Protein–RNA interactions for Protein: Q9Y625

GPC6, Glypican-6, humanhuman

Predicted RBP Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6Q9Y625 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC20.9■□□□□ 0.94
GPC6Q9Y625 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
GPC6Q9Y625 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC20.9■□□□□ 0.94
GPC6Q9Y625 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC20.9■□□□□ 0.94
GPC6Q9Y625 AC233723.2-201ENST00000623798 2106 ntBASIC20.9■□□□□ 0.94
GPC6Q9Y625 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
GPC6Q9Y625 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC20.9■□□□□ 0.94
GPC6Q9Y625 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC20.9■□□□□ 0.94
GPC6Q9Y625 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
GPC6Q9Y625 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
GPC6Q9Y625 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC20.89■□□□□ 0.94
GPC6Q9Y625 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
GPC6Q9Y625 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
GPC6Q9Y625 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
GPC6Q9Y625 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
GPC6Q9Y625 TK2-202ENST00000417693 1046 ntTSL 2 BASIC20.89■□□□□ 0.93
GPC6Q9Y625 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC20.89■□□□□ 0.93
GPC6Q9Y625 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
GPC6Q9Y625 AC079630.1-202ENST00000618127 1840 ntBASIC20.89■□□□□ 0.93
GPC6Q9Y625 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
GPC6Q9Y625 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
GPC6Q9Y625 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
GPC6Q9Y625 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC20.89■□□□□ 0.93
GPC6Q9Y625 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC20.88■□□□□ 0.93
GPC6Q9Y625 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
GPC6Q9Y625 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
GPC6Q9Y625 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
GPC6Q9Y625 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
GPC6Q9Y625 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
GPC6Q9Y625 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
GPC6Q9Y625 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC20.88■□□□□ 0.93
GPC6Q9Y625 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
GPC6Q9Y625 LSM7-203ENST00000585409 512 ntTSL 2 BASIC20.88■□□□□ 0.93
GPC6Q9Y625 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC20.88■□□□□ 0.93
GPC6Q9Y625 AL035685.1-201ENST00000636663 812 ntBASIC20.88■□□□□ 0.93
GPC6Q9Y625 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
GPC6Q9Y625 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC20.88■□□□□ 0.93
GPC6Q9Y625 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
GPC6Q9Y625 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
GPC6Q9Y625 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
GPC6Q9Y625 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
GPC6Q9Y625 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
GPC6Q9Y625 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
GPC6Q9Y625 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
GPC6Q9Y625 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
GPC6Q9Y625 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
GPC6Q9Y625 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC20.87■□□□□ 0.93
GPC6Q9Y625 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
GPC6Q9Y625 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
GPC6Q9Y625 AC239859.2-201ENST00000444165 318 ntBASIC20.87■□□□□ 0.93
GPC6Q9Y625 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC20.87■□□□□ 0.93
GPC6Q9Y625 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC20.87■□□□□ 0.93
GPC6Q9Y625 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
GPC6Q9Y625 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
GPC6Q9Y625 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
GPC6Q9Y625 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
GPC6Q9Y625 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
GPC6Q9Y625 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
GPC6Q9Y625 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC20.86■□□□□ 0.93
GPC6Q9Y625 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
GPC6Q9Y625 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC20.86■□□□□ 0.93
GPC6Q9Y625 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
GPC6Q9Y625 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
GPC6Q9Y625 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC20.86■□□□□ 0.93
GPC6Q9Y625 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC20.86■□□□□ 0.93
GPC6Q9Y625 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
GPC6Q9Y625 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
GPC6Q9Y625 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
GPC6Q9Y625 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
GPC6Q9Y625 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
GPC6Q9Y625 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
GPC6Q9Y625 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
GPC6Q9Y625 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
GPC6Q9Y625 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC20.85■□□□□ 0.93
GPC6Q9Y625 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC20.85■□□□□ 0.93
GPC6Q9Y625 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC20.85■□□□□ 0.93
GPC6Q9Y625 GCA-201ENST00000233612 1694 ntTSL 2 BASIC20.85■□□□□ 0.93
GPC6Q9Y625 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
GPC6Q9Y625 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
GPC6Q9Y625 USF2-207ENST00000595068 1612 ntTSL 5 BASIC20.85■□□□□ 0.93
GPC6Q9Y625 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
GPC6Q9Y625 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
GPC6Q9Y625 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
GPC6Q9Y625 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
GPC6Q9Y625 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
GPC6Q9Y625 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
GPC6Q9Y625 SENP5-202ENST00000419026 973 ntTSL 3 BASIC20.84■□□□□ 0.93
GPC6Q9Y625 MIR4787-201ENST00000607364 84 ntBASIC20.84■□□□□ 0.93
GPC6Q9Y625 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC20.84■□□□□ 0.93
GPC6Q9Y625 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
GPC6Q9Y625 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
GPC6Q9Y625 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
GPC6Q9Y625 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC20.83■□□□□ 0.93
GPC6Q9Y625 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
GPC6Q9Y625 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC20.83■□□□□ 0.93
GPC6Q9Y625 STK25-234ENST00000535007 2459 ntTSL 2 BASIC20.83■□□□□ 0.93
GPC6Q9Y625 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
GPC6Q9Y625 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC20.83■□□□□ 0.93
GPC6Q9Y625 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
GPC6Q9Y625 SNX5-217ENST00000606557 1087 ntBASIC20.83■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 15.6 ms