Protein–RNA interactions for Protein: O43731

KDELR3, ER lumen protein-retaining receptor 3, humanhuman

Predictions only

Length 214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDELR3O43731 RBFADN-204ENST00000568911 5187 ntTSL 2 BASIC13.71□□□□□ -0.21
KDELR3O43731 SLC7A7-201ENST00000285850 2263 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
KDELR3O43731 CCDC175-201ENST00000281581 2487 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
KDELR3O43731 ZNF641-201ENST00000301042 4544 ntTSL 5 BASIC13.71□□□□□ -0.22
KDELR3O43731 PCDHA6-201ENST00000378126 3267 ntBASIC13.71□□□□□ -0.22
KDELR3O43731 RSPH4A-202ENST00000368580 1410 ntTSL 5 BASIC13.71□□□□□ -0.22
KDELR3O43731 NCF2-201ENST00000367535 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
KDELR3O43731 BEND3P3-201ENST00000611030 2440 ntBASIC13.71□□□□□ -0.22
KDELR3O43731 CICP17-201ENST00000418553 2377 ntBASIC13.71□□□□□ -0.22
KDELR3O43731 ZNF568-206ENST00000455427 2378 ntTSL 2 BASIC13.71□□□□□ -0.22
KDELR3O43731 NTSR1-201ENST00000370501 4132 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
KDELR3O43731 ARMC5-205ENST00000563544 3549 ntAPPRIS ALT2 TSL 2 BASIC13.7□□□□□ -0.22
KDELR3O43731 USH1C-201ENST00000005226 2700 ntAPPRIS P3 TSL 5 BASIC13.7□□□□□ -0.22
KDELR3O43731 NDRG4-236ENST00000566192 3265 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
KDELR3O43731 USP51-201ENST00000500968 4407 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
KDELR3O43731 DHX36-213ENST00000496811 6733 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
KDELR3O43731 RGS3-205ENST00000374134 2862 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
KDELR3O43731 SPAAR-203ENST00000636776 1538 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
KDELR3O43731 PTENP1-202ENST00000532280 3996 ntBASIC13.7□□□□□ -0.22
KDELR3O43731 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC13.7□□□□□ -0.22
KDELR3O43731 NGLY1-205ENST00000417874 2062 ntTSL 2 BASIC13.7□□□□□ -0.22
KDELR3O43731 FES-201ENST00000328850 2829 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
KDELR3O43731 AC114271.1-201ENST00000612689 2813 ntBASIC13.7□□□□□ -0.22
KDELR3O43731 PSG8-AS1-201ENST00000425668 1873 ntTSL 2 BASIC13.7□□□□□ -0.22
KDELR3O43731 AC239798.2-201ENST00000415338 3540 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
KDELR3O43731 PGM3-201ENST00000283977 2219 ntTSL 5 BASIC13.7□□□□□ -0.22
KDELR3O43731 SH3BP5L-201ENST00000366472 3861 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
KDELR3O43731 XIRP1-203ENST00000421646 2596 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
KDELR3O43731 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
KDELR3O43731 TMCC3-201ENST00000261226 5877 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
KDELR3O43731 PPFIA4-203ENST00000367240 6434 ntAPPRIS P5 TSL 5 BASIC13.7□□□□□ -0.22
KDELR3O43731 LAS1L-202ENST00000374807 2386 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
KDELR3O43731 PPT1-213ENST00000641319 2388 ntBASIC13.7□□□□□ -0.22
KDELR3O43731 CRYBB3-201ENST00000215855 867 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
KDELR3O43731 C11orf53-201ENST00000280325 1208 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
KDELR3O43731 CALML6-201ENST00000307786 1101 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
KDELR3O43731 LY86-202ENST00000379953 1197 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
KDELR3O43731 CFAP36-203ENST00000403007 759 ntTSL 2 BASIC13.7□□□□□ -0.22
KDELR3O43731 AC114763.1-201ENST00000431985 928 ntTSL 2 BASIC13.7□□□□□ -0.22
KDELR3O43731 AC006372.2-201ENST00000433660 292 ntTSL 3 BASIC13.7□□□□□ -0.22
KDELR3O43731 AL008733.1-201ENST00000440516 469 ntTSL 3 BASIC13.7□□□□□ -0.22
KDELR3O43731 AL135901.1-201ENST00000451812 333 ntBASIC13.7□□□□□ -0.22
KDELR3O43731 IL2RG-204ENST00000456850 540 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
KDELR3O43731 AC078785.1-204ENST00000460707 764 ntTSL 3 BASIC13.7□□□□□ -0.22
KDELR3O43731 MUSTN1-202ENST00000486659 622 ntTSL 2 BASIC13.7□□□□□ -0.22
KDELR3O43731 ALG1L3P-201ENST00000503331 765 ntBASIC13.7□□□□□ -0.22
KDELR3O43731 CHTF8-204ENST00000518041 567 ntTSL 2 BASIC13.7□□□□□ -0.22
KDELR3O43731 TMEM126A-203ENST00000528105 656 ntTSL 2 BASIC13.7□□□□□ -0.22
KDELR3O43731 ANO3-205ENST00000531646 1264 ntTSL 4 BASIC13.7□□□□□ -0.22
KDELR3O43731 AIPL1-210ENST00000576307 1077 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
KDELR3O43731 ETV4-208ENST00000586826 917 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
KDELR3O43731 APOC4-202ENST00000592954 615 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
KDELR3O43731 NMRK2-202ENST00000593949 869 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
KDELR3O43731 NMRK2-204ENST00000599576 691 ntTSL 3 BASIC13.7□□□□□ -0.22
KDELR3O43731 AC006158.1-201ENST00000610661 249 ntBASIC13.7□□□□□ -0.22
KDELR3O43731 LINC00969-253ENST00000625338 804 ntTSL 5 BASIC13.7□□□□□ -0.22
KDELR3O43731 ADH1B-207ENST00000639454 1210 ntTSL 5 BASIC13.7□□□□□ -0.22
KDELR3O43731 HLA-C-210ENST00000640219 976 ntBASIC13.7□□□□□ -0.22
KDELR3O43731 KIF9-208ENST00000452770 2707 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
KDELR3O43731 AL391097.1-201ENST00000432706 1620 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
KDELR3O43731 DAGLB-201ENST00000297056 2897 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
KDELR3O43731 LINC02346-201ENST00000383019 1967 ntTSL 2 BASIC13.7□□□□□ -0.22
KDELR3O43731 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
KDELR3O43731 PSME2-201ENST00000216802 1404 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
KDELR3O43731 CCDC159-209ENST00000588790 1408 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
KDELR3O43731 PLXNB3-209ENST00000538966 6377 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
KDELR3O43731 DDC-201ENST00000357936 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
KDELR3O43731 CLUL1-202ENST00000400606 1943 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
KDELR3O43731 AL162431.2-201ENST00000358073 2424 ntTSL 2 BASIC13.7□□□□□ -0.22
KDELR3O43731 CPA5-205ENST00000466363 2099 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
KDELR3O43731 MICAL1-202ENST00000358807 3645 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
KDELR3O43731 FUT6-205ENST00000527106 2211 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
KDELR3O43731 SFXN3-201ENST00000224807 3089 ntTSL 5 BASIC13.7□□□□□ -0.22
KDELR3O43731 DRG2-202ENST00000395726 1897 ntTSL 5 BASIC13.7□□□□□ -0.22
KDELR3O43731 RBFOX3-203ENST00000580155 1519 ntAPPRIS P2 TSL 2 BASIC13.69□□□□□ -0.22
KDELR3O43731 TRMT1L-201ENST00000367506 4392 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
KDELR3O43731 COQ8A-203ENST00000366779 5523 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
KDELR3O43731 SLC25A29-208ENST00000554912 5169 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
KDELR3O43731 OPRL1-201ENST00000336866 3321 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
KDELR3O43731 CCNE2-205ENST00000520509 3330 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
KDELR3O43731 AC010970.1-201ENST00000445125 1848 ntBASIC13.69□□□□□ -0.22
KDELR3O43731 ALOX15B-201ENST00000380173 2605 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
KDELR3O43731 GAPDHS-201ENST00000222286 1489 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
KDELR3O43731 AC104758.3-203ENST00000562938 2123 ntBASIC13.69□□□□□ -0.22
KDELR3O43731 PXDN-201ENST00000252804 6808 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
KDELR3O43731 BRSK2-202ENST00000382179 3576 ntTSL 2 BASIC13.69□□□□□ -0.22
KDELR3O43731 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
KDELR3O43731 HRH2-202ENST00000377291 2561 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
KDELR3O43731 ZNF501-205ENST00000620116 3382 ntAPPRIS P1 TSL 4 BASIC13.69□□□□□ -0.22
KDELR3O43731 AC125807.2-201ENST00000513358 3514 ntBASIC13.69□□□□□ -0.22
KDELR3O43731 C8G-201ENST00000224181 855 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
KDELR3O43731 PDCD6-201ENST00000264933 1135 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
KDELR3O43731 ANK1-203ENST00000314214 1185 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
KDELR3O43731 SULT1A1-201ENST00000314752 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
KDELR3O43731 OLFML2B-202ENST00000367938 1153 ntTSL 2 BASIC13.69□□□□□ -0.22
KDELR3O43731 CELA2B-201ENST00000375910 923 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
KDELR3O43731 AC016757.1-202ENST00000409376 892 ntTSL 3 BASIC13.69□□□□□ -0.22
KDELR3O43731 PGK1P2-201ENST00000431702 1214 ntBASIC13.69□□□□□ -0.22
KDELR3O43731 KRT18P46-201ENST00000435568 1279 ntBASIC13.69□□□□□ -0.22
KDELR3O43731 VDAC1P11-201ENST00000458323 852 ntBASIC13.69□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms