZIC3O60481 TMCC3-201ENST00000261226 5877 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
ZIC3O60481 ARMC5-205ENST00000563544 3549 ntAPPRIS ALT2 TSL 2 BASIC12.16□□□□□ -0.46
ZIC3O60481 PPP1R8-203ENST00000373931 2651 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
ZIC3O60481 SRL-202ENST00000537996 1814 ntTSL 2 BASIC12.16□□□□□ -0.46
ZIC3O60481 GPT2-201ENST00000340124 3984 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
ZIC3O60481 IWS1-201ENST00000295321 2958 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
ZIC3O60481 FAM200A-202ENST00000449309 2480 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
ZIC3O60481 ATG9A-201ENST00000361242 3130 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
ZIC3O60481 VDAC2-202ENST00000313132 1467 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
ZIC3O60481 KDM2B-202ENST00000377071 4595 ntAPPRIS P4 TSL 1 (best) BASIC12.16□□□□□ -0.46
ZIC3O60481 CLCN7-203ENST00000448525 4151 ntTSL 2 BASIC12.16□□□□□ -0.46
ZIC3O60481 ARHGEF37-201ENST00000333677 4968 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
ZIC3O60481 CCSER2-203ENST00000372088 7657 ntTSL 2 BASIC12.16□□□□□ -0.46
ZIC3O60481 NDRG2-251ENST00000556147 2880 ntAPPRIS P4 TSL 5 BASIC12.16□□□□□ -0.46
ZIC3O60481 TNNI2-201ENST00000252898 678 ntAPPRIS P3 TSL 3 BASIC12.16□□□□□ -0.46
ZIC3O60481 MRPL36-201ENST00000382647 587 ntAPPRIS P1 TSL 3 BASIC12.16□□□□□ -0.46
ZIC3O60481 HNRNPA1P33-201ENST00000421426 561 ntBASIC12.16□□□□□ -0.46
ZIC3O60481 AL512599.1-201ENST00000430724 685 ntBASIC12.16□□□□□ -0.46
ZIC3O60481 AL157392.3-204ENST00000440878 397 ntTSL 3 BASIC12.16□□□□□ -0.46
ZIC3O60481 VDAC1P11-201ENST00000458323 852 ntBASIC12.16□□□□□ -0.46
ZIC3O60481 PRSS46-201ENST00000463091 982 ntAPPRIS P1 TSL 4 BASIC12.16□□□□□ -0.46
ZIC3O60481 REEP5-205ENST00000504247 480 ntTSL 5 BASIC12.16□□□□□ -0.46
ZIC3O60481 AC113391.2-201ENST00000512245 553 ntTSL 4 BASIC12.16□□□□□ -0.46
ZIC3O60481 REEP5-207ENST00000513339 1139 ntTSL 2 BASIC12.16□□□□□ -0.46
ZIC3O60481 FXYD2-205ENST00000528014 672 ntAPPRIS P1 TSL 3 BASIC12.16□□□□□ -0.46
ZIC3O60481 AP000553.2-201ENST00000609038 441 ntBASIC12.16□□□□□ -0.46
ZIC3O60481 LINC00969-253ENST00000625338 804 ntTSL 5 BASIC12.16□□□□□ -0.46
ZIC3O60481 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
ZIC3O60481 CCDC159-209ENST00000588790 1408 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
ZIC3O60481 Z97653.2-201ENST00000623057 1418 ntBASIC12.16□□□□□ -0.46
ZIC3O60481 AADACL4-201ENST00000376221 1575 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
ZIC3O60481 YTHDF3-205ENST00000539294 5163 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
ZIC3O60481 ABCA7-202ENST00000433129 6704 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
ZIC3O60481 GET4-202ENST00000407192 4356 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
ZIC3O60481 PSG8-AS1-201ENST00000425668 1873 ntTSL 2 BASIC12.16□□□□□ -0.46
ZIC3O60481 AMOTL2-212ENST00000514516 4521 ntTSL 2 BASIC12.16□□□□□ -0.46
ZIC3O60481 TRIT1-202ENST00000372818 2034 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
ZIC3O60481 METTL12-203ENST00000532971 2037 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
ZIC3O60481 FBXL16-201ENST00000324361 3411 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
ZIC3O60481 LSM14A-201ENST00000433627 3424 ntAPPRIS ALT1 TSL 1 (best) BASIC12.16□□□□□ -0.46
ZIC3O60481 ZNF501-205ENST00000620116 3382 ntAPPRIS P1 TSL 4 BASIC12.16□□□□□ -0.46
ZIC3O60481 AC064850.1-201ENST00000413279 1398 ntBASIC12.16□□□□□ -0.46
ZIC3O60481 WDR17-205ENST00000508596 4294 ntAPPRIS ALT1 TSL 1 (best) BASIC12.16□□□□□ -0.46
ZIC3O60481 AL031587.5-201ENST00000624344 1849 ntBASIC12.16□□□□□ -0.46
ZIC3O60481 ZNF570-202ENST00000586475 1985 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
ZIC3O60481 BEND3P3-201ENST00000611030 2440 ntBASIC12.16□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 52.8 ms