Protein–RNA interactions for Protein: U3KQ87

Uncharacterized protein, humanhuman

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U3KQ87 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
U3KQ87 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
U3KQ87 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
U3KQ87 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
U3KQ87 AC016575.1-201ENST00000607026 382 ntBASIC18.69■□□□□ 0.58
U3KQ87 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
U3KQ87 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
U3KQ87 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
U3KQ87 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC18.69■□□□□ 0.58
U3KQ87 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
U3KQ87 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
U3KQ87 REST-210ENST00000638187 1334 ntTSL 5 BASIC18.69■□□□□ 0.58
U3KQ87 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
U3KQ87 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC18.69■□□□□ 0.58
U3KQ87 LINC01521-201ENST00000504184 1943 ntBASIC18.68■□□□□ 0.58
U3KQ87 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
U3KQ87 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC18.68■□□□□ 0.58
U3KQ87 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
U3KQ87 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
U3KQ87 AC139530.1-201ENST00000575312 1977 ntBASIC18.68■□□□□ 0.58
U3KQ87 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
U3KQ87 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC18.68■□□□□ 0.58
U3KQ87 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
U3KQ87 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC18.68■□□□□ 0.58
U3KQ87 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC18.68■□□□□ 0.58
U3KQ87 MOB2-207ENST00000614710 705 ntTSL 5 BASIC18.68■□□□□ 0.58
U3KQ87 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
U3KQ87 GCA-201ENST00000233612 1694 ntTSL 2 BASIC18.68■□□□□ 0.58
U3KQ87 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
U3KQ87 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC18.68■□□□□ 0.58
U3KQ87 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
U3KQ87 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
U3KQ87 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
U3KQ87 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
U3KQ87 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC18.67■□□□□ 0.58
U3KQ87 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
U3KQ87 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
U3KQ87 AC060814.1-201ENST00000554326 538 ntBASIC18.67■□□□□ 0.58
U3KQ87 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
U3KQ87 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
U3KQ87 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
U3KQ87 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
U3KQ87 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
U3KQ87 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
U3KQ87 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
U3KQ87 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC18.66■□□□□ 0.58
U3KQ87 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
U3KQ87 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
U3KQ87 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
U3KQ87 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
U3KQ87 RARG-204ENST00000543726 1779 ntTSL 2 BASIC18.66■□□□□ 0.58
U3KQ87 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC18.66■□□□□ 0.58
U3KQ87 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
U3KQ87 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC18.66■□□□□ 0.58
U3KQ87 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
U3KQ87 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC18.66■□□□□ 0.58
U3KQ87 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
U3KQ87 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
U3KQ87 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
U3KQ87 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
U3KQ87 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC18.65■□□□□ 0.58
U3KQ87 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
U3KQ87 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
U3KQ87 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
U3KQ87 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
U3KQ87 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
U3KQ87 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC18.65■□□□□ 0.58
U3KQ87 AL157384.1-201ENST00000445995 2473 ntBASIC18.65■□□□□ 0.58
U3KQ87 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
U3KQ87 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC18.65■□□□□ 0.58
U3KQ87 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
U3KQ87 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
U3KQ87 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC18.64■□□□□ 0.58
U3KQ87 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.58
U3KQ87 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
U3KQ87 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
U3KQ87 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
U3KQ87 KRT18P10-201ENST00000388836 1287 ntBASIC18.64■□□□□ 0.57
U3KQ87 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
U3KQ87 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC18.64■□□□□ 0.57
U3KQ87 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
U3KQ87 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
U3KQ87 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
U3KQ87 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
U3KQ87 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC18.63■□□□□ 0.57
U3KQ87 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC18.63■□□□□ 0.57
U3KQ87 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
U3KQ87 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
U3KQ87 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
U3KQ87 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
U3KQ87 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC18.62■□□□□ 0.57
U3KQ87 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
U3KQ87 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
U3KQ87 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
U3KQ87 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
U3KQ87 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
U3KQ87 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
U3KQ87 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
U3KQ87 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
U3KQ87 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 17.3 ms